Legionella jordanis: NCTC11533_00068
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Entry
NCTC11533_00068 CDS
T06275
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ljr
Legionella jordanis
Pathway
ljr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ljr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC11533_00068 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljr03400
]
NCTC11533_00068 (nth)
Enzymes [BR:
ljr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC11533_00068 (nth)
DNA repair and recombination proteins [BR:
ljr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC11533_00068 (nth)
Prokaryotic type
NCTC11533_00068 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Ogg-HhH
RecR_HhH
HHH_5
HHH_8
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
VEH11253
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All DBs
Position
1:71365..72018
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AA seq
217 aa
AA seq
DB search
MNKAKRRAIFERFRAQNPHPTTELVYHTPFELLIAVILSAHTTDVSVNKATMKLFPIANT
PQALLDLGEATLKSYIKSIGLYNNKAKNVIKTCQILVEKHGGQVPDNREDLEELPGVGRK
TANVVLNTAFGQPTMAVDTHIFRVSNRTGIAKGKTPVAVEKELLKHVDKEFLHDAHHWLI
LHGRYVCIARKPKCYQCLICDLCEYKEKNLTPPQLPK
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggccaagcgacgcgccatttttgagcgttttagggcgcaaaaccctcaccct
acgacggaattggtttatcacacacctttcgaattgctcatcgctgtgattttatccgca
catacaacagacgtcagcgtcaataaagctacaatgaaattgttccctatagcaaatacc
ccccaagcccttttagatttgggggaggcgacgcttaaatcctacatcaaatcgattggc
ctttataataataaagccaaaaatgtaattaaaacctgtcagattctggtcgaaaaacat
ggtggccaagtgcccgataatcgggaggacttggaggaacttcctggcgtaggccgtaaa
actgctaatgtcgtcttgaatacagcctttggtcagcccaccatggcagtcgatacgcat
atttttcgtgtgtcaaaccgcacgggtattgctaaaggcaaaactcccgtggccgtagaa
aaagaattattaaaacatgtggataaggagtttttgcatgatgctcaccactggcttatt
ctccatggtcgctatgtgtgcatagctcgtaaaccgaaatgctaccaatgtctcatctgt
gatctttgtgaatataaagaaaagaacttaactcctccccaattgccaaaataa
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