Lineus longissimus (bootlace worm): 135501050
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Entry
135501050 CDS
T09977
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon04137
Mitophagy - animal
llon04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135501050
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
135501050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135501050
04121 Ubiquitin system [BR:
llon04121
]
135501050
Enzymes [BR:
llon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135501050
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
135501050
Ubiquitin system [BR:
llon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
135501050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
TRAF_BIRC3_bd
zf-C3HC4_2
zf-RING_5
PRP21_like_P
Crescentin
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
135501050
NCBI-ProteinID:
XP_064648845
LinkDB
All DBs
Position
17:9642374..9665508
Genome browser
AA seq
506 aa
AA seq
DB search
MAQPPEVGYERNIFIDHVDEKFLCAECSLVLRLPRQSQCGHRFCLNCATRASGNTCKACR
AEGAVAEYSSINPSQMFPDRAVEKEIQQKKVKCPNQGCIFQGICRGYDEHEQQCRFKPAI
CRRCENSVPESMLEEHMKTDCPERIIKCRFCQQSFRNIDKEQHNYSCPKFPLRCGGCEKT
KIPRDVMNDHILSCETACPYQCLGCAPVPVRDLPGHFKEHSQNHQLLLIKGVLGKDNKLA
QEVDNYLKSSVGGLEGRLRVVEQGGASAGPLSARNEECYQQLVVHTEVIKVLKNEISTLH
QACNTVAEGAQAQQSRIVELENKVRQLERTLSLKDVGLAEQDLRIRSLELTSYEGTLLWK
ITDFKKKRDEAIAGRTISVYSPAFYTSRTGYKMCGRIYLNGDGMGKGSHISLFFVIMRGH
YDNIQKWPFRQKVTFMLLDQNQHEHVIDAFRPDPNSTSFKCPTSEMNIASGCPLFVPLTH
LENASSAYVKDDTIFIKIIVDCSDLN
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaccgcctgaagtgggctatgaaaggaacatcttcatcgaccatgtagacgag
aagttcctttgtgctgagtgcagcctggtcctacgactaccaagacaaagccaatgtgga
catcgcttttgtctcaactgtgccactcgagcttctggaaacacctgtaaggcatgtcgt
gcagaaggagctgttgccgaatacagttcaataaatccgtcgcagatgttccctgatcga
gcagttgaaaaagaaatacaacaaaagaaagtgaaatgtcccaaccaaggctgcatattt
cagggtatctgcaggggatatgacgaacatgaacaacagtgtcgcttcaaacctgcaatc
tgccgtcgttgtgaaaactctgttcccgaatcgatgctagaggaacacatgaaaacagat
tgccctgaacgcattatcaagtgccgcttctgtcaacagagtttcaggaatatagacaaa
gaacaacacaactacagttgtcccaagtttcccttacgctgtgggggctgtgaaaagacc
aagatcccccgtgacgttatgaatgatcatattttgtcgtgtgagaccgcatgtccctac
caatgtcttggatgtgcccctgttccagtgcgagaccttccaggtcatttcaaggagcat
tctcaaaatcatcaactcctgttgatcaaaggtgtcctggggaaagacaacaagctcgca
caggaagttgataactatctgaagtcaagtgttggcggattggaagggcggcttcgcgtt
gtcgagcagggtggtgcgtctgcaggtccactttctgccagaaatgaagagtgttatcag
caactggttgttcacacagaggtcataaaggtgctgaagaatgagatcagtaccctccac
caagcatgcaacacagttgccgaaggcgcccaggcacagcagtccaggatcgttgagttg
gagaacaaggtcaggcagctagagcgcacgctgtccctgaaggatgtcggccttgcagag
caggatctgcgcatacgctccctggagttgaccagttatgagggcaccttgctctggaag
atcactgacttcaagaagaaacgtgacgaggccatcgctggacgcaccatcagcgtgtac
tcgcctgccttctacacatcacgcacagggtacaagatgtgcggcaggatctacctgaat
ggcgatggtatgggcaaggggtcccacatctccctgttcttcgtcattatgcggggtcac
tatgacaacatccagaagtggccgttcaggcagaaggtcactttcatgctgttggatcag
aaccaacatgagcatgtgatagatgcgttcaggcctgaccctaacagcacatctttcaag
tgcccaacatcagagatgaacatcgcaagcggatgccctctgtttgtaccgttgacgcac
ttggaaaatgcgagcagcgcatatgtcaaagatgacacaatttttatcaaaatcattgtc
gactgtagtgatttgaattaa
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integrated database retrieval system
