Lineus longissimus (bootlace worm): 135500576
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Entry
135500576 CDS
T09977
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135500576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llon03041
]
135500576
Spliceosome [BR:
llon03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
135500576
Complex C
U5 SnRNP specific factors
135500576
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
Septin
MMR_HSR1
Roc
Motif
Other DBs
NCBI-GeneID:
135500576
NCBI-ProteinID:
XP_064648186
LinkDB
All DBs
Position
16:6286210..6294992
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AA seq
977 aa
AA seq
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MDADLYDEFGNYIGPELDTDEEAEEDSDNDLEDEREYAGMDDEDMDEDRDNMDDGAEQMQ
VVLHEDKKYYPTSEEVYGPDVEIIVHEEDTQPLTQPIIAPVKKTKFALPEQDLPETTYDM
EFLADLMDSPELIRNVTLCGHLHHGKTTFIDCLMEQTHPEIRPQEDKDLRYTDTLFTEQE
RGVSIKASPVTVVIPDTKSKSFLMNVYDTPGHVNFSDEVTAAFRLSDGIVLFIDAAEGVM
LNTERLIKHAVLEKLAITICINKVDRLILELKLPPTDAYYKLRHIVDEVNGLIAMYSESE
EQTVMSPVLGNVCFASSYYRFCFTLRSFSAIYADSYEELNADEFARRLWGDLYFHTKSRR
FLKKAPSSTASRSFVEFILEPLYKIFAQIVGDVDEGLPQTCDELGIGLTKEERNMNIRPL
LQIVLRKFFGDFTGFVDMCVQHVPSPYANAQNKIEHIYTGPVDTELADAMTSCDPDGPLM
VHTTKMYPTADLTVFHVFGRVMSGILYANQDVKILGENYSLQDEEDSRFGQVGRLWIFES
RYRVEVNRVPAGNWVLIEGVDTPIVKTATITESTGNEEAHIFRPLKFNTSSVMKIAVEPV
NPSELPKMLDGLRKVNKSYPLLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIEIKV
ADPVVSFCETVVDTSSLKCFAETPNKRNKVTMIAEPLEKGLAEDIENEVVQITWPRKRLG
EFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKNLLGSVKDSIVQGFQWGTR
EGPLCDEPIRNVKFKILDAVIAQEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYYFVE
VQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFLPAIDSFGFETDLRTHTQGQA
FCLSVFHHWQIVPGDPLDKSIIIRPLEQQPATHLAREFMIKTRRRKGLSEDVSINKFFDD
PMLLELAKQDVMLNYPM
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgacctctatgatgagtttgggaactatattggtccagaactggacacggat
gaggaggctgaggaagattctgacaatgatcttgaagatgagagggaatacgctggcatg
gatgatgaggacatggatgaagaccgagacaacatggacgacggggcagaacagatgcag
gttgtcctccacgaagataaaaaatactacccgacatcagaggaggtgtacggtccagat
gtcgagatcatcgtccatgaggaggacactcagccgctgacacagccgatcattgctcct
gtgaaaaagacgaagtttgctctcccagagcaggacctaccagagaccacgtatgacatg
gagtttcttgctgacttgatggacagtcctgagctgataagaaacgtgacactctgcggt
catctgcatcacgggaagacgacgttcatcgactgcctgatggagcagacgcatcctgag
ataagaccacaggaagataaagatctcagatacacagacacgctctttactgaacaggag
cgtggtgtgagcatcaaggcaagccctgtcaccgtggtcattcccgacaccaagagcaag
tcgttcctgatgaatgtctacgacacgcccgggcatgtcaatttctctgatgaggtcaca
gccgcttttagattgagcgacggaattgtacttttcatagacgcagctgaaggggtgatg
ttgaacacagagcgcctcatcaaacatgcagtcctggagaaacttgccatcacgatctgc
atcaacaaggtcgaccgcctcatcttggagctcaaactcccgccaaccgatgcgtattat
aaattacggcatatcgtggatgaagtcaatggattgatagcgatgtactcagagagtgaa
gagcagacggtcatgtctccagttcttggcaacgtctgctttgcgagttcttactacaga
ttctgcttcacgctgcgatcgttttctgccatatacgccgattcttacgaggaattgaac
gctgatgagtttgcaagacggttatggggtgatctctatttccacacgaaaagtcggaga
ttcttaaagaaggccccttcgtccactgcatcgagaagttttgttgaattcatcctggag
cccctctataagatattcgcccaaatcgtcggcgacgtggacgagggcctaccgcagacc
tgtgacgaacttggcatcggtctcaccaaagaggagagaaatatgaatattaggccattg
ctgcagattgtactgaggaagttctttggggatttcactggttttgttgacatgtgcgtg
cagcatgtcccttcaccatatgccaatgcccagaacaagatcgagcacatctataccgga
ccagtcgacacagagttggcagacgctatgacatcatgcgatccagatggcccgttgatg
gtgcacacgaccaagatgtaccccacagctgacttgaccgtgttccacgtgttcggccga
gtgatgtcgggcatcctgtacgcaaaccaagacgtcaagatccttggtgagaactactcg
ctgcaggatgaagaggactcgagatttggtcaggtggggcggctgtggatttttgaatcg
agatatcgagtcgaggtgaaccgtgtcccagcaggaaattgggtgctgatagaaggcgtc
gacacgccaatcgtaaagactgccacgattaccgaatcaactggaaacgaggaggcacac
atctttagaccgctcaaattcaatacaagctcggtaatgaagattgccgtcgagccagtg
aatccgtcagaactgccgaaaatgttggacgggttgaggaaggtgaacaagagctatccc
ttgctcacaacaaaggttgaggaatctggtgagcacgtcatcctgggtaccggcgagttg
tatctggattgtgtgatgcacgacctgaggaagatgtactcggagattgaaatcaaggtg
gcggatccggtcgtttcgttctgtgagacggtggtcgacacatcgtcattgaaatgtttt
gccgaaactccaaacaaaaggaacaaggtcacaatgatagcagagccgcttgagaagggt
ctggctgaggacatcgaaaatgaggtcgtccaaatcacatggccgaggaagcggcttgga
gaattcttccagacgaagtacgattgggatttgttggctgctcgatcgatttgggcattc
ggccctgatgctaccggtccgaacattcttgtggacgacacactgccatctgaggtggac
aaaaatttattaggttctgtcaaggacagtatcgtgcaaggtttccagtggggaacacgg
gagggtccactctgtgatgaaccaatcagaaacgtcaagttcaagatcctcgacgccgtc
attgcccaggagccaatccaccgtggaggaggtcaggtgatcccgacagccaggagagtg
gcctactcggctttccttatggcgacacctaggctgatggagccgtactacttcgttgaa
gtccaggcgccggctgattgtgtgtccgctgtgtatactgtcttggcgcgaagaagaggt
cacgtcacccaggatgctccagttcctggatcaccgctgtatacgatcaaagcattcctt
cccgccatcgactcgtttggctttgagacagacttgcggacacatacgcagggacaggcg
ttctgtttgtccgtcttccaccactggcagattgtgcctggtgaccccctggataagagc
atcatcatacgaccgctagagcagcagccagccactcacttagcaagagaattcatgatc
aagacacggcgaagaaagggcctgagcgaagacgtcagcatcaacaagttcttcgacgat
cctatgttgttggagttggccaagcaagatgtcatgttgaactatcctatgtag
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