Liolophura japonica (common chiton): 135476234
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Entry
135476234 CDS
T09976
Name
(RefSeq) telomerase-binding protein EST1A-like
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135476234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135476234
03032 DNA replication proteins [BR:
ljp03032
]
135476234
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
135476234
mRNA cycle factors
Common to processing body (P body) and stress granule
135476234
DNA replication proteins [BR:
ljp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
135476234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
TPR_12
Motif
Other DBs
NCBI-GeneID:
135476234
NCBI-ProteinID:
XP_064612251
LinkDB
All DBs
Position
10:complement(18786928..18818749)
Genome browser
AA seq
1552 aa
AA seq
DB search
MAEEREVVRVTYRDLEEIAHRNKLAASTKAKEVDSSSKDSQKKKTKRPERSIYRPGVSRL
RKVSSSQDESDCKGGEDPSDMPSPTSIKTCSEEEVVGVCTRGVQDLQLRAEEDTPSLGLD
QKKSGADARGKRRRPDIQIYVPKGKLQEKDSEDVPSEIAHDDADSEFSPDPPEQSEEEVL
SPAGSHRRKVNIIKAKERKMCITVVNEDLSSPKSAEPGTGFLKTMIFERGGSGLPSGDSS
NVCLGDYNQGVSDSFSKETSYTSGREEKWTDKSGRGSKTVERPALDGSSMENSTELSDSQ
SKQCQDSPAGKSKRYSLAKRKQRNGNGSNGNGTGENDVADKYAAGKNNETDAESDLQLDE
IDALAPRVLDWSEEVERELGNEDEDVLKESNIKSSSEKVRGKSRNAQRGSGKKGDSSRAA
NRRELSGKQTAKEIPERQHNPSVHAEKPSRGSTNRRSSFDSLTRNPRDGSRHLRGDSDAE
SDITDHQGKRKNRRRRERKRTRSGPGHSSKETGGLKVTVDRNERQVEVEGRNYHKRFDQD
IHSSREHISSDSEFVHSPKGGGILHISMATDVHGNRGGHSHRHERSNDERQRSHEHLSSR
GDKRAPRTAREGSRGGSGQRTLFDPSNPLKPIIIQSAGPKLHMKDSGQSSPHMPVPYESY
GQPYPMGPPCPSYGRGYPEAQYPHYPMGNPDQYYYSYPGMFEESSHCRDDTYAKDPYYHS
GYDPDYVIGGMSRSQCTAMADLILRDAGPLDCQLSNILSRRIHSDGEHLLDKLRHDLKTK
YEQVILLDPDLSNKHNVEQLLWKNVYYQVIEIYRRRLGDEEDEDTRTDLLTVLDEATVFY
ESLLQKLQHTYSFRLDLFLDMACPAPENLSRAVKLALLSAQRTMICLGDIARYREQALGK
MNYGKARSWYMKAQQIAPKNGRPYNQLAILALYTKRKLDAVYYYMRSLAASNPFLTARES
LMSLFDEARKKAEATEQKRHEEKEKLRKWRRRREKEGPRIEIWISADGHSEAGQVEENYE
EDLNQMTPVELNKRLSLSFLNAHGKLFTKIGMERFDEVCGLLMREFQAVLARRPTVISNN
RLVQLMAMNMFAVDNTALKGERIDANCRSLLQEHAVQQGLEMFALLASQFATLLSTHIET
KDYPSRLFNDDLHQLVSSIKVWSDWMLCHPTLWNPEPSVNDPETSIKIDVWKEVAEMFNV
LKEVDISHVKLYKDKKEGCDPVILEEDNALAGFVPLLSAPSEPVFVHATVEKHIAKDCLR
IQKLQTFADYLCGIEPPMLAYNVETRQYYSVAPSVEYSEQETESKDRDEPDDDDVIIESE
EEIETGEEGEHRVRELRAKKQELERRVQEQVKQKENVEAILEKHRHRAIELQVCPVFLVP
DTNCFINYLTALKKLVNSKKFTLVVPLVVINELDGLTKGGLRGHPNDVAHQQHMTFVSNH
AKQAVQLLENEFEKRNPHLKALTSKGSTLETISFRSEETDGSGVNDDLILSCCLHYCKDV
ARDFMPKSRDTPIRLQRDVVLLTDDRNLRLKAHTRNVPVKDIPSFLKWANIT
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaaagagaagttgtgcgagtcacgtacagagatttggaagaaatcgcacac
agaaacaaactagctgcatcgacaaaagcgaaagaagttgacagttcgtccaaggatagt
cagaagaagaagacaaagcgccctgagaggagcatttacaggccgggagtatcgcgactg
aggaaagtctccagctcacaagatgagagtgattgtaaaggtggagaagaccccagtgac
atgccctcccccacctccattaagacatgctcagaggaggaggtagtaggcgtatgtacc
agaggtgtccaggatctccagctacgggcagaagaggataccccaagcctaggtctggac
caaaagaaatcaggtgcagatgccagaggtaaaaggagacggcccgatatccagatttat
gttcctaaaggcaagctacaggagaaagattctgaggatgtgccatcagagattgcacat
gatgatgccgacagtgaattctctcccgatccacctgaacagagcgaagaggaagtcttg
tctcctgctggctcgcacaggcggaaagtcaacatcatcaaagccaaagagcggaagatg
tgcatcacagtggtgaatgaggatcttagttcccctaagtctgcggaaccgggcacaggg
ttcctgaagactatgatctttgagagaggaggatcggggcttcctagtggggacagcagc
aatgtttgtctgggggattacaaccagggagtgtctgattccttctctaaagagaccagc
tatacatccgggagagaggagaagtggacggataagtctggcagagggagtaaaacagtt
gagaggcccgcattggacggaagctctatggagaattctacagaactgagtgattcccag
agtaagcaatgccaggactctccggcaggaaaatccaagagatactcgctggcaaaacga
aagcagaggaacggaaatggcagcaatgggaatgggactggggaaaatgatgtggcggac
aaatacgcagcaggcaagaacaatgaaacagatgctgaatctgacctccagttggatgag
atcgatgctctggctcccagggtgctggactggagtgaggaagtggagcgagaactaggc
aatgaagatgaggatgttctcaaggaatctaacattaagtcctcttcagaaaaagtacgt
ggaaaatccagaaacgctcagcgaggctcagggaaaaagggagactccagcagagctgca
aacaggcgagagctatcaggaaaacaaaccgccaaagaaatcccagaaaggcagcacaat
cccagtgtacatgcagaaaagccatcaagaggctcgacaaatcgacgatctagctttgat
agcctcaccagaaatccaagggatggtagtcggcatcttcgtggtgacagcgatgctgaa
agtgacattactgatcatcagggaaaacggaagaacagacgacgacgtgaaaggaaaagg
acaaggtcaggcccaggccatagcagcaaggagacagggggattgaaagtgacggttgat
cgcaacgagagacaggtggaagtcgagggccgcaattatcacaagcgttttgaccaggac
attcacagcagcagagagcatatctcatccgactcagaattcgtccattctccgaaagga
ggtggaatcttgcatatatccatggcaacagatgttcatggcaacagaggcgggcacagt
cacaggcatgagagaagcaatgatgaacgtcagagatctcacgaacacctatcgtccagg
ggagataagagagccccaagaactgccagggaaggctcaaggggtgggagtgggcagagg
actttgtttgacccaagtaatccactaaaacccataatcattcagtcagctgggccaaag
ctgcatatgaaagacagtgggcagagttctccacacatgcccgtcccctatgagtcttac
ggccaaccctaccccatggggcctccgtgcccaagttatggcagaggctacccagaagcc
cagtatccccattatcccatgggtaaccctgaccagtattactactcgtacccgggtatg
tttgaggagagcagccactgcagggatgatacatatgctaaggacccttactatcacagt
gggtatgacccggactatgtgattggaggcatgtcccgatctcagtgtacagctatggca
gatctcatcctgagggacgctggaccgttggattgtcagctctccaatatcttgtcaaga
cgaatccatagtgatggcgaacacctcttagacaaactcagacatgatctgaagacaaag
tatgagcaggtgatcctgctggatcctgacctctcaaataaacacaatgtggaacagctg
ctgtggaagaatgtctactaccaagtgatagagatctacaggcgaaggctgggcgatgaa
gaggatgaggacaccaggacagacctgctcaccgtcctggatgaggccacagtattttat
gagagcctcctgcagaagttacagcacacctacagcttccgtctggacctgttcctggac
atggcctgtcctgccccagagaacctgagccgagcagtcaaactggccttactgagtgcc
cagcgcaccatgatctgcttgggtgacattgcccgctacagggaacaggcgctgggcaag
atgaactatggcaaggccaggagctggtatatgaaagcccagcagattgcccctaaaaac
ggacgcccatacaatcagctggctatcttggctctctatacgaagagaaagctggatgcg
gtgtattattacatgaggagcctggccgccagcaatccattcctcaccgccagagagagt
ctcatgtcactatttgatgaggccaggaagaaggcagaggcaacagaacagaagcgccac
gaggagaaggagaagttgaggaagtggcggagacggcgggagaaggagggtcctcgaata
gagatctggatctctgctgacggacacagcgaggcggggcaggtggaagagaactacgag
gaggacctgaaccagatgacccctgtggagcttaacaaaaggttgtccctgagtttcttg
aatgcccatggaaaattgttcaccaaaattgggatggagagatttgatgaggtgtgtggg
ttactgatgcgggagttccaggctgtcctcgcccgaaggccaactgttatttctaacaac
agactggtacagctcatggccatgaatatgtttgctgtggacaatacagctctgaaaggt
gagagaattgacgcaaactgccgttcactattacaagagcatgctgtacagcagggcctg
gagatgtttgccctgctggcatcacaattcgccaccttgctgagcacccacatagaaacc
aaggactaccccagccggctgttcaacgatgacctccatcaactggtgtccagtatcaag
gtgtggagtgactggatgctgtgtcaccccaccctctggaaccctgaaccatctgtcaac
gatccagagacaagtatcaagattgacgtctggaaggaagtggctgagatgttcaatgtg
ctgaaagaggtggacatctctcatgtgaagttgtacaaagacaagaaagaaggctgtgac
cctgtgatactggaggaagacaacgccctggctggttttgtacccctcctgagtgcaccc
tcagagcctgtgtttgtccacgccactgtggagaagcatattgccaaggactgtttgaga
atccagaaacttcagacgtttgcggattacctgtgtggtattgagcctccgatgctggca
tacaatgtggagacgagacagtattactcagtggcgccctctgtagagtacagtgagcaa
gagaccgagtcaaaagacagagatgagcctgatgatgacgatgtgatcattgaaagtgag
gaagagatagagactggggaggaaggggaacacagagtgagagagctgagggccaagaaa
caggagctagagagacgggtgcaggagcaagttaaacagaaggagaatgtagaggctatc
ttggagaagcaccggcatcgtgccatagagctgcaggtctgcccagtgttccttgttcca
gacaccaactgcttcataaactacctgactgcactcaagaaacttgtgaatagtaaaaag
ttcacccttgttgtgcctttggtcgttatcaatgagctagatgggttgacaaaagggggc
ctccgaggtcaccccaacgatgtggctcatcagcaacacatgacatttgtgagtaaccat
gccaaacaggctgttcagctgctagagaatgagttcgagaaacgaaacccccacctcaag
gccctcacttcaaaaggctctactttggagaccatatcattccgcagtgaagaaactgat
ggcagtggtgtcaatgatgacctgatcttgtcctgttgtcttcattactgtaaagatgta
gccagagacttcatgcccaaatctagagacactccaatcaggttacagagggatgtggtt
ttgttgactgatgaccgcaatctgcgtcttaaggcacacaccagaaatgtaccagtcaag
gacatcccttcctttctcaagtgggctaacatcacctga
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integrated database retrieval system
