Lepidochelys kempii (Atlantic ridley): 140907821
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Entry
140907821 CDS
T11378
Name
(RefSeq) sodium channel protein type 5 subunit alpha-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lkp04040
]
140907821
Ion channels [BR:
lkp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
140907821
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Ortholog
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GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
CcmD_alt
IQ
Motif
Other DBs
NCBI-GeneID:
140907821
NCBI-ProteinID:
XP_073190769
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All DBs
Position
2:complement(256825174..257011368)
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AA seq
1876 aa
AA seq
DB search
MADFSLPCSNHFRQFTRESLAAIEKRIAAYKNFKDHQPKEKPRPQLDLQVFQKLPTLYGN
PPQELVGKPLEDLDPYYNDHKTFMVLNKRKTLFRFTATHALCILSPFHPIRRAVIKILVH
SLFTIFIMCTILINCVFMAIFETPRKSKYTFTAIYTFEVLIKILARGLCLNEFTFLRDPW
NWLDFSVIVMAYAGEFSDLGNVSVLRTFRVLRALKTISILPGLKVIVGTLIQSIKKLADV
MILTVFCLSVFALIGLQLFKGNLRHKCVRDFNSTNGSIYLDDKKWGSFDEFINDSENFFK
KNGTMDILLCGNSSDAGSCPDKYVCLKVGKNPDYGYTSFDTFGWAFLSLFRLMTQDYWER
LYQQTLRASGKIYMLFFMLVIFVGSFYLINLILAVVTMAYEEQNKATIAETEAKERKFQE
AMELLKKEQEALAAKGYDTKSLCSFEMSPLPAEEVKDRSNRRNKNMFLGIEDYGEDRKVS
KSQSSSCQQNSTPVCDEVSKKHLLHHLSVDYFNEPLQRQKATEAVSTITCVLEEVEESQQ
KCPARLKDFALKYLIWDCCPLWLRIKKKVTILVMDPFTDLTITFCIVMNTIFMALEHYKM
RRNLKFMLDVGNKVFTGIFTAEMVLKIIALDPYYYFQHRWNIFDSLIVTISLIDLSLPTK
GKGRKERGNLLVLRSFKLLRVFKLAKSWTTLNTLIKIIGNSVGAVGNLTLVLVIIVFIFA
VVGMQLFGKSYKEHAYKISKDCKPRWHTMDFFHSFLIIFRILCGEWLETMWDCMVVAEQP
LCLIVFLLAMVIGNLVVLNLFIALLLNSFSADNLQAPEDDAEMNNLQIAFARIHKGLRLL
KHSTWDYCCGKLRHPKKVTKKKIKLAAENTCVEIGKEGKKCKENHSNNVTEKNGEQCSVS
ILEDFITNPNMFVCVPIAEAESDSEDYEDDDDNPSTFTEMENSKQQENHQRQRGEQSKRS
GAWCKGSAIFSEDLNEFNIGKQWKAGSSSLLQKEQLDDISCSEGSTVDLTNPEELLKQIP
ELAEYLKKPDNCFPEGCVRHSPCCSMNTTKFPGKTWWNLRKTCYKIVEHNSFESFIIFMI
LLSSGSLAFEDIHLEKRKNIKIMLEFFDKIFTYIFVLEIFLKWVAYGFKKYFTNAWCWLD
FLIVGVSFASLIANSLGYAEIGPMKSLKTLRALRPLRALSQFEGMRVVVNALVGAIPSIM
NVVLVCLIFWLVFSIMGVNLFAGKFGKCINLTEETSGLNESIRNKLDCTTYNDTQKIYWT
NAKVNFDNVGSGYLALLQVATFKGWTDIMYAAVDSRGVEKQPRKEHNLYMYLYFVVFIIF
GSFFTLNLFVGVIIDNFNQQKKKISRQDIFMTKEQRKYYNAMKKLGSKKPQKPIPRPLNK
YQGFFFDIVTSQAFDVIIMILICLNMITMMVETDDQTIRKTDILNKINMFFVAIFAVECT
MKLLALRHYYFTNGWNIFDLSVVIMSIVGALLSDIVNAFENYFSPTLFRVIRLAEIGRIL
RLVRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMANFAYVPWESGIDDMFNF
QTFANSILCLFQMTTSAGWDGLLSPILNTGPPFCDPNIRGAVGECGKPAVGIIFFVSYII
ISFLIVVNMYIAVILENFNVATEESTDPVGDDDFDMFYKIWEKFDPEATQFIEYSALSNF
ADALAEPLRVAKPNKIELLAMDLPLASGDRIHCLDILFAFTKRVLGESGEMDKLKEQTEE
KFMAANPSRFFHEPITTTLRHKEEEVSAIIIQRAYRSHLIQRSMKQASLLYHRTCDGDIL
EDASQKEGLIAFMVNENYGKNLDKSETVSSTSFPPSYDSVTGDTNDNLQVKTADSSKCDV
PIGCRLSPDKDKESIV
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atggctgacttttcactaccgtgttctaaccacttccgccagttcactcgtgaatctttg
gctgctattgagaagcgaattgctgcctacaagaatttcaaagaccaccaacctaaagag
aaacctcgtccccaacttgacttgcaggttttccaaaagctgcctactctctatggcaat
cctcctcaggagcttgttgggaaaccactggaggatcttgatccttattacaatgatcac
aagacatttatggtactgaacaaaaggaaaacactcttccgatttactgccacacatgcc
ttatgtatacttagcccttttcatccgatcagaagagcagtgattaaaattttggtacat
tcattgttcactatttttattatgtgcactattttaatcaattgtgtcttcatggctata
tttgagactcctaggaagtctaagtacactttcacggccatttacacttttgaagtattg
ataaaaatattggcaagaggattgtgtctgaatgaattcaccttccttcgagatccgtgg
aattggttggatttcagtgtcattgttatggcatatgcaggggagtttagtgatctaggc
aatgtttcggtacttcgtacattcagggttctgagagctttaaaaactatttcaatactc
ccaggactgaaggtcattgtaggtacacttatccagtctattaagaaacttgctgatgtg
atgatcctgactgttttctgcttgagtgtctttgccctgataggcctccagctctttaaa
ggcaatttgagacataagtgtgtcagggattttaactccaccaatggaagtatttacttg
gatgacaaaaaatggggctcctttgatgagtttattaatgattcagaaaattttttcaag
aagaatggcaccatggatatcttattgtgtggcaacagctcagatgctggctcctgtcca
gataaatatgtatgtctaaaagttgggaaaaatcctgattatggctacacaagttttgat
acatttggctgggcctttctttccttgttccgcctgatgacacaagattactgggagcgt
ctctatcaacagactctcagagcttctggaaaaatctacatgctcttttttatgctggtc
atctttgtgggttcattttatctgatcaacttgatcctggctgtagtgactatggcatac
gaagagcagaacaaagctactattgctgaaactgaggcaaaggaaaggaagtttcaggaa
gccatggaactgttgaaaaaagagcaagaggcattggctgctaaaggatatgatacaaag
tcactttgctcctttgaaatgtcacctttaccggccgaagaagtcaaagatagaagcaat
aggaggaataaaaatatgttcttagggatagaagattacggggaagatcgaaaagtttcc
aaatcacagtccagtagctgtcaacaaaactcgacccctgtatgtgatgaagtgagcaag
aagcacttactccatcatctgtcagtggactattttaatgagccactacaaagacaaaag
gcaactgaggcagtcagtaccattacctgtgtcctggaggaagtggaagaatcgcaacag
aaatgccctgcccgcttgaaggactttgccctaaaatatcttatttgggactgttgtcca
ctgtggttgagaatcaagaaaaaggtgacaattttagtaatggatccatttactgacctc
accatcactttttgcatcgtgatgaatacgatcttcatggcactagagcactataaaatg
agaagaaatttaaaattcatgcttgacgtaggcaacaaggtctttactggaatttttact
gcagaaatggtcttgaaaatcattgctctagatccctactactattttcagcaccgctgg
aatatttttgacagcttaattgtcactataagcttaatcgacctgagtttacccaccaaa
ggtaaaggaagaaaagaacgaggaaacctgttagttttacgttccttcaaactgctgagg
gtcttcaaactggcaaagtcctggacgactttgaatacacttattaaaatcattggtaac
tcagtgggtgccgtgggtaaccttaccctggttctggtgatcatagtctttatttttgct
gtagtaggaatgcaacttttcggtaaaagctacaaagaacatgcctataaaataagtaag
gattgcaagccacgttggcatacaatggattttttccactcattccttattatattccga
attctgtgtggagaatggcttgaaaccatgtgggattgtatggtggtagctgagcaacca
ttatgccttattgtcttcttgctggccatggtgataggaaacctagtggttctcaatctg
ttcattgcactactgctgaactccttcagtgctgacaaccttcaagcacctgaagatgat
gcagagatgaacaaccttcagattgcatttgctcggatccacaaaggacttcgcttgctg
aaacactcaacatgggattactgttgtggaaagctccggcatccaaagaaagtcaccaaa
aagaaaattaaattagctgctgagaacacatgtgtggagattgggaaagaagggaagaag
tgtaaagaaaatcacagtaacaatgtgactgagaaaaatggagaacaatgctcagttagc
attcttgaagattttatcaccaaccccaacatgtttgtctgcgtcccgattgctgaggca
gaatctgatagtgaggactatgaagatgatgatgataatccaagtacattcacagaaatg
gagaacagtaaacagcaggaaaaccaccagagacagaggggagaacaaagtaaaagatca
ggagcttggtgtaaaggatctgcgattttctctgaagacttaaatgagtttaacataggt
aaacaatggaaggctggatcatcatctctactacaaaaagagcaacttgatgacatcagc
tgttctgaaggcagcacagtggatctgacaaatcctgaggagcttctgaaacagatccct
gagctagctgaatacttaaagaaacctgataactgttttccagaaggctgtgttcgacat
tccccttgctgctcaatgaataccacaaagtttccaggaaaaacatggtggaacctgagg
aaaacatgctacaaaattgttgaacacaactctttcgaaagctttatcatattcatgatt
ctgctaagcagtggaagcctggcatttgaagatatacatcttgagaaaagaaaaaacatt
aaaattatgttggaattttttgataaaatcttcacttacatctttgtcctggagatattt
ctgaaatgggtggcttatggcttcaagaaatatttcaccaatgcttggtgttggcttgac
ttcctaattgtaggtgtctcttttgcaagccttatagctaactcacttggatatgccgaa
ataggacccatgaaatcccttaaaaccctgagagcattgagaccattaagagcattgtca
caatttgaagggatgagggtggttgtgaatgccctagtaggtgccatcccttctatcatg
aatgttgtgcttgtctgcctcattttttggctcgtttttagtatcatgggagtgaaccta
tttgcaggaaaatttggaaaatgcattaacttgactgaagaaacatcaggattaaatgaa
agtattaggaacaaattggattgcacaacctataatgacacgcaaaaaatatattggaca
aatgctaaggtcaactttgataatgttggttctggttatctggctcttcttcaggtggca
acatttaaaggttggacagacattatgtatgcagcagtagattcacgaggggtagaaaag
cagccacggaaggaacataatctatacatgtacctctattttgtggttttcatcatcttt
ggatctttcttcacactgaatctttttgttggtgtcattattgacaattttaaccaacaa
aagaaaaagataagtagacaagacatctttatgacaaaagaacaaagaaaatactataac
gcaatgaaaaaactgggatccaagaaaccccaaaaacccatcccaaggccattgaacaaa
taccaagggtttttttttgacattgtaacaagccaagcctttgatgttatcatcatgatt
ctcatctgccttaacatgatcactatgatggtggaaactgatgatcaaactataaggaag
actgacattcttaacaaaatcaacatgttctttgttgccatctttgctgtagaatgcacc
atgaaattgttggctctgagacactattacttcaccaatggctggaacatatttgattta
agtgtggtcattatgtctattgttggcgctctgctttctgacattgttaatgcatttgaa
aattacttctcacctacactcttcagagtcattcggttggctgagattggacgaatatta
agacttgtccgagctgccaaaggaattagaactctcctttttgccttaatgatgtccctt
cctgctctgttcaacattggtctcctcctttttctggtcatgtttatttatgccattttt
ggcatggctaactttgcttatgttccatgggagagtgggattgatgacatgttcaacttc
caaacctttgctaacagcattctttgtctcttccaaatgacaacatctgctggctgggat
ggtcttctcagtcctattttaaacactggacctccattttgtgatcctaacatacgaggt
gctgtgggagaatgtggtaaacctgctgtgggtattattttctttgtaagttacatcatt
atatcatttctaattgttgtaaacatgtatatagctgttattttagagaacttcaacgtt
gccactgaggaaagtacagatcctgtaggtgacgatgactttgatatgttttataaaatc
tgggagaagtttgatcctgaagcaactcaatttattgagtattctgcactttcaaacttt
gcagatgctttggcagaacctttacgtgtagccaaaccaaacaaaattgagctcctggca
atggaccttcccttggccagcggagataggattcactgtttggatattttgtttgctttt
accaaacgggtgctaggagaatctggggaaatggacaaactaaaagaacagacagaggaa
aagtttatggctgccaatccatctaggttttttcatgaaccaatcacaaccacgctcaga
cacaaagaagaggaggtttctgccattattatccagagggcctataggagtcatttgatt
caacggtccatgaagcaggcctctctcttatatcatagaacttgtgatggtgacatcctt
gaagatgcttcacagaaggaaggtctcattgcattcatggtgaatgaaaattatggtaag
aacctagacaagtctgagactgtgtcttcaacgtctttccctccatcctatgacagtgtc
accggggacactaatgacaacctccaggtaaagacggcggactcttccaaatgtgatgta
cctataggttgtcggctatctccagacaaagataaagaatccattgtttaa
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