Leuconostoc koreense: FGL74_07345
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Entry
FGL74_07345 CDS
T10571
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
lkn Leuconostoc koreense
Pathway
lkn03030
DNA replication
lkn03410
Base excision repair
lkn03420
Nucleotide excision repair
lkn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lkn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FGL74_07345 (ligA)
03410 Base excision repair
FGL74_07345 (ligA)
03420 Nucleotide excision repair
FGL74_07345 (ligA)
03430 Mismatch repair
FGL74_07345 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lkn03032
]
FGL74_07345 (ligA)
03400 DNA repair and recombination proteins [BR:
lkn03400
]
FGL74_07345 (ligA)
Enzymes [BR:
lkn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
FGL74_07345 (ligA)
DNA replication proteins [BR:
lkn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FGL74_07345 (ligA)
DNA repair and recombination proteins [BR:
lkn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
FGL74_07345 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FGL74_07345 (ligA)
MMR (mismatch excision repair)
DNA ligase
FGL74_07345 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FGL74_07345 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
Nlig-Ia
HHH_5
BRCT
DNA_ligase_ZBD
HHH
PTCB-BRCT
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QEA59525
LinkDB
All DBs
Position
1438072..1440114
Genome browser
AA seq
680 aa
AA seq
DB search
MLPDFTPIEKLTTKDAQQETARLQKQLVQYGTAYYEEDAPLVEDYIYDALYARLAALEEK
FPQYVTPDSPTQNVGSADTKAELQKVVHPAPMLSLGDVFSLDELNDWDARTTKSLGNQAS
YNLELKIDGLAVALTYVDGELVQASTRGNGIVGEDVTANVKTIKAIPKKLTEPLTIEVRG
EIYMPKASFAALNKQREADGLEPFANPRNAAAGSLRQLNVKITKSRNLSAFVYYTAEPEI
LGVTTQSGALERFAELGLPTDTHNRVIHKMADIADYIAKYTSERESLSYGIDGVVVKVNQ
LDLQFDLGHTVKIPRWAIAYKFPPEEALTIVRDIEWTVGRTGAVTPTAVMDPVLLAGTTV
QRASLHNPDYLMEKDIQIGDTVTLHKAGDIIPEIGQVILDKRPTDSETYHIPTKCPACDS
NLVHIEGEVALRCINPFCSAQIQEGLTHFASRNAMNIDGMGPRVVGQLLKAGYIKDVAAI
YRITVEQLLTLDKFQEKSAVKLIDAINNSKENSLERLLFGLGIRMVGAKAARLIAEKFRT
LSAVSKASVEDIANINGIGQTIAESIVQYFSTPESQQLLVELDSSGVNQLYLSDTVIDEN
SFFYGKKVVLTGKLEQSSRPAATKWLQDHGANVAGSVSVKTDLVIAGEAAGSKLDKANQL
GITVWTEQQFVDEQVKEDGK
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgttaccagattttacgccaattgaaaaattaacaacaaaagacgcgcagcaagaaacc
gcgcgattacaaaagcaactagtacaatatggcacagcctattatgaagaagatgcacca
ctagttgaggactacatttacgatgcattatatgcgcgattagctgcgttagaagaaaaa
ttcccacaatatgtgaccccggattcaccgacacagaatgttggtagcgcagataccaag
gctgaattacaaaaagtagtacatcctgcaccgatgttatcgttaggtgatgtatttagc
ttggatgaacttaatgactgggatgcaagaacaaccaagtcgcttggaaaccaagcatct
tataatttagagttgaaaattgatggattagcagttgccttgacctatgttgatggggaa
cttgtacaagcttctacacgtgggaatggtatcgttggtgaggatgttacagcgaatgta
aaaacaattaaggcaatacccaaaaagttgactgaaccattaaccatcgaggtacgtgga
gaaatctatatgcctaaagctagttttgctgctctaaataagcagcgggaggctgatggt
ctagaaccatttgctaaccctcgtaatgctgccgccggttccttgcgtcaattaaacgtt
aaaattactaagtcacgaaacttatcagcttttgtatactatacagctgaacctgaaata
ctcggagtaacaactcaaagtggtgcgttagagcgatttgcagaattaggtctgccaaca
gacacacacaatcgtgtcattcataaaatggcagatatagctgactatattgctaagtat
acctcggagcgtgaaagcttgtcttatggtatcgatggtgtcgtcgtcaaagtgaatcaa
ctagacttacagtttgacttaggacatacagttaaaattccacgttgggctatcgcttat
aaattccctccggaagaagccttaacaatcgttcgtgacattgaatggactgtcggacga
actggggcggtaacacctactgcagttatggatccagttttgttagcaggtaccactgtg
caacgcgctagcctgcataatcctgattatttaatggaaaaggatattcaaattggtgat
acggttacgctacacaaagcaggtgatatcattccagaaatcggacaagtcattttagac
aaacgtcctacagacagtgaaacttatcatattccgacaaaatgtcctgcctgtgactcc
aatttagttcatattgaaggtgaggtagcactccgctgtattaatccattctgttcagct
caaattcaagaaggattaacacattttgcatcaagaaatgcgatgaatattgatggcatg
ggaccaagggttgtcggtcaactattaaaggcaggctatattaaagacgtagctgccatt
tatcgcataacggttgaacaattactaacgttagataagtttcaagaaaaatcagctgtg
aagttaattgatgcaattaataattcaaaggaaaattctcttgaacgcttattatttggt
ttaggaattcgcatggttggtgcaaaagcggctcgcttgatagcagaaaagttcaggacc
ttatcagctgtttcaaaggcctcggttgaagatatcgcaaatatcaatgggattggtcag
acaattgccgagtcaattgtacaatactttagtacaccagaatctcagcaactacttgtc
gaactagattcttctggtgttaatcaattatatttatctgacacagtgattgacgaaaat
tcatttttttatggtaaaaaggtagtcttaactggtaaactagaacaaagtagtcgccct
gctgcaacaaaatggttgcaagatcatggcgctaatgtcgccggatcggtgtcagtaaaa
acagacttagttattgcaggagaagctgcaggtagtaaactggataaagccaatcaatta
ggtattacagtttggaccgaacaacagtttgttgatgaacaagtaaaagaggacggaaaa
taa
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