Lutra lutra (Eurasian river otter): 125080072
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Entry
125080072 CDS
T08100
Name
(RefSeq) integrator complex subunit 4 isoform X1
KO
K13141
integrator complex subunit 4
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llv03041
]
125080072
Spliceosome [BR:
llv03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
125080072
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Gene cluster
GFIT
Motif
Pfam:
INTS4_8HBD
HEAT
HEAT_2
PDS5
Cnd1
Adaptin_N
SCD
Vac14_Fab1_bd
TOR1L1_N
CLASP_N
Cohesin_HEAT
INTS7_N
TPR_TTI1_C
Cnd3
Motif
Other DBs
NCBI-GeneID:
125080072
NCBI-ProteinID:
XP_047549864
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All DBs
Position
10:52637882..52759912
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AA seq
853 aa
AA seq
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MDDAINILQNEKSHQVLAQLLDTLLAIGTKLPENQAIQMRLVDVACKHLTDTSHGVRNKC
LQLLGNLGSLEKSVTKDGEGLAVRDVQKIIGDYFSDQDPRVRTAAIKAMLQLHERGLKLH
QTIYNQACKLLSDDYEQVRSAAVQLIWVVSQLYPESIVPIPSSNEEIRLVDDAFGKICHM
VSDGSWVVRVQAAKLLGSMEQVSSHFLEQTLDKKLMSDLRRKRTAHERAKELYSSGEFSS
GRKWGDDAPKEEIDTGAVNLIESGACGAFVHGLEDEMYEVRIAAVEALCMLAQSSPSFAE
KCLDFLVDMFNDEIEEVRLQSIHTMRKISNNITLREDQLDTVLAVLEDSSRDIREALHEL
LCCTNVSTKEGIHLALVELLKNLTKYPTDRDSIWKCLKFLGSRHPTLVLPLVPELLSTHP
FFDTAEPDMDDPAYIAVLVLIFNAAKTCPTMPALFSDHTFRHYAYLRDSLSHLVPALRLP
GRKLVSSAVSPSIMPHEDPSHQFLQQSLERVYSLQHLDPQGTQELLELTIRDLQRLGELQ
SELAGVADFSATYLRCQLLLIKALQEKLWNVAAPLYLKQSDLASAAAKQIMEETYKMEFM
YSGVENKQVVIIHHMRLQAKALQLIVTARTTRGVDPLFGMCEKFLQEVDFFQRCFIADLP
HLQDSFVDKLLDLMPRLMTSKPVEVVKILQTMLRQSTFLHLPLPEQIHKASATIIEPAGE
SDNPLRFTSGLVVALDVDATLEHVQDPQSTVKVQVLYPDGQAQMIHPKPADFRNPGPGRH
RLITQVYLSHTAWTEPCQVEVRLLLAYNSSSRIPKSPWIEGGEVSPQVETSIEGTIPFSK
SVKVYIMPKPARR
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgccattaacatcctgcagaatgaaaagtctcatcaagtcctagctcagctg
ttggacactttgcttgcaattggcactaaactcccagagaatcaagctatccagatgcga
ttagttgatgtagcctgcaagcacctcacagatacctcccatggtgtaagaaataagtgc
ctgcagttacttggcaatcttggctctttggagaaaagtgtcacaaaagatggagaaggc
ctagctgtcagagatgtccagaagattataggggattacttcagtgaccaagacccacgt
gtcagaacagcagctataaaagccatgttgcagctccatgaaagaggactgaaattacac
caaacaatttataatcaggcctgtaaattgctgtctgatgactatgaacaagtgcgcagc
gctgcagtccaacttatctgggttgtcagtcagctctatcctgaaagcattgtcccaatt
ccttcttctaatgaagaaattcgcttagttgatgatgcgtttggaaaaatttgtcacatg
gtcagtgatggctcctgggtggttcgagttcaggctgcaaagctattgggctcaatggaa
caagtcagttctcatttcttggagcagacactggacaagaagctcatgtctgatcttagg
agaaaacgcactgcacatgaacgtgccaaggagctttacagctcaggagagttttccagt
ggcagaaagtggggagatgatgctcccaaggaagaaatagatacaggagctgtgaacttg
attgagtcaggagcttgtggagcctttgttcatggattggaagatgagatgtatgaggtc
cgcattgctgccgtggaggctctctgcatgctggcccagtcttcaccctcttttgcggag
aagtgccttgatttcctggtggacatgtttaatgatgaaatcgaggaagtacgtctgcag
tccatacacaccatgagaaaaatctccaacaatatcactctccgagaggatcagcttgac
actgtcctggctgtgttagaggattcatccagagatattcgagaggctcttcacgaactt
ttgtgctgtactaatgtttcaaccaaagaagggattcatcttgcactggtggagctgctg
aaaaatttaaccaagtaccctactgatagggactccatatggaagtgcttaaagtttctg
ggaagtcggcatccaaccctggtgcttcccttggtgccagagctcctgagcacacatcca
ttttttgacacagctgaaccagacatggatgacccagcttacattgcagttttggttctt
atttttaatgctgctaaaacctgtccaacaatgccagcactgttctcagatcataccttc
agacactatgcctacctccgagacagtctttctcatcttgttcctgccttaaggttacca
ggtagaaaactagtgtcatcggctgtttcccccagtatcatgcctcatgaggacccttcc
catcaatttctgcagcagagccttgaaagagtgtacagtcttcagcacctggaccctcag
ggaacccaggagctgctggagctcaccatcagagatcttcaaagacttggagaacttcag
tctgaactagcaggagtcgctgacttctctgctacctaccttcggtgtcaacttcttctt
atcaaggccctgcaagaaaagctgtggaatgtggctgcccctttgtatttgaagcagagt
gatttggcctctgcagcagcaaaacagatcatggaagagacctacaaaatggagttcatg
tacagtggtgtggagaataaacaggtggtgattatacatcacatgaggctgcaggccaaa
gccttgcaacttatagtaacagctcggactactcgaggagttgaccccttatttgggatg
tgtgaaaagtttttacaggaagtggacttttttcagaggtgttttatcgctgatttgccc
cacctacaggacagttttgtggacaaacttcttgaccttatgccccgacttatgacatcc
aaaccagtagaagtggtcaaaattctacagaccatgctgcggcagagtacctttttgcac
ctcccccttccagaacagatccacaaagcttcggccaccatcatcgagccagcaggcgag
tcagacaatcctttgcggtttacatccgggttggttgtggccctggatgtcgatgcaacc
ctggaacacgtgcaggaccctcagagtactgtgaaggtccaggtcttatatccagatggc
caggctcagatgattcatcctaagccagccgacttccggaatcctggcccagggcgccac
cggcttatcactcaggtgtacctctcccacactgcctggacagaaccatgccaggtggaa
gtcaggctgctgctggcctacaactccagttctcgcattccaaaatccccgtggatcgag
ggtggtgaggtttcaccccaggtggaaaccagcatcgagggcaccatccccttcagcaag
tctgtgaaagtttacataatgcccaaacccgcaaggcgctga
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