Lepidochelys kempii (Atlantic ridley): 140907220
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Entry
140907220 CDS
T11378
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 8
KO
K10170
toll-like receptor 8
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
140907220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lkp04054
]
140907220
04090 CD molecules [BR:
lkp04090
]
140907220
Pattern recognition receptors [BR:
lkp04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
140907220
CD molecules [BR:
lkp04090
]
Proteins
140907220
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_1
TIR_2
LRR_9
LRR_12
LRR_Zer-1
LRR_5
Motif
Other DBs
NCBI-GeneID:
140907220
NCBI-ProteinID:
XP_073188761
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All DBs
Position
1:134033281..134039772
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AA seq
973 aa
AA seq
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MVQPLGLFKNLTKLEKLAHSHNHLQEVPKGLSPSITSLELNANKIVSIKNNTFSELKNLK
ELYMDRNCYYSNPCGKTFEIEDQTFVALTNLTVLSLSYNNLTRVPLNLPSSLRELYLGFN
KITRISQGDFNELVNLHLLDLSRNCPRCYNAPFPREPCTIYSSIQIHQFAFQNLNKLKTL
VFTSTSLTSVPAIWFQNMTQLKVLXLAFNYLQNEIVSGKFLRQYLNLXFLQYLNLSQHFS
SLVSLKRLYLKGYVFQDLCEKHLKLLIALKKLNILDLGINFIKRIELAVFQNFSNLTEIY
LTDNRISPFVEDNNXSFRTGWKKGIPNILPSNSGMRRPAEPFSNTKCSSYGKALDLSSNS
LIFINPNQFKSFNDIACLNLSSNDINQAFNGTEFNLTKLKYLDLSNNKLDLAYGFAFNEM
KLLKVLDLTHNKHYFRLAGVTLRLAFIERLPQLKVLNLSWNAISTLTDRQLSSNSLQELV
FKGNCLDILWGDKHERYIHFLKNLSSLTYLDISHNRLLKIPSEAFLSLPPNLTQQFLNNN
RLQVFIFANLTRLKYLKLLDLSQNNFRTVHISFKQSLQSLLLRGNRISEIAVDFSDTNGS
LLFFDLSHNKLKYMNQSTLVQIQGVKYLKLKGNPFACTCQNSDFIKWIQSSTIYIPQLAT
KVNCAIPDKHRKKSVVSAGLHACTLEEDAATLFYISFFVVINIMLIAVTKHFFYWDVWYT
YYICAAKLKGYKSTAKDKALYDAYIAYDTQDATVTDXFHLEENGDKHVLLCLEERDWEPG
KAVIDNLAQSIHRSRKTIFVLTERYVKNGNXFYIALQRPMDENTDVIVFILLEPVLQHSQ
YLRLRRRICKSSVLDWPKNPHAEGLLWQRLKSAVLTDNSMRHDGCTVYRKRLAQGSAAFP
KGCTKSSFIHFNLRFRVPGPAMLQLTSKTPVKFKESVIDLQWYVLYNKVDPAQGEAVFKE
ASRSTELKRRCLS
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggtacagcctcttggcttgtttaaaaacttaacaaaattagagaaattagctcacagt
cacaatcacctgcaagaagtacccaaaggtctctcacctagtataacctcattagagctg
aatgccaacaaaatagtttctattaagaacaacaccttctcagaactcaaaaatttgaag
gaactctacatggatcggaactgttactatagcaatccctgtggaaaaacttttgaaata
gaggatcagacttttgtggccctcaccaatttgactgtgctgtcactttcctacaacaac
ctgacccgagtgcccctcaatttgccctcatctctaagggaactttatcttggctttaac
aagataacaagaatcagccagggtgattttaatgagctggttaatttgcaccttcttgac
ctaagcaggaactgtccaagatgttataatgccccctttccacgtgaaccctgcactata
tactcttccattcaaatacaccaatttgctttccaaaatcttaacaaattaaagactttg
gttttcaccagcacctcacttacaagtgtaccagccatctggtttcagaacatgacacag
ctaaaggtgctantactggcatttaactatttacaaaatgaaatagtttctggcaaattc
ttacggcagtatctaaaccttnnattcttacagtatctaaacctctcacaacatttttct
tctctagtctctttaaaacgattatatcttaaaggttatgttttccaagacctgtgtgaa
aagcacttaaaacttctaattgctctaaaaaagctaaatatccttgatcttgggataaat
tttattaaacgaattgagcttgctgtattccagaattttagtaacctcacagaaatctac
ttaacagataacagaatatcaccttttgtagaggacaataatntgtcttttagaactggt
tggaaaaaaggcattcccaacatattgccatctaactctggaatgagaaggccagccgag
ccattcagtaacacaaaatgttcttcatatggcaaagcattggatctgagctcaaacagc
ctcatcttcattaatccaaatcaatttaaaagttttaatgatatagcctgcttgaatttg
tcttcaaatgatattaaccaagctttcaatggcactgaattcaatctaaccaaactcaaa
tatttagatctatcaaataataaattggatttggcttatggttttgcatttaatgaaatg
aaacttctcaaagtgttagacctgacccataacaagcattattttcgcctggcaggagtc
acacttagactggcatttattgaaagacttcctcagctaaaggttttaaacttaagttgg
aatgctatttccacactgacggacagacagttaagcagcaattcccttcaggaattagtg
tttaaaggaaactgccttgatattttatggggtgacaaacatgaaagatacatacatttt
ttaaagaatctcagtagcctaacataccttgatatatcccacaatagacttttaaaaatc
cctagtgaagcattcctgagcctgccaccgaacctaacacagcaattcctaaacaacaac
agactgcaagtgtttatctttgcaaacctcacaagactgaaatatttgaagctgcttgac
ctgagtcaaaataatttcagaactgttcatatttcattcaaacagtccttgcagtctctg
ctgttgaggggtaacaggatttcagagattgctgtggacttttcagatacaaatggcagc
cttctgttctttgatctgagtcacaacaagctaaaatatatgaaccagtcaacactggtt
caaatacaaggtgtaaaatatttaaagttaaaaggcaacccttttgcctgcacttgccaa
aatagtgacttcataaaatggatacagtcaagtactatttatataccacagctagcaaca
aaagtcaactgtgcaatccctgataagcacagaaaaaagagtgttgtctctgctggtctg
catgcctgtactttggaggaagatgctgcaacattattttatatttcattctttgttgtt
attaacattatgttgatagctgttacaaaacattttttttactgggatgtctggtatact
tactatatttgtgcagcaaaattaaaaggatacaaatctacagccaaagacaaagctctc
tatgatgcttacatcgcctatgatactcaggatgcgacagtaactgacngatttcatcta
gaggaaaacggagacaagcacgttctgctttgtttggaggaaagagactgggagccggga
aaggctgtcattgacaaccttgcacagagcatccatcgcagcagaaagaccatctttgtt
ctaaccgaaagatatgtgaaaaatgggaacnntttttatatcgctctgcagagaccaatg
gatgagaatacggatgtaattgtgttcattctactggagccggtgctacagcattcccag
tacctgaggctgaggaggaggatctgcaagagctctgttcttgactggcctaagaatcca
cacgctgaaggccttctctggcaaagactaaaaagtgcagtgctaactgataacagcatg
cgacatgatgggtgtacagtatatagaaagaggttagcccaggggtcggcagcctttcca
aaggggtgtaccaagtcttcatttattcactttaatttaaggtttcgcgtgccaggccca
gccatgctccagttgactagcaaaactcccgttaagttcaaggagagtgtgatcgacttg
cagtggtatgttttgtacaataaagtggatccagcacaaggtgaagctgtatttaaggag
gcgagtcggagcactgagctgaagagaaggtgcttaagctga
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