Lepidochelys kempii (Atlantic ridley): 140913390
Help
Entry
140913390 CDS
T11378
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04620
Toll-like receptor signaling pathway
lkp04621
NOD-like receptor signaling pathway
lkp04622
RIG-I-like receptor signaling pathway
lkp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
140913390 (TRAF3)
04621 NOD-like receptor signaling pathway
140913390 (TRAF3)
04622 RIG-I-like receptor signaling pathway
140913390 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
140913390 (TRAF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF3_RING
zf-TRAF
CCDC18_1st
zf-C3HC4
ATG16
Cast
zf-C3HC4_2
MPS2
Sina_ZnF
CEP104_ZnF
CCDC18_2nd
ODF2_N
zf-RING_6
Tropomyosin
zf-C3HC4_4
Rod_CreS
Spc29
zf-RING_UBOX
ADIP
KxDL
SNARE
Motif
Other DBs
NCBI-GeneID:
140913390
NCBI-ProteinID:
XP_073205808
LinkDB
All DBs
Position
6:112816937..112907532
Genome browser
AA seq
578 aa
AA seq
DB search
MKCYVREITYYNMDMSKKTEPPVSVEMVQQRANPDHAPGSIYVPEQGGYKEKFVNTVEDK
YKCEKCHLILCNPKQTECGHRFCETCINALLSSSSPKCTACQENIVKDKVFKDNCCRREL
LALQIYCRNENKGCNELLTLAQLLTHLRNDCQFEELSCHRADCKEKILRKDLPDHVEKTC
KYRETTCKYCKSQVPMITLQKHEDTDCPSVAVSCPHKCSVTSLLRRELNAHLSECINAPS
TCSFKRYGCTFQGTNQQIKAHEASSAVQHVNLLKEWSNSLENKVAMLQNESLEKNKSIQT
LHNQICSFEIEIERQKEMLRNNESKILHLQRVIDNQAEKLKELDKEIRPFRQNWEEADIM
KSSVESLQNRVSELESVDKTAGQGARNTAVLETQLSRHDQMLSVHDIRLADMDLRFQVLE
TASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTH
LSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNI
ASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgctatgtaagagaaattacctattacaatatggacatgagtaaaaagacagaa
ccccctgtgtctgtagaaatggtacaacaaagggcgaaccctgatcacgctcctggatca
atttacgttccagaacaaggtggttacaaagagaaattcgtaaatacagtggaggacaag
tataaatgtgaaaagtgtcatctcatattgtgcaatcctaaacagacggaatgtggacac
agattctgtgaaacctgcattaatgcattgttaagttcttctagtccaaaatgtacagcg
tgtcaagagaacatagttaaagataaggtatttaaggataactgctgtaggagagagctt
cttgcccttcagatatattgcagaaatgaaaacaaaggctgcaatgaactactaacgctg
gcacaactactgacgcatttgagaaatgactgtcagtttgaagaactttcatgccaccgt
gctgattgcaaggagaaaatactgcggaaggacttgccagaccatgtagaaaagacctgt
aaatatcgggagactacatgtaaatactgtaaaagccaagtcccaatgattacattacag
aaacatgaagatacagactgtccctctgtcgcggtttcatgtcctcataaatgcagtgtt
acatcactcttgagaagggagttgaatgcacatttgtcagaatgtattaatgccccaagt
acctgtagttttaagcgttatggctgcacttttcagggaacaaatcagcaaattaaagca
catgaagccagctcagcagtgcagcatgtaaatttattgaaagaatggagtaattctcta
gaaaataaggtggccatgctccagaatgaaagtttggaaaagaacaagagtatacaaact
ttacataatcagatttgtagctttgaaatagaaattgaaagacagaaggaaatgctgcgg
aataatgaatctaaaatacttcatttacagcgagtgatagacaatcaagcagagaaattg
aaagaactggataaagagatccgccccttccgacagaattgggaggaggcggacatcatg
aagagcagtgtggagtccctccagaatagagtgagtgaactggaaagcgttgataaaact
gcaggacaaggagctcgaaatacagccgtactagagacgcagctaagtagacacgatcaa
atgctgagtgttcatgatattcggttggctgacatggacctccgattccaagtgttagaa
acggccagttacaatggagtattaatttggaaaattcgagattataaacgtcggaaacaa
gaggctgtcatggggaagactctgtccttatacagccagcctttttatactggatacttt
ggctataagatgtgtgccagagtttaccttaatggagatggcatgggaaaagggacgcac
ttgtcattgtttttcgtcataatgcgtggagaatatgatgccttacttccttggccattt
aaacagaaagtgactctgatgctaatggatcagggaccttctcgacgtcacttaggagat
gctttcaagccagacccaaacagcagtagtttcaagaagcctactggagaaatgaacatt
gcatctggctgcccagtctttgtggctcaaacagttctagaaaatggaacgtatattaaa
gatgatactatttttattaaagtcatagtggatacttcggatctaccagacccctga
DBGET
integrated database retrieval system
