Lepidochelys kempii (Atlantic ridley): 140917174
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Entry
140917174 CDS
T11378
Name
(RefSeq) cystathionine beta-synthase-like isoform X1
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp00260
Glycine, serine and threonine metabolism
lkp00270
Cysteine and methionine metabolism
lkp00670
One carbon pool by folate
lkp01100
Metabolic pathways
lkp01230
Biosynthesis of amino acids
Module
lkp_M00035
Methionine degradation
lkp_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
140917174
00270 Cysteine and methionine metabolism
140917174
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
140917174
Enzymes [BR:
lkp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
140917174
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Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
CBS
Methyltransf_12
Motif
Other DBs
NCBI-GeneID:
140917174
NCBI-ProteinID:
XP_073215503
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Position
1:156526759..156580823
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AA seq
632 aa
AA seq
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MRRTAGVSSLLPDLRVLCAGRVSSLPLSGCISLCCSRWMGLPEVRLPRWQSWRWRMGLAF
SSPPSLLRLIWRFPERERRDTMPSVPPEAEMDTSSCSHFSAKCLLNGGLEKEPCNISEER
EWIRPDTPSKCTWELGKPPSESPHYHPTLPKSPNILPNILRKIGDTPMVQINRIGKFFGL
KCELLAKCEYFNAGGSVKDRISLRMVEDAERAGILQPGDTIIEPTSGNTGIGLALAAAVK
GYRCIIVMPEKMSMEKVDVLRALGAEIVRTPTTARFDSPESHVGVAWRLKNEIPNSHILD
QYRNASNPLAHYDTTAEEILQQCEGKIDMLVVGAGTGGTITGVARKLKEKCPDCQIIGVD
PLGSILAEPEELNKTDKTTYEVEGIGYDFVPTVLDRSVVDKWYKSNDEESFALARMLIRE
EGLLCGGSSGSAMSIAVKAAKDLTEGQRCVVILPDSVRNYMSKFLNDKWMTQKGFMKEED
DIINKPWWWHLKVQELSLSAPLTVLPGVTCEKTIEILREKGFDQAPVVDECGVILGMVTL
GNMLSSLLAGKVQPSDHVGKVIYKQFRQIHLKDSLGKLSHILEIDHFALVVHEQIQYLSD
GSSSKRQMVFGVVTAIDLLNFVTARERERRAT
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcactgccggggtttcgtcgttgttgcccgatctgcgtgttctttgtgcgggg
cgtgtctcttccctgccgctttccggttgcatcagcttgtgctgcagccggtggatgggg
ttgccagaggtcaggttacccaggtggcagtcgtggcgctggcgaatgggtttagctttc
tcctctcccccctcccttcttcgtctgatttggagatttcccgaaagggagcgaagagac
acaatgccttcagttcctccagaagcagaaatggacaccagttcctgctctcacttctct
gctaaatgcctgctgaacggagggctggagaaggagccctgtaacatcagtgaggagaga
gagtggatccgacctgacacccctagcaaatgtacctgggagctggggaaacccccctct
gaatcccctcattatcaccccactttgccaaagtcgccaaacatcctaccaaacattctg
aggaaaattggtgatactcctatggtacaaatcaacaggatcggaaagttctttggactc
aagtgtgaactcttggcaaagtgcgagtactttaatgctggggggagcgtgaaggatcga
atcagcctgaggatggtggaggatgcggaaagagctgggattttgcaacctggggacacg
atcattgagccaacatcaggaaacacaggaattgggctggccctggctgctgcagtgaaa
ggctaccgctgcatcattgtgatgccagagaaaatgagcatggagaaggtggatgttctg
agagctcttggtgctgagattgtgaggaccccaactactgccaggtttgactcacctgaa
tctcatgtgggagtagcatggcgactgaaaaatgaaatccccaattcccatatcctagac
cagtaccgcaatgccagtaaccccttggcacactatgacactacagctgaggagatcctg
cagcagtgtgaaggaaaaatagacatgctggtggttggagctggcacaggaggcaccatc
actggcgttgcaagaaagctgaaagagaaatgcccagattgccaaattattggcgtcgat
cccctgggctccattcttgctgagcctgaagaactgaataagactgacaagacgacatac
gaggtggaggggattggatatgattttgtccctaccgtgctggacagatcggtggtggac
aagtggtacaagagcaacgatgaggagtcttttgctttggcacgcatgttaatcagagag
gaaggattattgtgtggtggcagctccggcagcgcaatgtccattgctgtgaaggctgcc
aaggatttaacggagggtcagcgctgtgttgtcatcttgcccgactccgtcaggaactac
atgtccaagtttttgaatgacaaatggatgacccagaaagggttcatgaaagaagaagat
gacattattaacaaaccttggtggtggcacctcaaagttcaggaattaagtctctctgcc
cccctgacagtgcttccgggcgtcacctgtgaaaagaccattgaaatcctccgagagaag
ggatttgaccaggcaccagttgttgatgaatgtggtgtgattttgggaatggttaccctt
gggaacatgctttcttcgttacttgctgggaaagttcagccatcagatcatgtcggcaaa
gtaatctacaagcaattcagacagattcatctgaaagacagcttggggaaactttctcat
atcctggaaatagaccactttgctctagttgtacatgaacagattcagtatctcagtgac
ggctcctccagtaagagacagatggtgtttggcgttgttacagccattgacttgcttaac
tttgtgactgcacgggagcgggaaagaagggccacctaa
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