Lutra lutra (Eurasian river otter): 125082001
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Entry
125082001 CDS
T08100
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03018
RNA degradation
llv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125082001
09123 Folding, sorting and degradation
03018 RNA degradation
125082001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125082001
03041 Spliceosome [BR:
llv03041
]
125082001
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125082001
mRNA degradation factors
5'-3' decay
Lsm complex
125082001
Spliceosome [BR:
llv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
125082001
Complex C
U2 snRNP components
125082001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
RimP_C
Motif
Other DBs
NCBI-GeneID:
125082001
NCBI-ProteinID:
XP_047553015
LinkDB
All DBs
Position
12:complement(84354042..84354371)
Genome browser
AA seq
102 aa
AA seq
DB search
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgtggaccagcaacaaaccaccaacaccgtagaagagcccctggatctc
atcaggctcagcctggatgagcgaatttatgtgaaaatgagaaatgacagagagcttcga
ggcagattacatgcttatgatcagcatttaaatatgatattgggagatgtagaagaaact
gtgactactatagaaattgatgaggaaacatatgaagagatatataaatcaacaaaacgg
aatattccgatgctttttgtccggggagatggtgttgtactagttgcccctccattaaga
gttggctga
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