Lepidochelys kempii (Atlantic ridley): 140902822
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Entry
140902822 CDS
T11378
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp00310
Lysine degradation
lkp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
140902822 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lkp03036
]
140902822 (SETDB1)
Enzymes [BR:
lkp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
140902822 (SETDB1)
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
140902822 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
140902822 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
Motif
Other DBs
NCBI-GeneID:
140902822
NCBI-ProteinID:
XP_073179436
LinkDB
All DBs
Position
24:7494772..7521847
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AA seq
1321 aa
AA seq
DB search
MIHVLYMDGCVGSSLGLFSSKMDSPEVTELQQEVMEELGISMEELQQFIDEELEKFECVK
QRKQQLEELEKSVEQKEAEVAYVDQLFNDASRAIGKCEILVKDLYSKLGLQYRESSSEDE
DSASKPMEVIEIPDEDDDDVMSIDSGWKRSETSNRISKDQTLLREAMAAMRKSAQDVQKF
MEAVNKKTNAQDLQKDGLSSPPSSVGASQQVSSALAGGDLSNDGDLVVGMRILGKKRTKT
WHKGILIAIQAVGAGKKFKVKFDNKGKSLLSGNHIAYDYHPSAEKLYVGSRVVAKYKDGN
QVWLYAGIVAETPNMKNKLRFLIFFDDGYASYVTQSELYPICRPLKKTWEDIEDVSCRDF
IEEYISAYPNRPMVLLKSGQLIKTEWEGTWWKSRVEEVDGSLVKILFLTDAVNVTMFSLP
QDDKRCEWIYRGSTRLEPMFSMKTSTASTLEKKQGGQMRTRPNVGAVRSKGPVVQYTQEL
TGTSPQFKPIEQVQAMSLAAPSVSPQPAEMESPESQLAQSRKQVAKKSTSFRPGSVGSGH
SSPVSPVLSETPPMGKAAVNQQYRGSYSSGQPGSSAVQPFHGMMDRVPNEPSYRAPMEKL
FYLPHVCSYTCLSRVRPIRSDQYRSKNPLLIPLLYDFRRMTARRRVNRKMGFHVIYKTPC
GLCLRTMQEIERYIFETDCDFLFLEMFCLDPYVLVDRKFQPYKPFYYIADITKGKEDVPL
SCVNEIDTTPPPQVAYSKERIPGKGVYINTGWEFLVGCDCKDGCRDKSKCACHQLTVQAT
GCTPGGQINPNSGYQHKRLEECLPTGVYECNKRCKCNTNMCTNRLVQHGLQVRLQLFKTQ
NKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYE
SDAKCSSDSSGVDLKDEEEENTGTEEQDESNEDSSDDNFCKDEDFSTSSVWRSYATRRQT
RGQKENGLSETASKDSGLTRQISHDEVAVTAACKLPVSEETSKNKVASWLSSNSMSDSFQ
DNDSASSFKMTEASEVKAGKVEVLGDREKPSTSGLGGKEAFGLDADSKMQKKEESEEPNK
LSLASETGKVYGYNPSPMKLEGIRRPPSKTIMHQSKRHLAPPQQAADDVLTLSSSTDSEG
ENGQPAAGQAQGNTNDSDDIQTISSGSEEEDIDDKKNSSSGLGPIKRQVAVKSTRGFALK
STHGIAIKSTNMASADKGENMLVRKNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNL
FVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRL
L
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgatccatgttctctacatggatggatgcgtagggagcagtcttgggttattttcatca
aaaatggattctccggaagtaacagagttgcagcaagaagtgatggaagagttggggatc
tctatggaagagctccagcaattcattgatgaggagctggagaagtttgagtgtgtgaag
cagcggaaacagcagctggaagagctggaaaagagcgtggaacagaaagaagcagaagtg
gcatatgtcgaccagctcttcaatgatgcttcgagagccattggtaaatgcgagatactg
gtaaaagatctctactccaagctgggccttcagtatcgtgagagcagctctgaagatgag
gactcagcttccaagccgatggaagtgatcgaaatcccagatgaggatgacgacgatgtt
atgagtattgattcgggttggaagcgcagtgaaacaagtaacagaatctcaaaggatcag
accctgcttcgagaagccatggctgcgatgaggaagtctgcccaagatgttcagaaattt
atggaagctgttaacaaaaaaacaaatgcccaggacctgcaaaaagatgggctatcctct
cctccgagctctgttggcgcatcccagcaggtgagctctgcgctcgctgggggtgacctc
agcaatgatggtgacctggtggttggtatgcgtatcctaggcaagaaaaggaccaagacg
tggcacaaaggaattttgattgcaatccaggcagtaggtgctggtaagaagttcaaagtg
aaatttgacaacaaagggaagagtttgctttctggcaatcacattgcgtatgactatcat
ccctctgccgagaaactctacgtcggaagccgggttgtggccaaatacaaggatgggaat
caagtctggctctatgctggcatcgtggccgaaacgccaaacatgaagaataaactgagg
ttcctgatcttcttcgatgatggctatgcttcttacgtcactcaatcggagctgtaccca
atctgcaggccattaaagaagacctgggaagacatagaagacgtttcctgtcgtgatttc
atagaggagtacatcagtgcttacccaaaccgtcccatggtattgctgaagagcggccag
ctgattaaaacagaatgggaagggacctggtggaaatccagagtggaggaagtggatggc
agtctggtcaaaatcctcttcctgacagatgctgtgaatgttacaatgttctctctgcca
caggacgacaaacgctgcgaatggatttaccgtggttccacacgtctggagcctatgttc
agcatgaaaacctccacggcctccactctggaaaagaaacaaggagggcagatgaggact
cgtcccaatgttggtgctgtgagaagcaaagggcctgtagtacagtacacgcaagaatta
acaggaaccagtcctcagtttaaacctatagaacaagtccaagcaatgtctctagctgca
ccatctgtttccccacagcctgctgagatggaaagccctgaaagtcagctggctcagtcc
agaaagcaagtggccaagaaaagcacgtccttccgtcctggctctgtggggtctggacac
tcttcacctgtttctcctgtcctaagtgaaactcctcccatggggaaagctgcagtgaac
cagcaatatcgtggaagctattccagtggccagccaggcagcagtgcggtgcagccattc
catggcatgatggatcgggtgcccaatgagccctcgtaccgggccccgatggagaagctc
ttttacctgccccatgtctgcagctacacctgcctgtcgcgggtccgccccatccggagc
gaccagtaccgcagcaagaacccccttctcatcccgcttctctacgacttccggcgcatg
actgcccgccgccgcgtcaaccgcaagatgggcttccacgtcatctacaagacgccgtgt
gggctgtgcctgcgtaccatgcaggagattgagcgctacatctttgagacggactgtgac
ttcctcttcctggagatgttctgcctagacccctacgtgctggtggaccgcaagttccag
ccctacaagcccttctactacattgcagacatcaccaaaggcaaggaggacgtgccgctg
tcctgcgtcaatgagatagacactacccctcctccacaggtggcttatagcaaggagcgc
atcccggggaaaggagtctatatcaacaccggctgggagttcctcgtgggctgcgactgt
aaagatggctgccgagacaaatctaaatgtgcctgccaccagctgacagtccaagcaaca
ggctgcacccccggtgggcagatcaaccccaattctggctaccagcacaagaggctggag
gaatgcctcccaacaggagtctatgaatgtaacaagagatgcaaatgcaacacaaacatg
tgcaccaatcgcttggtacaacatggactccaagtcagactccagctattcaagactcag
aacaaaggctggggaatccgctgccttgatgatattgccaagggctctttcgtctgcatc
tatgcagggaaaatcctgacggacgactttgccgacaaagaagggctggagatgggggat
gagtacttcgccaacctggatcacattgagagcgtggagaacttcaaggagggctacgaa
agcgatgccaagtgctcctccgacagcagtggcgtggacctgaaggatgaagaggaagag
aacaccggcaccgaggagcaggatgagtccaacgaggacagctctgatgacaacttctgt
aaggacgaggatttcagcaccagctcggtgtggcgcagctatgctacccgccggcagacc
cggggccagaaggagaatggcctgtctgagacagcctccaaggactccggcctcaccagg
cagatcagccatgacgaggtcgccgtgaccgccgcctgcaaactacccgtgtctgaggag
acctccaaaaacaaagtggcctcatggctgagctccaacagcatgtcggacagcttccag
gacaatgatagtgcctcctcgttcaagatgaccgaggccagcgaggtcaaggcaggcaaa
gtggaagtcctgggtgaccgagagaagccctccacttctgggcttgggggcaaggaggcc
tttggcttggatgcagactcaaagatgcagaagaaggaggaatctgaagagccaaacaag
ctttcgctggcatctgagacaggcaaggtgtatggctataatccaagccctatgaaactc
gaggggatccggaggccaccaagcaagacgatcatgcatcagagcaaaaggcacttggct
cctccccagcaagcggctgacgatgtgctgacactgtcaagtagcacggacagcgagggg
gagaatggccagccggcagcaggacaagcgcagggcaacacgaatgatagtgatgacatc
cagacgatttcctctggctccgaggaagaggacattgatgataaaaagaattcctcttcc
gggctaggtcccattaaaaggcaagtggcagtgaagtccacacgaggttttgcccttaaa
tcgactcacgggattgccataaagtcgaccaatatggcatcagctgacaagggggagaac
atgctcgtgcgcaaaaacacccgccagttttatgacggcgaagagtcctgctatatcatc
gatgccaaactcgaagggaacctcggccgttacctcaatcatagctgcagccccaatctg
tttgtgcagaatgtttttgtggacacgcatgatctccgtttcccttgggttgccttcttc
gctagcaagaggatacgagccgggactgagctgacctgggattataactacgaggtgggc
agcgtggagggcaaggaactcctgtgctgctgtggagctatcgaatgccgcggcaggctg
ctctag
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integrated database retrieval system
