Liolophura japonica (common chiton): 135477412
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Entry
135477412 CDS
T09976
Name
(RefSeq) LOW QUALITY PROTEIN: 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135477412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ljp03041
]
135477412
Spliceosome [BR:
ljp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
135477412
Complex C
U5 SnRNP specific factors
135477412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Septin
Motif
Other DBs
NCBI-GeneID:
135477412
NCBI-ProteinID:
XP_064613567
LinkDB
All DBs
Position
11:19097652..19147396
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AA seq
987 aa
AA seq
DB search
MDADLYDEFGNYIGPELDSDDDEDEEEDHDDEMADYGGQMDDEEGAMDQDDADDGGDMQV
VLHEDKKYYPTPEEVFGPEVETIVQEEDTQPLTEPIIAPVKKKKFAMAEQDLPSTVYNME
FLADLMDVPGLIRNVTLCGHLHHGKTTFIDALIEQTHPELRATEDKEMRYTDTLFTEQER
GVSIKSSPVTLVMQDSKSKSYLMNLFDTPGHVNFSDEVTAAFRLSDGCVIFVDAAEGVML
NTERLIKHAVQEKMAVTICINKVDRLILELKLPPTDAYYKLRNILDEVNSIISLYAEDTE
NRRVSPILGNVCFASSYYRFCFTLGSFAKIYSDTYGGINEVEFARRLWGDIYFNGRTRKF
TKKPPHSTSQRSFVEFILEPLYKIFAQIIGDVDECLPRLCDELGISLTKEEKKINIRPLL
RLICRRFFGDFTGLVDMCVEHIGSPQDNARSKVEHIYTGDIDTELADAMFACDPDGPLMM
HTTKLYPTQDATSFHVFGRVMSGTLQANQDVKILGENYTLQDEEDSRFGQVGRLWIAESR
YKVEVNRVPAGNWVLIEGIDQPIVKTSTITDVSGNEEAYIFRPLKFNTNSVIKIAVEPVN
PSELPKMLDGLRKVNKSYPLLNTKVEESGEHIVLGTGELYLDCVMHDLRKMYSEIDIKVA
DPVVSFCETVVETSSLKCFAETPNKKNKVTMIAEPLEKGLAEDIENEVVQISWPRKRLGE
FFQTKYDWDLLAARSIWAFGPDVTGPNILVDDTLPSEVDKGLLGAVKDSIVQGFQWATRE
GPLCDEPIRNVKFKILDAVIAQEPIHRGGGQIIPTARRVAYSAFLMATPRMMEPYFFVEV
MAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSMGFETDLRTHTQGQAF
CLSVFHHWQIVPGDPLDKSIIIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFFDDP
MLLELAKQDVMLIPCELSRKSREDSGV
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagatctgtatgacgagttcgggaactacatcggcccagagctagacagtgat
gatgatgaagatgaggaagaagatcatgatgatgagatggccgactacgggggacagatg
gatgatgaggaaggggcgatggaccaggacgatgctgatgatggtggagacatgcaggta
gttcttcacgaggacaagaaatattaccccacccctgaggaggtgtttggtccggaggtt
gagacaattgtacaagaagaagacacccagcctctaacagaaccaatcatcgcaccagta
aagaagaagaaatttgccatggcagagcaagacttaccctccacagtctacaacatggag
tttctggcagacctgatggacgtaccagggttgatcagaaacgtcacactctgcggtcat
ttgcatcatgggaagacaacgtttattgatgctttgatcgagcagacacatcctgagctg
cgagctactgaggataaagagatgcgatacacagacactctcttcactgaacaggagcga
ggtgtcagcattaagtcttcacctgtcactctggtcatgcaggactcgaagagcaaatcc
tacctgatgaacctgtttgacacgccaggtcatgtgaatttctctgacgaggtgacggca
gcgttccgcctcagcgatgggtgtgtcatctttgtggacgcagcagaaggggtgatgctg
aacactgaacgcctgatcaagcatgctgttcaggagaaaatggctgtcaccatctgtatc
aacaaagttgatcgacttatcctagagttaaagctgccaccgacagatgcctactacaaa
ctcaggaatattctggatgaggtcaacagtatcatcagtttgtatgctgaagacactgag
aacagacgagtgtcacccatcctgggcaacgtctgttttgccagctcgtactaccgattc
tgctttaccctgggctcatttgctaagatctactccgacacctacggaggtatcaacgaa
gtggaattcgcacgaagactttggggcgatatctattttaatggaagaacgagaaagttc
acaaagaagccgccgcacagcacctcacagagaagctttgtggaattcattctagagcct
ctgtacaagatatttgcgcagatcataggagatgtggatgagtgcttgccacgactttgt
gatgaattgggcatctcactgacgaaggaagagaagaaaataaacattcgcccgctttta
cgactgatttgtcgtaggttctttggggattttacaggattggtggatatgtgtgtggag
cacattgggtcaccgcaagacaacgcccgtagcaaagtcgagcacatctacacaggagac
atcgacacagagctggctgatgccatgtttgcttgtgatcctgatggacctctcatgatg
cacacgacaaagctgtacccaacacaggacgccacaagttttcacgtgtttggtcgtgtg
atgagcggaacgcttcaggccaatcaggatgtgaagattctcggggagaactacacatta
caagatgaggaggactcacgatttggtcaggtcggcagactctggatcgccgagtcaagg
tacaaagtggaggtgaatcgagtgcctgcggggaactgggtgctgattgagggcatcgac
caacccattgtgaaaacctccaccattacagatgtgtctggcaatgaagaggcatacata
tttcgtccactaaagttcaacaccaactctgtcatcaaaatagctgtggagcctgtgaac
ccgtcagagttgccaaagatgttggatggactgaggaaggttaacaagagttatcccctc
ttgaatacaaaggtggaagagtccggggagcatattgtgctggggacaggagagctctac
ctggactgtgttatgcatgatctgaggaaaatgtactctgagatagatataaaagtagca
gatccagtggtatcattttgtgagactgtcgtggaaacatcatcgctaaaatgttttgca
gaaactccaaacaaaaagaacaaggtaaccatgattgctgagccacttgagaaggggctg
gctgaggacattgagaacgaggtggttcagatttcatggcccaggaagaggctgggcgaa
tttttccagacaaaatacgactgggatttgttggcagccaggtctatctgggcttttggg
ccagatgtgacggggcccaatatcctggttgatgacacgttgccatcagaggttgacaaa
ggattgctgggtgctgtgaaggacagtattgtgcagggctttcagtgggccaccagggag
gggcctctctgcgatgaacccatcaggaatgtgaagtttaaaatccttgatgcagtgata
gcccaggaaccaatccacagaggtggtggacagatcattcccacagctaggagagtggcc
tattctgctttcctcatggcgacaccgcgaatgatggagccgtatttctttgtggaggtg
atggcgccagctgattgtgtgtctgctgtctacactgtcctggccaggcgaagaggtcac
gttacccaggatgcacctgtaccaggttccccgctgtacaccatcaaggcattcattcct
gccatagactccatggggtttgaaacggacttgcgaactcacacccagggccaggccttc
tgtctgtctgtcttccaccattggcagattgtacccggtgacccgctggacaaaagcatc
attatccgtcctctggagcctcagccagccacacacctggccagggagttcatgatcaag
acacgcagacgcaagggtctcagtgaagacgtcagcatcaacaaattctttgacgatcct
atgttgttggaattggctaagcaggatgtgatgcttatcccatgtgaattgtctcgcaag
tcgcgtgaagacagcggtgtctaa
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