Lineus longissimus (bootlace worm): 135502735
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Entry
135502735 CDS
T09977
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
llon
Lineus longissimus (bootlace worm)
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llon03036
]
135502735
03400 DNA repair and recombination proteins [BR:
llon03400
]
135502735
Chromosome and associated proteins [BR:
llon03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
135502735
DNA repair and recombination proteins [BR:
llon03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
135502735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMCHD1_S5
HATPase_c_3
SMC_hinge
HATPase_c
Motif
Other DBs
NCBI-GeneID:
135502735
NCBI-ProteinID:
XP_064651818
LinkDB
All DBs
Position
19:1591972..1621499
Genome browser
AA seq
1930 aa
AA seq
DB search
MYEYYASEGQNPLPYAFAELIDNSLAATADNLGVRQIEIRLHFDDTNPSKNVMVVLDNGK
GMAPKQLNNWAIYRLSKFIRKDKKRKFSAAEDGGAGNDDDDDNRPSTPGTAPRSLNSDIS
YFGVGGKQAVFFIGTSTRMISKPRDSRDVHELTISKEEFERKEKNKEAIYSGFIRNRKPG
DTSHLKDEDEVVRHLIEEEKDKDHFTAVVINGINQTHIPYMKTQAKSWARQLAHIYHYYI
HGPHGNMDKPDETRRPGSPFKNIDIEIKIFNKGHTTPKVISLRDISDDMQTQYIRSAVCN
FDFKATVEGTGVVEGVLRYHPFMYDRETYPSDAIDPRAEAFPEDDSDVNYSDIRPARGRR
AIYECYWNGRLIPYTTIDDFEWCSIPKKARGNIPLECFNRISGVLFTNDKFQVSTNKLTF
IDLEMKLRDKQCVFSRVIQGPRPQEKRTNIDKEFYNWLKECHEQCDKQIKFSHFTKQVSR
NDLPKNKQTPWAEYTHIEWDGKAFQKGQLVRIQRTLPVTYGRINRFLLFGDHEGDVFATG
GDIEIVQEPKTLYDEVKVYPLVKLDRTVTQEAIKKYIEEEEAKLPHKLKIAWPEGYEVTK
GEKRAAGKTVGAIKVEIANRKGEYISKLPGTVGSSKKLLVELKVIWHSPHGDEVIVSHIS
QHGKTWPYWFRKMENIKNLGQYTISIQAVLNESGANKFAGRELPMEKIKFTVTEAEPEKF
NVGLLEGPFRVGSPFQIPLEFQDGYNNLTKPSEKLEPKLEASGLELKYDQTEIKGNTLVI
KGIIAKGAVSSVTGQNFDLTVSVEALENSKQSLKIRLLPGPPQSIRVQPTEEPIEIENGQ
PANFTVCLLDEAGNVTTVPKVVLTAKFTGVPGLAHYLYTGDCTSTGHIVFTGEPLVMKKV
RGSQNLTAKIEVQVDGMRNIKAVERKLVIVPSSKASNMEVFYKYNGDKNLPIRAGSDING
VAGEMIKGITFKIFDEAGREIEMEDHLAKKVKVNWTPKLIKDLVLKGGLPDIKIPTSASD
TKYCHISINGTGVDFSFTIKPTPGEPAVLKCKCASTQMRIGETLDGEIVITLKDKKDNEI
KNLPSSAIDDLEVSGDDLNIHEIDKSINGNTFVIKGVKFEGNSLGGKELKIKWKELTEYV
RLQMVSGPPAKLTIPGWDLTQAVAVFNERKFEKPLIVQVCDELGNPTSDPEVKVQLAKDT
GIKLSPAPQPTKVDKAGQVNFGNLIVTAKTGSYEIQPKALYGKVALSGPKLKISVTPDAA
KPVSIKLQYDKNAVYVVGFSMPSYTVEVIAEDDTLMTAAQPSYLTMRLWRADNINPKPPD
SGSGSKLAISYSPDPRKETDKDGIFVFSNKKVPELAGMHSVVFIYNDGKHEVLSNQVAIN
VSPGSPAKLVPVYPPGTLTVSNTSKAGARSLIKSVKFELRDKYENKTGHNINGVMAMEIM
STDGTTHEVPNFVGQTRRKETPMSQGQAMAANLTIEEDSPGKDGVQYILRVSILSQKLEQ
FKIPHYDIPFLFYNDARKQTQMSALTKERDNLKQNIKAYESLFETTQMLIKELQILVNEA
TKEEKRIKDELKKQKIPESQINNKKNLERLIDHRIKERDELINRPRRVCTVPLAPKENEV
LGKVCHLAQAEDEDSARVLSWHMSADMDCVVTHTLKKAKDIYSKSGGKQQVLPLESIYRK
TLPDWNKPLPHVRFRPNWKPQGNPMYARNLLIFPHDPDNCKLVFGMLLGDTIILDNLDHA
NAYRHEIVRFTHCPTILTRTGDRIRSNGKFGGLMNKALPIERLRGMVFGAPLPMAYHAVC
TQIDVLQSYREALVKREKATNDLQEQLNNQKTVEMKTKNREYNDAKSQLGQIESRLGMCK
QPEQDKQESMDTNENENNAKDINKSRGRRSAAADDGPSAKKSRQASPAVNGSPAQGTRRP
KRNIQSPRKF
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaatattatgcttcagagggacagaacccattgccatatgcctttgccgagctg
attgacaactctttggcagccacagctgataacctgggggttcgtcagattgaaattaga
ttgcattttgacgacacaaacccatccaagaatgtgatggtagtcctcgacaacgggaag
ggcatggcaccaaaacaactgaacaactgggccatctacaggctgtcaaagttcatccgc
aaggacaagaaacgtaaattctctgctgcagaggacggaggggcagggaatgatgacgat
gatgataaccggccctccacccccggcactgcaccaagatctctcaactcagacatctca
tattttggagtaggtggcaaacaggccgttttcttcatcggaacatccaccaggatgatc
tccaaaccaagggactcccgcgacgtccacgagctgactatctccaaggaagagtttgag
aggaaggagaaaaataaggaggccatatacagtggtttcatcagaaacagaaagcccggc
gatacaagtcacttgaaagatgaagacgaagttgtacgccatctcatcgaagaagaaaaa
gacaaagaccattttaccgctgtcgtcatcaatggtatcaaccagacacacattccatat
atgaagacacaggccaaatcctgggcaagacaattagcacacatctatcactattacatc
catggcccacatggcaacatggacaaaccagatgaaacgaggcgaccaggaagcccgttc
aaaaatatcgacattgagatcaaaatcttcaacaaaggtcacaccacgcctaaagtcatc
agcttacgagacatcagcgatgacatgcagacacagtacatacgctcagccgtctgtaac
ttcgacttcaaggcgaccgtggaggggacgggggtagtcgagggggtgctgcggtaccat
ccgttcatgtacgaccgagagacgtacccatctgatgccatcgaccccagagccgaagcg
ttcccggaagacgacagtgacgtcaactattctgacatcagaccggcccgaggccggagg
gcgatttatgagtgttactggaacggccggctgattccatacacgacgattgacgatttt
gaatggtgcagcatcccgaagaaagccaggggcaacatcccactggaatgtttcaacagg
atctctggtgttctcttcacaaacgacaagttccaagtcagcacaaataagttgaccttc
atcgaccttgagatgaagctaagagacaagcagtgcgtgttcagtcgggtcatccaggga
cccaggcctcaggaaaagaggacaaatatcgacaaagagttctacaactggttgaaggag
tgtcacgagcagtgtgacaaacagatcaagttctctcacttcactaaacaagtatcgagg
aatgacctgccgaaaaacaagcagacgccgtgggcagagtacacgcacatcgagtgggat
gggaaggctttccagaaaggtcaactggtgcggatacagagaacactgccagtgacctac
ggtagaatcaaccgcttcttactcttcggggaccacgagggcgacgtgtttgccacaggt
ggcgacattgagatcgtccaggaaccaaagacgttgtacgatgaggtgaaagtctacccg
ctggtgaagctggaccggacagtgacgcaggaagcgatcaagaaatatatcgaggaggaa
gaggcaaaactccctcacaaattgaaaatcgcgtggccggagggatacgaagtgacgaag
ggtgaaaagagagcggcgggaaagacagtcggtgccataaaagttgagattgccaatagg
aagggagagtacatcagcaagttgcctgggacggtcggctcgtccaagaaactgctggtg
gagcttaaagttatatggcattcaccacatggtgatgaagtcattgtctctcacatcagt
cagcacggcaagacctggccctactggttcagaaagatggaaaacatcaaaaatcttgga
caatacacgatttctatccaagccgtcttaaatgagagcggagcgaataagtttgctggt
cgggagctcccaatggagaaaatcaaattcacagtcacagaggcagagccggaaaagttc
aacgtcggtctcctggagggtccgttccgagttggctcaccattccagattccgttagaa
ttccaggacggatacaacaacctcacaaaaccaagtgaaaaactggaaccaaaactagaa
gcaagtggcctcgagttgaagtacgaccaaacagaaatcaaaggcaatacattggtcatc
aagggcatcatagctaaaggtgccgtcagctctgtgaccgggcaaaacttcgatctgacg
gtgagcgtagaggctctagagaactcaaaacagtctctcaagattaggttactccctggt
ccgccccaatccatccgggtacagccgacagaagagccgattgaaatcgagaacggacag
ccagcaaactttaccgtctgtctgttggatgaagcgggcaatgtgacaacagttcctaaa
gtggtgctgacggcaaagttcacaggtgtgcccggcctcgcccattacctctacactgga
gactgtacaagcaccggtcatatcgtgttcacaggcgagcccctcgtcatgaagaaagtg
cggggatcacagaacctcactgctaagatcgaagtgcaggtagatggtatgcgaaatatc
aaagccgtggagagaaagctggtcatcgtgccgagttctaaggcaagcaacatggaggta
ttctacaagtataacggagataaaaatctccctatcagagcagggtctgacatcaatggt
gtggctggtgaaatgattaaaggaattactttcaaaatctttgacgaagctggtcgggaa
atagaaatggaggaccatttggccaagaaagtcaaagtgaactggacgcccaagttaatc
aaagacctggtcttgaaaggcggcctgcctgatattaaaataccgacgtctgcttccgac
accaagtattgtcatataagtatcaatggaactggggtggatttctctttcacgatcaaa
cctacccccggtgagccagctgtgttgaagtgtaaatgcgcatcgacccaaatgaggatc
ggtgaaacacttgacggcgagatcgtcatcaccctcaaggataagaaagacaatgaaatt
aaaaatttacccagcagtgcaatagatgacctcgaggtctcgggcgatgatctgaacatc
cacgaaatcgacaaaagcatcaacggcaatacgtttgtgatcaaaggagtcaagttcgag
ggcaacagtcttggcgggaaagaactcaagatcaagtggaaggagttgacggaatatgtt
cggctacagatggtgtccgggccgccggcaaagttgaccattcctggatgggatttaacg
caggcagtggctgtcttcaacgagcgcaagtttgagaagccattgatcgtacaagtgtgt
gatgagttaggcaacccgacctccgaccctgaggtcaaagttcaactggcgaaggatact
ggcatcaagctatctcccgcaccacaacccaccaaagttgacaaagctggacaagtgaac
ttcggcaacttaattgtgacagcgaaaactgggagttatgagattcaacccaaagctctc
tacgggaaggtcgcgctgtcaggtccgaagttaaagatcagcgtgacgccagatgctgcc
aagcctgtttccattaagttacagtatgacaagaatgctgtctacgtggtcggattctca
atgccatcctacacagtcgaagttatagcagaagacgacacactcatgacagccgcccag
ccatcgtatctgaccatgcggctctggagggcggacaacatcaaccctaaaccaccagac
tcgggttcaggaagtaaactggccatatcgtacagtcctgacccaaggaaagaaactgac
aaagatgggatatttgtgttcagcaacaagaaggtgcctgagttagccggcatgcacagc
gtagtcttcatctacaatgacggcaaacacgaagtcttgagcaaccaagtggcgatcaac
gtgtcaccaggatcgccggcgaaactagttccagtctacccacctgggacgctgacggtg
tcgaatacgtctaaagctggagccaggtcactgatcaagagtgtcaagtttgaacttcgg
gacaaatatgaaaacaaaaccggccacaacatcaatggcgtgatggcgatggagatcatg
tcgacagacggcacgacgcatgaggtgccaaactttgtcggtcagaccagacggaaggaa
accccgatgagccagggtcaggctatggcagcaaatctaacgatagaagaggacagccca
ggaaaagatggcgtccagtacattctgcgtgtgtccattctcagccaaaagttagaacag
ttcaagattccacactacgatattccattcctgttttataacgatgcccggaaacaaact
cagatgtcggcactgaccaaggagagagacaacctcaaacagaacatcaaggcgtacgaa
tcgttgtttgagacgacacagatgttgatcaaggagttacagattctcgtgaatgaagcc
accaaggaagagaaaagaatcaaggacgaactcaaaaaacagaaaattcctgagtcacaa
attaataataaaaagaatctcgagcgtttaatcgaccaccggataaaagaacgagacgag
ctcatcaaccgaccacgccgagtctgtactgtacccctggcaccgaaggaaaacgaggtg
ttaggcaaagtgtgccatctcgcccaggctgaggacgaggattcggcgcgtgttttatct
tggcacatgtcagctgatatggactgcgtggtcacgcatactcttaaaaaggcgaaagat
atttactcaaaatctggaggcaaacagcaagtgctgccgctggaatctatatacagaaaa
acactgcccgattggaataaaccattaccccatgttagatttcgccccaactggaagcca
cagggtaacccaatgtatgccaggaatctgctgattttcccacacgacccagacaactgt
aaattagtatttggcatgctcctcggtgacaccataatcctggacaacttagaccacgcc
aacgcctaccgacacgaaatcgtgagattcacccactgccccacaatcctgaccagaacc
ggcgaccgcatccgtagcaatggaaagttcggaggtctgatgaacaaagcattgccaatt
gaacgtctgcggggtatggtgtttggtgccccactgccaatggcctaccatgctgtctgt
actcaaatagacgttctccagagttaccgagaggcgctcgtgaagagagagaaggcaacc
aatgatctccaggagcagctgaacaaccagaagactgtcgagatgaagaccaagaaccgg
gaatataacgatgccaaaagtcaactcggccagattgagtcaagacttggaatgtgcaag
cagccagagcaggacaaacaagaaagcatggacacgaatgaaaatgaaaacaatgcaaag
gacattaataaaagcagggggcgccgctcagctgctgcagacgacgggccgtctgctaag
aaaagtcgccaggcatcacccgcagttaacggaagtcctgctcaagggacaaggcggccg
aaacggaacattcagtcaccgagaaaattttaa
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