Lepidochelys kempii (Atlantic ridley): 140903989
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Entry
140903989 CDS
T11378
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03440
Homologous recombination
lkp03460
Fanconi anemia pathway
lkp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140903989 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
140903989 (BRCA1)
03460 Fanconi anemia pathway
140903989 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lkp01009
]
140903989 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lkp04121
]
140903989 (BRCA1)
03036 Chromosome and associated proteins [BR:
lkp03036
]
140903989 (BRCA1)
03400 DNA repair and recombination proteins [BR:
lkp03400
]
140903989 (BRCA1)
Enzymes [BR:
lkp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140903989 (BRCA1)
Protein phosphatases and associated proteins [BR:
lkp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140903989 (BRCA1)
Ubiquitin system [BR:
lkp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140903989 (BRCA1)
Multi subunit type E3
BRCC complex
140903989 (BRCA1)
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
140903989 (BRCA1)
DNA repair and recombination proteins [BR:
lkp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
140903989 (BRCA1)
BRCA1-A complex
140903989 (BRCA1)
BRCA1-B complex
140903989 (BRCA1)
BRCA1-C complex
140903989 (BRCA1)
BRCA complex
140903989 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
140903989 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140903989
NCBI-ProteinID:
XP_073182167
LinkDB
All DBs
Position
27:complement(19068449..19170999)
Genome browser
AA seq
1906 aa
AA seq
DB search
MDSSVAAIGDVQSVLLAMQKNLECPICLELIKEPVSTKCDHIFCRFCMFKLLSKKKKGPA
QCPLCKTEVTKRSLQENPRFKQLIEGLLETIHAFELDTGIKFLNSQDFSKKPVETNSTGL
LGKEGSIIQSKGYRNRQKRIKEQEQESPTLEANAGAQVADNMVRRSSLRNKRQKCESGKA
VYIEFGSDSSEDLFKKAGGCGMGHTKLFQTPPQKGEREEEIKYAEKESESPYNMWPSTSD
AGEILSSDILGECGVSEEDSKGTWNGIEDFEAAQVNVAEGHLKESQGISASNSQAEQRDR
TGNASSLLNEDTSLFHSAEEMDAGETPFSSENKESGLAHSSENQLDKSKKSGNGVQHTEA
VETCQPESNSLHEREPALESLLQPKTLHGNPLSQVSGKRLKRSIQKVNEWFSKSNEMLSS
GSSQDAPAGASDTQDGDSYLSDRESCISEKTDLMVNCTEVVVGCENDRNLSKSTVHNIED
KIFGKTYKRERKSNPLVHTREMPLTPKVEDVTTDMKPSSNSRTSKLKRKRKTASDLQPAD
FIKKRDEKDLKKHSEGVNQCIVGRNVRRKKGGEGSTVVNESPMDVKNGDDISAELSLREG
ESILKNDTEKVTCNSTDGKLAQDTRDRKNTKKMRSSLTKRSRHSARPVCALQLVVDRNSS
CPDQTELQIDSYPSSEEPKKVDSENKRVRRSRRLQLLTEKMTKETRRRSEPNERARKHAS
ESKDSSSGLQMNVLVHVPECKDPDEQQDVLNHSIPLSDTDLKGNALEVDKTPPNPENCSD
GMQTGKGLLYDEISVKDLNACSVVPDTDSQDNENQGSHSLLQPHSTNVDQAACLVQNLSE
NNQCAAFEPKNRELCACSSKTNRHCTENDLESFRNSKSHEAKIISELNTETEDSELETQY
FRNMFRHSKRLSFTLHPSPVKESVTESTASETLRKSGASSVEYRHNNSDLKNEPPYAKKT
LGLDEVCERDEPKTCESAKGISGRSPGIHFSRDTECGHVSDDGKNISQVPDQVQLFSPPR
AATAKIKSRSRSRLQKRRQPKEKRISPEMVIESQLSQNKSNGSLGDQRNIEERISQRTDL
STINETGSNQGVKAEEAENKGPVLNFQPKPVLVYPVVCQQSPAEFSCKVIEKNGYEGECK
QVKSDKEQVSQIASIGVPECLISEEALEQPTEGTSGFPLLSETPDGLLCSADDIKENISI
CEIDRKEISAVFVKTGERASLRELDSGSSSSKSRSQNFVREPRRPAWKLQSSEEDSSEDE
ELPCFQALIFGKLVSTPLQPTEQIMSTVESSSPEEILALLNSSSGNNKAVQKSPGVILRD
TCVSPSQESECSVNLFSSQSNMSEDSTNRLQELKKPITLASCSKEMSSFSGSREASPNGN
EELTGRKTDLEDGHQRDQNVQPNLGEASGYDSEASHQGDSSGLSSQGEILTTQQKDAMQN
NLKELQQEMAVLEAVLEEHGSQDFEFPAPHSELPLSRVEGTLAVGQTRPARGTALISEVN
LENHKISSSKGLSADGFHVMPSDHSNTKNKELEEEGLRLPALQLSHPKSHLFKKEALEQG
HWCPSLWKAKTRSQEGTFQRVGAAVLLEQEAMKPCNRYRLESENAAEQEFGTKLNTAAVP
CGNESRTPNSSPLKFSERLTNCQTAESTNSAAISWNANNGKSTQGCKQERRAFSSASALH
TGVVKENAKSSVVTCRRQMSIVASGLNQSELLLVQKFARKTQSTLSNQITEGTTHVIMKT
DMELVCERTLKYFLGIAGRKWVVSYEWIVQSFKEGKILDEYDFEVRGDVINGRNHQGPKR
ARRSQTGKLFKDFEICCYGPFTDMRTGDLEWMVELCGASVVKQPHLFTHKANSTTVIVVQ
PDAWLENTGYRAIPQKCTAMVTREWVLDSVACYECQEFDTYLVSQS
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atggactcgtctgtggctgccattggagatgtgcaaagtgtgcttttggctatgcagaag
aacttggagtgcccaatatgtttggagttgataaaagagccagtctcaacaaaatgtgac
catatattctgcagattctgtatgtttaaacttctcagcaaaaagaaaaaaggcccagca
cagtgtccactgtgtaagactgaggttaccaaaagaagtcttcaggaaaatccaagattt
aagcagctaattgaagggctactggaaactatccatgcttttgaacttgacactggaatc
aagtttttaaacagtcaggatttttctaaaaaacctgtagaaaccaattctactgggctc
ctggggaaggaaggttccatcatccaaagtaagggctacagaaacagacaaaaaagaatt
aaagaacaagagcaagaaagtcctaccttggaagctaatgctggtgcccaggttgcagac
aacatggtcaggagaagttccctcagaaacaaaaggcagaaatgtgaatctggtaaagca
gtgtacattgaatttggatctgattcttctgaagatctttttaaaaaagcaggtggttgt
ggaatgggacacacaaaattatttcagactccacctcaaaaaggagaacgggaggaagaa
ataaagtatgctgagaaggaaagtgaaagtccatacaacatgtggcctagcacgtcagat
gcaggagaaatactctcatcggatatcttaggtgaatgtggtgtctcagaggaagacagc
aaaggcacttggaatggcatcgaagacttcgaggctgctcaagtgaatgtggctgagggt
catttaaaagagagccagggcatttctgcttcaaactcacaggcagaacagcgtgacaga
acaggcaatgccagctctttactgaatgaggacacaagtttattccacagtgcagaagaa
atggatgctggggaaactccatttagtagtgaaaacaaagagtctggcttagcgcacagc
tcagaaaaccaattagataaaagcaagaagtcaggtaatggtgtccagcatacagaagct
gtagaaacatgtcaacctgagagtaactccctgcatgaaagggaacctgctttggagagt
ctattgcagcccaagactcttcacggcaatcctttgagtcaagtttctgggaaaagactg
aagagaagcattcaaaaagtcaacgagtggttttctaaaagcaatgagatgctctcttct
ggttcctcccaggatgctcctgctggggcatctgacacacaagatggagattcatattta
tcagacagagagtcctgtatttcagagaagactgacctgatggtaaactgcacagaagtt
gtggtgggatgtgaaaatgataggaatttgtcaaaatcaactgtgcataacatagaagat
aaaatatttgggaaaacgtataaaagagagagaaagtcaaaccctcttgtccacacgaga
gagatgccactgactccaaaagtggaagatgttactactgatatgaaaccctcaagtaat
tccagaacaagtaaattaaaacggaaaagaaagactgcctctgatctccaacctgcggac
ttcatcaagaagagagatgaaaaggatctaaagaagcactctgagggtgttaatcagtgc
attgttggtagaaatgttagaaggaaaaaaggtggtgaaggttccactgttgttaatgag
agtcccatggatgtgaaaaatggggacgatatatcagcagaactttccctccgagagggg
gaatccatattgaaaaatgatactgagaaagtaacttgcaacagcactgatggaaagctg
gctcaggatacccgtgaccgaaagaatactaaaaaaatgagaagctcattaacgaaaaga
agcagacattcagctaggcccgtgtgtgctctgcagctggtagtggatagaaactcaagt
tgccctgatcagactgagctgcagattgatagttacccaagtagtgaagagccaaaaaaa
gttgattcagaaaataaacgagtcagacgcagcaggaggcttcagttactgactgaaaaa
atgacaaaagaaaccaggagaagaagtgagccaaacgagagagcaagaaagcatgccagt
gaaagcaaagattcctcctctggattgcagatgaatgtgttggtccatgtccctgaatgc
aaagaccctgatgagcagcaggatgtactgaaccatagcatacctctgtcagacactgat
ctgaagggtaatgccttggaagtagataaaacaccccctaatcctgaaaattgttctgat
gggatgcaaactggaaaaggccttttgtatgacgaaatatcagtgaaggatttaaatgct
tgttctgttgtgcctgatacagattctcaagataacgaaaatcaaggaagccattcactt
ctgcagcctcattccacaaatgtggatcaagctgcctgcctagtgcagaatttgtctgag
aataatcagtgtgctgcattcgagcccaagaacagagagttgtgtgcgtgttcatccaag
actaatagacattgcacagaaaatgacttggaaagtttcagaaactcaaagtcacatgaa
gctaaaatcatttcagagttgaacacagaaactgaagacagtgagctagaaacacagtac
ttccgaaatatgttcagacattcaaaaagactgtcatttacccttcatcctagtccagtg
aaggaatctgtgactgaaagcactgcttctgaaactctaaggaaatcaggtgctagcagt
gtagaatataggcataacaatagtgacttaaaaaatgaacctccatatgctaaaaaaacc
ttgggcctggatgaggtttgtgagagagatgagcctaaaacatgtgaatctgctaaaggt
atttctgggcgtagtccaggaattcacttttccagggacaccgaatgtggacatgttagt
gacgatggcaagaatatttcacaagttccagatcaagtgcagttattctcaccaccaaga
gcagccactgccaagattaagagtaggagcaggagcagactgcaaaaacgaaggcaacca
aaggaaaagagaatttcacctgaaatggtgatagaaagtcaattaagtcagaacaaaagt
aacggaagcctaggtgaccagagaaatatagaagagcgaatttcccaaagaactgattta
agcacaattaatgaaacaggaagcaatcaaggagtaaaagctgaagaagctgaaaacaaa
gggccagtattaaattttcagcccaagccagtgctggtatatcctgtagtttgtcaacaa
agccctgctgaatttagctgcaaagtaattgaaaagaacggttatgaaggggaatgcaaa
caagtaaagagtgataaagaacaagtatcccaaattgccagcataggtgtgcctgagtgc
ttaatttcagaggaggctctggaacagcccactgaaggtactagtggttttccattgctg
tctgagacccctgatggcttattgtgctctgctgatgacattaaagagaacataagcatt
tgtgaaattgataggaaagaaatttctgcggtatttgttaaaacaggtgagagagcctcg
ttaagagaactggacagtggcagcagtagttctaagtctaggtctcaaaactttgttcgg
gaacccagaagaccagcctggaaattgcagtcctccgaggaggattctagtgaagatgaa
gaactaccttgctttcaggcattaatatttggcaaattagtaagcacaccattgcagcct
acagaacagatcatgtctacagtagagtcttcatcaccggaagagattctagcattgctg
aacagtagcagtggcaataataaagctgtacagaaatcgcctggagtcatcttgagagat
acatgtgtttctccaagccaagagtcagaatgctcagttaacttattttcttcccagtcc
aacatgtcagaagattcaaccaatagactacaagagctgaagaagcccataacactagct
tcttgttccaaagaaatgagcagtttcagtggaagcagagaagctagtccaaatggtaat
gaagagctgacaggaagaaaaactgatttggaagatggacaccaacgagaccagaatgtg
caaccaaatttaggtgaagcatccggatatgacagtgaagccagtcaccaaggagattct
tctgggctgtcctcccagggtgagatccttaccacacagcagaaggatgccatgcaaaac
aacttaaaagaacttcaacaggaaatggctgtacttgaggccgtgctggaagagcatgga
agccaggactttgaattcccagccccacacagtgaactgcctctttccagagtggaagga
acactcgcagtgggacaaacgagaccagctagaggaacagcattaatttcagaagtaaat
cttgaaaatcacaaaatcagcagttcaaagggactttcagctgatgggttccatgtaatg
ccaagtgatcattccaacacaaaaaataaagagctagaagaagaaggtttgaggttgcct
gctttacagctttcccatcctaaatcccatctttttaaaaaagaagctctggagcaaggc
cactggtgcccgagcctttggaaagccaaaactcgctctcaggagggcacatttcagcgg
gttggtgcggcagtgctgctggaacaagaggcaatgaaaccatgtaatcggtatagactt
gaatcagaaaatgccgctgagcaggaatttggaacaaagctaaacactgcagctgttccg
tgtgggaatgagagcaggactccaaacagctctcccttgaaattttctgaaagacttaca
aactgtcaaactgcagaatcaacaaatagtgctgccatatcgtggaatgctaataatggg
aagagcactcagggatgtaagcaggagagaagggcattttcctctgcatctgctctgcac
actggagttgtaaaagaaaatgccaaaagctcagttgtgacctgtaggagacaaatgtca
attgtggcatcaggtctgaaccagagtgagcttttattggtgcagaagtttgccaggaaa
acccagagcactttatctaatcaaattactgaaggaacaacccatgtcataatgaaaaca
gatatggagctagtttgtgagcggacactgaagtactttctgggcattgcaggaagaaaa
tgggtagttagctatgaatggattgttcagtcttttaaggaaggaaagatacttgatgag
tacgactttgaagtgagaggagacgtgatcaatgggagaaaccaccaaggccctaagaga
gctagacgatcccagactggaaagctcttcaaagactttgagatctgttgctatggacca
ttcaccgatatgcgcacaggtgatctagagtggatggtggagctttgtggcgcctcagtg
gtgaagcagcctcacctgttcacacacaaagctaactctactactgtaatagttgtacag
cctgatgcttggctcgaaaacacagggtacagagcaatccctcagaagtgtactgccatg
gtgacccgagagtgggttttagacagcgttgcatgctatgagtgccaggagtttgatacc
taccttgtgtcccagtcatga
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integrated database retrieval system
