Lepidochelys kempii (Atlantic ridley): 140911778
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Entry
140911778 CDS
T11378
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140911778 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lkp04131
]
140911778 (C9orf72)
Membrane trafficking [BR:
lkp04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
140911778 (C9orf72)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
PH_PLEKHM2
Motif
Other DBs
NCBI-GeneID:
140911778
NCBI-ProteinID:
XP_073201669
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All DBs
Position
5:complement(116766767..116792565)
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AA seq
481 aa
AA seq
DB search
MSTLCPPPSPAVAKTEISLNGDSPLLAATFAYWDNILGPRVRHIWAPKTEQMLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLAEKGVIIVSLIFDGNWNGDRSTYGLSIILPQSE
LGFYLPLHRVCVDRLTNIIRKGRIWMHKERQEHFQKIVLESTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEKIDISDTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLIPSERKCSRLCRNESSFKYESGLFVQGLLKDATGSFVLPYRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELAAFWRANSDEEMAQDISIHTDESF
TPDLNVFQDVLHRDTLVKAFLEQVFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRSLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactctctgtccacctccttctcctgcagttgccaagacagagatctcattgaat
ggggactcaccattactagctgctacttttgcctactgggacaatattcttggacctaga
gtcagacacatctgggccccaaagacagaacagatgcttctcagtgatggagaaataact
tttcttgcaaatcacacattgaatggggaaattcttaggaatgcagagagtggagcaata
gatgtgaagttttttgtcttggcagaaaaaggagtaattattgtgtcattaatctttgat
ggaaactggaatggggacagaagtacttatggactatcaattatacttccacaaagtgaa
cttggcttctatcttcctcttcacagagtgtgtgttgataggttaacgaatattataagg
aaaggaagaatatggatgcataaggagaggcaagaacatttccagaagattgtcttggaa
agcacggagagaatggaggatcagggccaaagcatcattccaatgctgacaggagaagtt
attcctgtaatggaacttctttcatctatgaaatcccacagtgttccagaaaaaatagat
ataagtgacacagtgttaaatgatgatgacattggggacagttgccatgaaggttttctc
ctcaatgccatcagttcacacctacagacttgtggttgctctgtggttgtaggtagcagt
gcagagaaagttaataagatagtgaggacattgtgtctgtttcttattccatcagaacgg
aagtgttccagactctgtagaaatgaatcttccttcaaatatgaatcaggactctttgta
caaggattgctcaaggatgcaactggaagctttgtgttgccctaccgtcaagtaatgtat
gctccatatcctactacacatatagatgtggatgtcaacacagtgaagcagatgcctcct
tgccatgaacatatctataaccaacggcgatacatgaggtccgagctggcagcattttgg
agagccaattcagatgaagagatggctcaggatatctctatccacacagatgaaagcttc
actcctgatttgaatgtttttcaagatgtcctgcatcgtgatacgttagtaaaagccttc
ctggagcaggtctttcatttgaaacctggcttgtctctgaggagtactttccttgcccag
tttctgctagtccttcatagaaaagccttaactctcattaagtacatagaggatgatacg
cagaaaggaaaaaagccttttaagtctctccgtagcttaaaaatagaccttgacttaaca
gcagagggcgatcttaacataataatggctttagctgagaagatcaaacctggtctacat
tcctttatctttgggagacccttctacactagtgtacaagaacgtgatgtactaatgaca
ttttaa
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