Lineus longissimus (bootlace worm): 135492776
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Entry
135492776 CDS
T09977
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon04120
Ubiquitin mediated proteolysis
llon04140
Autophagy - animal
llon04144
Endocytosis
llon04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135492776
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135492776
04140 Autophagy - animal
135492776
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
135492776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llon04131
]
135492776
04121 Ubiquitin system [BR:
llon04121
]
135492776
Enzymes [BR:
llon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135492776
Membrane trafficking [BR:
llon04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
135492776
Ubiquitin system [BR:
llon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
135492776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_2
TRAF3_RING
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-TRAF_2
zf-rbx1
Sina_ZnF
zf-RING_5
RING_XB3-XBAT31
U-box
Zn_ribbon_NrdR
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
135492776
NCBI-ProteinID:
XP_064635487
LinkDB
All DBs
Position
8:1240668..1252232
Genome browser
AA seq
579 aa
AA seq
DB search
MESKKCACQASESSSDEEVVDSIVVAHTPGVSISPTHPRDALSLEGFNNDFVPPLDTKHQ
CQICMLALREPYQTQCGHRFCHSCILRWIRQRPTCPMDNKTLTEDMLYPDNFAKREIFLL
KVRCKNKSRGCSSVMELNYYEDHQPVCPYGLIPCPLGCGMDVKVKDVEKHEKYMCVLRRY
ECNECGDQLTYQKVGEHQNTCPKSKIPCRFCQVIMTRDKLDHHQRKECPEVLTKCTFASY
GCDIVEKRKSLDNHIEKSTNKHLELLNQFILNHGLFWESGTHGLDDFTPRCHENSLSRNA
AQRRPASLDFTQGRRGDSTQDVSRQESDVYAGSDPGPMASGSSDYGSCSYREGFNSHGAI
LDKCGSISYPPAGHEAQAKIKSLQQQVVEQGQVIVELQGKVLQQQNLKDELVRMQSKLEQ
VEERVCNGQYIWRIDQYSKLIEDATKGKMTVIHSKGFYTSIYGYKVCLRINLNNKGTYLS
IFVHLMQGDYDDFLDWPFSGKISLRVLDQNTLIRERKPVTETFVAGPQLAAFQRPTSARN
HKGFGYMEFIPLGVIRDGTYIKDDTLVIKAEISEHRPTE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgaagaagtgcgcgtgccaggcgtctgaatcaagttcagatgaggaggtcgtg
gattcgattgtagttgcccatacgcctggagtctctatatcacctacacaccctagagat
gcgttgtctttggaaggatttaataatgattttgttccacctttggacacgaaacaccag
tgccagatctgtatgcttgcccttcgagaaccttatcagactcaatgtggtcaccgattt
tgtcacagctgtatcttacgatggattcggcaacgtccaacctgccctatggacaataaa
actttaaccgaggatatgttatatccagataacttcgccaagagagaaatatttttatta
aaagtgagatgtaagaacaagagtagaggttgtagcagcgtaatggagttaaattattat
gaggatcaccaacctgtttgtccttatggtctaatcccgtgtccgcttggttgtggtatg
gatgttaaagtaaaggatgtcgaaaagcatgaaaaatacatgtgcgttttacgccgatat
gaatgtaacgaatgcggtgatcagcttacgtaccagaaagttggggaacaccagaatacg
tgtccgaaatctaaaattccctgcaggttttgccaggtcataatgacaagagataagctt
gatcatcaccaacgaaaggaatgtcccgaggtcttaacaaagtgtacatttgcttcttat
ggatgtgatatcgtggaaaagagaaagtctttagacaatcatatcgaaaagtcaacgaat
aagcacttggaattacttaaccaattcatcctaaaccacgggctattttgggaatcaggc
acccatggcttggatgatttcacaccacgatgccatgaaaactccctgtcaaggaacgct
gcgcaaagaaggccagcatctttggactttacacagggtagaagaggggattcaactcaa
gatgtttccaggcaggaatcggatgtttatgcagggtcagatcctggcccgatggcgagt
ggttccagtgactacggttcatgtagttatagagaaggttttaacagtcatggtgctatc
ttggacaagtgtggctctatctcttatccgccagctggacacgaagctcaagccaaaata
aaatctctacaacagcaggttgttgaacaaggacaagtcattgttgaactgcagggtaaa
gtcttgcagcagcaaaacttaaaagatgagttagtgcgcatgcagtccaagcttgagcag
gttgaagaacgggtatgcaatggacagtacatttggcgaatcgaccaatattctaagctc
attgaagatgccacgaagggaaaaatgaccgtgatacatagcaaaggattctatactagc
atctacgggtataaagtgtgtctacgaattaacctgaacaataagggaacatacttatcc
atatttgtacacctaatgcaaggggattacgatgatttcttagactggccattttcgggg
aagatttccttgcgagtgttagatcagaacacgttgatccgagagagaaaacctgtgaca
gaaacatttgttgctggtccgcaattggcagcatttcaaaggccaacctccgccaggaac
cataagggatttggctacatggaatttataccactcggtgtgatacgtgatgggacttat
ataaaagacgatacgttagtcataaaggccgaaatatcagaacataggccgactgaatag
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