Litorivicinus lipolyticus: GH975_04125
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Entry
GH975_04125 CDS
T06278
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
llp
Litorivicinus lipolyticus
Pathway
llp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
llp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GH975_04125 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llp03400
]
GH975_04125 (nth)
Enzymes [BR:
llp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GH975_04125 (nth)
DNA repair and recombination proteins [BR:
llp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GH975_04125 (nth)
Prokaryotic type
GH975_04125 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QGG79802
UniProt:
A0A5Q2QC03
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All DBs
Position
complement(807874..808515)
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AA seq
213 aa
AA seq
DB search
MNAQKRLEIFTRLRDENPAPKTELEYASPFELLVAVTLSAQATDVGVNKATRKLFPVANT
PQAVYDLGVDGLKGYIKTIGLFNSKAENVHKACRLLLDLHGGEVPEDREALEALPGVGRK
TANVVLNTAFGHAAMAVDTHIFRVSNRTRIAKGKTVRQVEDGLMKHVPKAFLVDAHHWLI
LHGRYTCKARKPECGRCLIEDLCEFNEKREYLD
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccaaaagcgcctcgaaatctttacccggctgcgtgacgaaaacccggcgccg
aaaaccgaattggaatacgcctcgccgtttgagctgttagtggccgtgacactgagcgcc
caagccaccgatgtcggcgttaacaaagccacgcgcaagctgttcccagtcgccaatacc
ccccaagccgtttacgacctgggcgttgacggtttaaagggttacatcaaaaccatcggc
ttgtttaattccaaagccgaaaacgttcacaaggcctgtcgcttgttgctggacttgcac
ggcggcgaggtgcccgaggaccgcgaagcactggaagcattgcctggcgtcggccgcaaa
accgccaacgtggtcttgaacaccgcctttggtcacgccgccatggccgtggacacgcat
atttttcgggtcagcaaccgcacccgaatcgccaaaggcaaaaccgttcgccaggtcgag
gacgggctgatgaagcacgtacccaaagcgtttttggtcgatgcccaccactggcttatc
ttgcacgggcgctatacctgtaaggctcgcaaacccgagtgcggccgctgcctgatcgag
gacctgtgtgaattcaacgaaaagcgcgagtacctggactag
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