Lutzomyia longipalpis: 129788849
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Entry
129788849 CDS
T10428
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
lll Lutzomyia longipalpis
Pathway
lll03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
129788849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lll03400
]
129788849
Enzymes [BR:
lll01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
129788849
DNA repair and recombination proteins [BR:
lll03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
129788849
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
BRCT
RNA_ligase
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
129788849
NCBI-ProteinID:
XP_055681211
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All DBs
Position
2:6325335..6328842
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AA seq
914 aa
AA seq
DB search
MSDSMEELCISKSIKFSSVTALLEKIRDKKSIVIKEKLIRKFLQEFQEFLGNPQNTEKKQ
KTSFYPVLRLLLPDCDHERGSYGIKEATLGRLYVRGLGIDGKSTEAKALLGGHSNARDYG
ELVFQVMQARSKQTSEISVFEVNKRLDLIAEHFQNGHSKKIDDVFVSFISEMTACDQKWL
TRIILKHLALGIGKDKIFKILHPQALAKYNMTNKLSDACNMMECEEKDEIVPQSSGKDLS
TMITLFSPIKPMLLARISLSALSETLKQKEYFIETKMDGERFHLHRSDGQYRYFSRNGHD
YSEKFGRDFASGSLTPYIHGLFAKDIKIILDGEMMVWNRQDEFFYAKGDNYDVKNIHAND
PLLKPVFTVYDILWLNGESLLDKPYAERRRLLRTLVREKPGALVLGTNEKIEDFDHLIKC
FNDAVDRAEEGIVIKEVGSHYRPGVRAIQAGWFKLKPDYVEGAVTDLDLLIIGGYRDRKG
YIESYLLGVYTNGPGERSDPIFHSVGKVSAKGLKFDERRKLHADLEAHWKSVEKEKNGRR
GKVEAPQCLEWKNAVPDVWIEPSKSIVLEIKATELTKTDTYRTTHALKFPRIMAVRGDKP
WYDSFTLAEFEQLCGKSGGRTGVEKLAKRHITRDDAKKKVPVKRQKITDLGNLRKLPEHI
KQVSKIFENLSFCVLSTRKNMPSIDEIREMILKHSGQIVENPGPSTYAIIAGDITLSVRK
YAEKKLYNIAKVDWLVRSLEGTGIPKKLPKFHPKDMISCTPELEDCFTKSFDEYGDSFKD
PVTCESLKNLLDDMTIDRSERLLRRELINIEKEIYGDSGDGRNIFRPFAIHFFDTNQCHE
TKLAEIIFKSRQGNVIDDFISSNNSCIAINPLRLPQFRDQFANLISENHQLISTQWIHAC
HSQGKILQMTDYLI
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatagtatggaggaactctgcatatccaagagcatcaaattttcaagtgtaaca
gcactgttagaaaagattcgtgataaaaaatcaattgtaataaaggaaaaattgatccgg
aagtttcttcaggaatttcaagaatttctcgggaatcctcaaaatactgagaagaagcaa
aagacaagcttctaccctgttcttcgacttcttctccctgattgtgatcatgagcgggga
tcctatggcattaaggaagccacacttggacgtctctatgtacgaggattggggattgac
gggaagagcacggaagccaaagcactccttggaggacattcaaatgccagagattacgga
gagttggtattccaagtgatgcaagcgcgatcaaagcaaacgtcggaaattagtgttttt
gaggtgaacaagaggctggatttgattgcagagcacttccagaatggacattccaagaaa
atcgacgatgttttcgtaagtttcatctccgaaatgactgcttgtgaccagaaatggctc
acacggataatcctgaagcatctggccctgggtattgggaaggataaaattttcaaaatc
ctccatcctcaagcactggcaaagtacaatatgacaaataaattatcagatgcgtgcaat
atgatggaatgtgaggagaaagatgaaattgttccacagtcttccggaaaggacttaagc
acaatgattacactattcagtcccataaaacccatgctcctggctcgtatatctctcagt
gccctaagtgagaccctcaaacagaaggaatattttatcgagaccaaaatggatggggag
agatttcatttgcaccgttcagatgggcagtacagatacttttcaagaaatggtcatgat
tacagtgagaaattcggcagagactttgcatcaggaagtctcacgccttacattcacggt
ctctttgcaaaggacattaaaataattttagacggggaaatgatggtttggaacagacag
gatgaatttttctatgcaaaaggagacaattatgatgtgaaaaacatccatgcaaatgat
ccccttctcaagccagtttttaccgtttatgacattctctggctcaatggggagagtctc
ctcgataagccctatgccgagaggaggcgtctcctgcggacgctggtccgggaaaaacca
ggagctctcgttttgggaactaatgaaaaaatcgaggattttgatcatctaattaagtgt
ttcaatgatgcagtggacagagcagaagaaggtattgttatcaaggaagtaggatcacac
tatcgaccaggcgtgagggctattcaggctggatggtttaagcttaaaccagattatgtg
gaaggtgcggtgactgacctggatttgttaattattggcggttatagagataggaagggg
tacattgaatcgtatctcctgggtgtttacacaaacggacccggtgagaggtcagatcca
atatttcactctgtgggaaaggtcagtgctaaaggcttaaagtttgatgagagacgtaaa
ttacatgcagacctcgaggcacactggaagtccgtggagaaggagaaaaacgggcgaagg
ggcaaagttgaggcaccacaatgtctcgagtggaaaaatgctgtgcccgatgtgtggatc
gagccatccaagtcgattgtgttggagataaaggcgacagaattgacgaaaacagacact
tatcgtaccacccatgctctcaaatttccccgaattatggctgttcgtggtgataaaccg
tggtatgattccttcacattggcggaatttgagcaattgtgtggaaagagtggtggtaga
acaggtgtggagaagctcgcaaagcgccacataacgcgagatgatgcaaagaagaaggtg
ccagtgaagcgtcagaaaatcacagatttggggaatttacggaagctccctgagcacatc
aagcaagtgtcgaaaatctttgaaaatttgagcttttgcgtactcagcacccggaagaat
atgccatcaattgatgaaattcgtgagatgattttgaagcacagtgggcaaattgtggag
aaccccggtccatcaacgtatgccattatagcgggagatataacactaagtgtgcgcaaa
tatgctgagaagaaattatacaatattgccaaagttgattggctcgtgagatcattggag
ggcaccggaatcccaaagaaattacccaaatttcatccaaaagatatgatttcatgtaca
ccagagttggaggattgttttacgaaatccttcgatgagtacggagactcctttaaggat
cccgtaacatgtgagagcttaaagaatttattggacgacatgacaatcgatagaagcgaa
cgtttgctgcgaagggaactaataaacattgagaaggagatttatggggatagtggtgat
gggagaaatatctttcgaccctttgccattcatttcttcgacaccaatcaatgccatgaa
accaaattggctgaaatcatctttaagtcacgccaaggaaatgtgattgatgattttatt
tcctccaacaactcttgtatcgccataaatccactcagattgcctcaattcagggatcaa
ttcgcaaatttaataagcgaaaaccaccaactcatctcaactcagtggattcatgcgtgt
cattcccaaggaaaaattctccagatgaccgactacctcatttag
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