KEGG   Lutra lutra (Eurasian river otter): 125082448
Entry
125082448         CDS       T08100                                 
Name
(RefSeq) GTP-binding nuclear protein Ran
  KO
K07936  GTP-binding nuclear protein Ran
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03008  Ribosome biogenesis in eukaryotes
llv03013  Nucleocytoplasmic transport
llv03250  Viral life cycle - HIV-1
llv05166  Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    125082448
   03008 Ribosome biogenesis in eukaryotes
    125082448
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    125082448
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    125082448
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:llv03019]
    125082448
   03009 Ribosome biogenesis [BR:llv03009]
    125082448
   03016 Transfer RNA biogenesis [BR:llv03016]
    125082448
   03036 Chromosome and associated proteins [BR:llv03036]
    125082448
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:llv04147]
    125082448
   04031 GTP-binding proteins [BR:llv04031]
    125082448
Messenger RNA biogenesis [BR:llv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     125082448
Ribosome biogenesis [BR:llv03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    125082448
  Pre-60S particles
    125082448
Transfer RNA biogenesis [BR:llv03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    125082448
Chromosome and associated proteins [BR:llv03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     125082448
   Spindle formation proteins
    125082448
Exosome [BR:llv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125082448
GTP-binding proteins [BR:llv04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    125082448
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RNA_helicase G-alpha Pox_A32 AAA_24 ArgoMid Septin AAA_7 SRPRB TsaE AAA_16 DUF5906 AAA_22
Other DBs
NCBI-GeneID: 125082448
NCBI-ProteinID: XP_047554084
LinkDB
Position
12:complement(78885473..78888377)
AA seq 216 aa
MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK
FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLC
GNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMP
ALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL
NT seq 651 nt   +upstreamnt  +downstreamnt
atggctgcccagggagagccccaagtccagttcaaactggtgctggttggcgacggcggc
accgggaagacgacgttcgtgaagcgtcacctgacgggggagttcgagaagaagtatgta
gccaccttgggcgtggaggtccacccgctcgtgttccacaccaacaggggacccatcaag
ttcaacgtgtgggacacggccggccaggagaagttcggcggcctgcgggacggctactac
atccaagcccagtgtgccattataatgttcgatgtcacgtcaagggttacttacaagaat
gtgcctaactggcatagagatctggtacgagtgtgtgagaacatccccattgtgctgtgt
ggcaacaaagtggacattaaggacaggaaagttaaggcaaaatctattgtcttccaccga
aagaagaatcttcagtactatgacatttctgccaaaagtaactacaactttgaaaagccc
ttcctgtggcttgctagaaaactaattggagaccctaacttggagtttgtcgccatgccc
gctctcgccccgccagaggttgtcatggacccagctttggcagcacagtatgagcacgat
ctagaggttgctcagacaactgctctcccggatgaggatgatgacctgtga

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