Lineus longissimus (bootlace worm): 135496579
Help
Entry
135496579 CDS
T09977
Name
(RefSeq) tRNA pseudouridine(38/39) synthase-like
KO
K01855
tRNA pseudouridine38/39 synthase [EC:
5.4.99.45
]
Organism
llon
Lineus longissimus (bootlace worm)
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
llon03016
]
135496579
Enzymes [BR:
llon01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.45 tRNA pseudouridine38/39 synthase
135496579
Transfer RNA biogenesis [BR:
llon03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
135496579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
135496579
NCBI-ProteinID:
XP_064642012
LinkDB
All DBs
Position
12:9247020..9272340
Genome browser
AA seq
473 aa
AA seq
DB search
MNSKRDDYSNLSRENLIEKVQTLERHVKQLQNVLSRGKSEERAKKRKEARPFDFTKYNTR
HVALKFLYLGWDYQGFAVQEDTEKTIEHELFDALNKTKLIESRETSNYHRCGRTDKGVSA
FSQVISLDLRTNLLSGVGVKAREGGMAPERPGDKSKEINYIHILNKVLPKEIRIVAWAPV
NPEFSARFSCTKRQYKYIFPRGDMNIEAMHIAAQKLVGEHDFRNFCKMDISNGVVMYTRR
ILAVSIDYITDGHDGYQLCELTIEGNAFLWHQIRCIVTILFLVGQGKEMPQIIDELFDIT
VHPRKPQYTMASELPLILFDCEYEDIKWIYDQENMKSTLVNMQRLWTAETTKATITKRML
DKLESTQVATADDGTSCVAVQSQAECIIPGNKTRIYKPLLERQTCDSLEERLDALAKRRK
IQSSFPIEEKEEKVESPKTAGNVTLLKKDDDAFMLTAPGNSLISVSVDSLEDS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgaaaagagatgactattccaatttgtcaagagagaatttgatagaaaaagtc
cagacccttgagcgacatgttaaacagctgcagaatgttttatcacggggcaagagtgaa
gagagggcaaagaagaggaaggaagcaagaccattcgatttcacaaagtacaacacgagg
catgtagcactcaagttcctctatcttggttgggattaccagggctttgcagtccaagaa
gacacagagaaaaccatagaacatgagttgtttgatgcacttaacaagactaaattgatt
gaatcaagggagacgtctaattaccataggtgtggcaggacagataaaggtgtcagtgcc
ttctctcaggtgatttcgttagatctgcgaacaaaccttctttctggtgtcggtgtcaag
gcaagggagggtggcatggcccctgaacggcctggagacaagtccaaggaaattaactac
attcatatcttgaataaagtgctgccaaaagagataagaatcgtagcttgggcacctgtg
aatcctgaatttagtgcaagattcagctgcacgaagaggcaatacaaatacatttttccc
aggggggatatgaatattgaagcaatgcatattgctgcacaaaaacttgttggagaacat
gatttccgcaacttctgcaaaatggacatcagtaatggcgtggtgatgtatacacggcgg
atactagcagtgtcgattgactatataacggacgggcacgatggatatcagttatgtgaa
ctaacaatagaaggaaatgctttcctgtggcaccaaatacgttgtattgtgaccattctg
ttcctcgttggacaaggaaaggaaatgccacaaattattgatgagttatttgatatcact
gttcatccaagaaaaccccagtataccatggcttcagagctgccattgattctctttgac
tgtgagtatgaagatatcaagtggatatatgatcaagagaatatgaagtcaactcttgtc
aacatgcagagattatggactgcagaaacaaccaaggctactatcaccaagagaatgttg
gacaaattggagtctactcaagtagcaaccgcagatgatggcacatcttgtgtagccgta
cagagccaggctgaatgtattattcctggaaacaaaactcgcatttataagccgttactt
gaaagacaaacttgtgatagtcttgaggagcggctagatgccttagcaaagaggaggaaa
atccaatcgtcatttccaattgaggagaaggaggagaaagttgaatcccctaaaactgct
ggtaatgtgacattactcaaaaaggatgatgatgcattcatgttgactgctccggggaac
agtttgatatcagtttctgttgattctttggaggattcatag
DBGET
integrated database retrieval system
