Liolophura japonica (common chiton): 135481003
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Entry
135481003 CDS
T09976
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp04137
Mitophagy - animal
ljp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135481003
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
135481003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135481003
04121 Ubiquitin system [BR:
ljp04121
]
135481003
Enzymes [BR:
ljp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135481003
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
135481003
Ubiquitin system [BR:
ljp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
135481003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
TRAF_BIRC3_bd
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_6
DUF641
TRAF2_zf
Motif
Other DBs
NCBI-GeneID:
135481003
NCBI-ProteinID:
XP_064617003
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All DBs
Position
13:complement(24248221..24260160)
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AA seq
560 aa
AA seq
DB search
MATGRGEEQCDASIITPTTDGHGGYPVEIFPASFDDKFKCNYCNLILKDPLQGFCGHRFC
KSCIQYVQQLSEREKKPVKCQACLADGSPDEEYITLRSEQMFPDNAVKREMANVSVVCAN
KPCNWKGPFKQYVVNVYTLQKHDTECPHTPVSCTCGMLIAKSRMTEHLNRECTSRKIACR
YCNQQIVFGQKDDHNAVCPKQPLCCGSCGKKKIPREKMKEHLEKECPNPRLFCPLGCEEM
VEKSKMEQHLKTNTALHLQMIGQKIEAIDQEVRNSLASGGMVRGFETAITELNQRVQGME
EDLRRVVRGGSSLGATGGGDNGAANAQLVERMRHYEELVTVLHGENQRCITALQSIEQQR
QADRQILETYEQKIRTLERVVALKDVMISEMDLRLLSVELASYDGTLCWKISDFSRKRQD
AITGRTTSIYSPAFYTERMGYKMCARLYPNGDGMGKGSHLSLFFVLMRGHYDSLLKFPFK
QKVTLMLLDQSGRDNPENVVDAFRPDPSSSSFKRPSTEMNIASGCPLFMPLQQLDAAVGK
YLKDDTIFIKVIVDCPGAGK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggccacaggacgaggtgaagagcaatgcgacgcctccataatcaccccaactacagat
gggcatggaggttacccagtggaaattttccctgcgagctttgatgataaattcaagtgt
aactactgcaatcttatactgaaagacccattacagggcttctgcggtcatcgcttctgc
aaatcttgtatacagtatgttcagcagctgagtgagagagagaaaaagccagtgaagtgc
caggcatgtttggccgatggcagcccggacgaagaatatatcacactcagatcagaacag
atgttccctgacaatgctgtgaagagagagatggccaatgttagcgttgtgtgtgccaat
aagccgtgcaattggaaaggacctttcaaacaatatgtcgtgaatgtctataccctgcag
aaacacgatactgaatgtccccacacacctgtctcttgtacctgtgggatgttgatcgcc
aagtcacggatgactgaacacttgaacagggaatgcacctcacggaaaatagcttgtaga
tattgcaaccagcagatagtctttggacagaaagacgaccataacgcagtctgtcccaaa
cagcctctctgctgcggcagctgtggcaagaagaagattcccagggaaaagatgaaagaa
catttagagaaagaatgtccaaaccctcgacttttctgtccactgggctgtgaagaaatg
gtggagaaatctaaaatggaacagcacctgaagaccaatacagcgcttcatttgcagatg
attggtcagaaaattgaagcgatcgaccaagaggtccgaaacagtttggcctcaggaggg
atggtcagaggttttgagactgccatcacagagctaaatcagagagtccaggggatggaa
gaggatttacgaagagtagtaaggggagggtcatcactaggcgcaacaggaggcggggac
aacggagcagctaatgcacaacttgttgagcgtatgaggcactacgaagaactcgtgact
gtgctgcatggggaaaaccagcgctgcatcacagcattgcagagtattgaacaacagcga
caggctgacagacagattctcgaaacgtacgagcagaaaatccgcacgctcgagagagtg
gttgctctgaaagatgtcatgatttcagagatggacttaaggctattgtccgtggaactg
gcgagctatgacggaacgctctgctggaaaatttctgacttcagccgaaaacgtcaggat
gctattacgggcagaacgaccagtatctattcgccggcgttctacacagagcgtatgggc
tacaaaatgtgtgcacgtctgtacccaaacggtgatgggatggggaaaggttctcatctg
tccttgtttttcgtcttgatgaggggccactatgactcgttgctaaaattcccctttaag
cagaaagtaacgctgatgttacttgatcagtcaggacgagacaacccggaaaacgtagtg
gacgccttccgtccagacccttcgagctcctcattcaagaggccgagcacggaaatgaac
attgccagtggctgcccgcttttcatgccgctccaacagctggacgctgcagtgggcaaa
taccttaaggatgacaccatcttcatcaaggtcattgtagactgcccaggagctgggaaa
tga
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