Lineus longissimus (bootlace worm): 135496653
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Entry
135496653 CDS
T09977
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon04120
Ubiquitin mediated proteolysis
llon04140
Autophagy - animal
llon04144
Endocytosis
llon04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135496653
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135496653
04140 Autophagy - animal
135496653
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
135496653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llon04131
]
135496653
04121 Ubiquitin system [BR:
llon04121
]
135496653
Enzymes [BR:
llon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135496653
Membrane trafficking [BR:
llon04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
135496653
Ubiquitin system [BR:
llon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
135496653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-TRAF
TRAF-mep_MATH
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
MATH_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
TRAF3_RING
RING_XB3-XBAT31
SlyX
zf-RING_10
zf-Nse
Ribosomal_L37ae
Fez1
Motif
Other DBs
NCBI-GeneID:
135496653
NCBI-ProteinID:
XP_064642157
LinkDB
All DBs
Position
1:19345530..19347033
Genome browser
AA seq
437 aa
AA seq
DB search
MASANAPRDHSMPASNTEPEIDKKYICPVCLSVLKEPVQTKCGHRFCRHCFKTSAGDRFR
TKCPVDNTWLSTNKDVFEDAAFKRELLSVNVACPHKNDGCTWSDEYRGLSSHIRSCEYVT
ETCPLGCERSCSRLTMQQHVQACPNRLEACKLCDDDIKVGDSLKHMILACPKFPVTCSYC
SRPDVVRELLGDHVDPVLGDCPNVNVHCQYYTKGCEFSDCRKDMQKHYDENINQHLRLVC
DKLSDTESKLYYQDGEIDILKQRLTEVQADCATQRDQIRTLEAAASPTAENGGNLFWRIS
LPEGDAFRSQSFNVGANNSGYKFALAINLSDLESDQSGTFSTIAVILQKGEHDDQLPFPF
TGLCTVTVLDLSDDEQVPYVKNFILELPRAHSENFVECLQNNARKYKLIKLDHLLENYSH
DSSVVLRVDIQPMTDGL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgctaatgctccaagggaccattcaatgccagcttcgaacactgagcctgaa
atcgacaagaaatacatctgccctgtctgtctgtctgtactgaaggagcctgtccaaacg
aaatgcggccaccgattttgtcgccattgcttcaagacgtctgcaggagatcgttttcgc
acgaagtgtcccgtggataatacgtggctatcgactaataaggatgtctttgaagatgct
gcttttaaacgtgaacttttgtctgtcaatgtggcctgccctcacaagaatgatgggtgt
acctggagtgatgaataccgtggactatccagccatatccgctcatgtgaatacgttacg
gagacttgcccgttaggatgtgagcgatcgtgctcgagattgacaatgcaacaacacgta
caagcttgcccgaatcgtctggaagcttgtaaactctgtgacgacgacatcaaagttggc
gattcgctcaaacacatgattcttgcctgcccgaaatttcccgtgacttgcagttattgc
agccggccagatgttgtcagagaacttttaggggatcatgttgatcccgttcttggagac
tgccccaatgtcaatgttcactgccagtattacacgaagggttgcgagttttcagattgc
cgtaaggacatgcagaaacattacgacgagaacataaaccagcacttgcgtcttgtgtgt
gataagttatccgacacagaaagcaagctctactatcaggacggcgagatcgacatcttg
aaacaacgactaacggaagttcaggcagactgtgcgacacaacgggaccagattcgtaca
ttagaagctgcggcgtcacctactgcagaaaacgggggaaacttattctggcggatatca
ctaccagagggcgatgcattccgcagccagtcgtttaacgtcggagcaaataacagcggc
tacaagtttgccttggcgattaacctgagcgatcttgagagcgaccagtccggaactttc
tcgacaatcgccgtgattttacagaagggcgaacatgatgatcagctgccgttcccgttt
accggactctgtaccgttactgtccttgacctcagcgatgacgagcaagtgccctacgtg
aagaacttcatcctggaactcccacgtgctcactctgagaactttgtcgaatgtctgcag
aataatgctagaaagtacaaactgatcaagttggatcatctgctagagaactattcgcat
gacagtagtgttgtattgagagtggatattcagcccatgaccgatggcttgtag
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