Lutra lutra (Eurasian river otter): 125085644
Help
Entry
125085644 CDS
T08100
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03013
Nucleocytoplasmic transport
llv05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125085644
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125085644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125085644
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125085644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_3rd
Ig_NUP210_13th
Ig_NUP210_5th
Ig_NUP210_2nd
Ig_NUP210_15th
Ig_NUP210_7th
Ig_NUP210_9th
Ig_NUP210_14th
Ig_NUP210_1st
Ig_NUP210_6th
Ig_NUP210_8th
Ig_NUP210_4th
Ig_NUP210_16th
NUP210_Ig
Big_2
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-GeneID:
125085644
NCBI-ProteinID:
XP_047560099
LinkDB
All DBs
Position
15:69466782..69560543
Genome browser
AA seq
1912 aa
AA seq
DB search
MMAFGAPRPGCGRPFGGGPAAGVLLLLQCLVGTRASKLNVPQVLLPFGREPGRVPFLLEA
QRGCYTWHSSHHDAVTVEPLYENGTLCSQKAVLIAESTQPIRLSSIILAREIVTDHELRC
DVKVDVVDRIEIISRTRELYVDDSPLELMVRALDAEGNTFSSLAGMMFEWSIAQDNESAR
EELSSKIRILKYSEAEYSPPVYIAEMEKEEKQGDMILVSGIRTGAAVVKVRIFEPFYKKV
AAALIRLLVLENIFLIPSHDIYLLVGAYIKYRVAKMVQGRMTEVGFPLEHYTLELQDDRV
ACNWSLSGKVALLDEKRAMVTAVQLGQTNLVFVHKNVHMRSVSGLPNCTIYVVEPGFLGF
TVQPGDRWSLEVGQVYVMMVEVFDKSSTKVYMSDNLRIMYRFQSEYFEEQLTTVNGSYHV
VKALKSGVVVINASLTSIVYQNKNIQPIKFPVIHQQEVNIYFPIKLTPNFLAFPHQPMGI
LYRYKVQVEGGSGNFTWTSSNETVAMVTTKGVVTAGQVRGNSTVLARDVQNPFRYGEIKI
YVLKLNKMELLPFHADVEIGQIIEIPIAMYHVNKEHKDVIMFTDCSHLLLDLNMDKQGVF
TLLKEGTQRPGPTHCSSTHIAAKSLGHTLVTVSVTESEEYLESSATFAAYEPLKAVNPVE
VALVTWQSVKEMVFEGGPRPWILEPSRFFLELSMEKTEKIELTQVRLPAKRKQNQYIYRV
LCLGLGEQALTFRIGNHPGVLNPGPAVEAVQVRFMCAHPASMSVTPVYKVPAGAQPCPLP
QHKQLLIPVSSLRDTVLELAVFDQHRRKFDNFSSLMLEWKSSNETLAHFENYNSVEMVAK
DDGSGQTRLHGHQVLKVHQLKGTVLIGVNFVGYSEKKSPEKLSNLPRSAAVELLLVDDVT
VLPENATIYNHPDVKEIFSLVEGSGYFLVNSSEQDIVTVTYMEAESSIQLVPVHPGFLTL
EVYDLCLAFPGPAVAYLRVSDIQELELDLIDKVEIGKTVLVTVRVLGSSKRPFRNKYFRN
MELKLQLASAVVTLTLMEEQDEYSENYILRAVSVGQTTLVAIARDKMGRRFTSAPRQIEV
FPPFRLVPEKMTLIPANMMQVMSEGGPQPQSIIHFSISNQTVAVVNRRGQVTGKVVGTAV
VHGTIQTVNEDTGKVIVFSQDEVRVEVVQLRAVRVLAATTRLITATEMPVYVMGVTSTQT
PFSFSNANPGLTFHWSMSKRDVLDLVPRHSEVFLQLPVENNFAMVVHTKAAGRTSIKVTV
RCMNSSSGQLEGNLLELSDEVQILVFEKLQLFFSECQPEQILMPMNSQLRLHTNREGAAF
VSSRVLKCFPNSSVIEEDGEGLLKAGSIAGTAVLEVTSVEPFGVNQTTITGVQVAPVTYL
RMSSQPKLYAARGRALPAFPVGMSLTFVVQFYNSIGEKFHTHNTQLHLALNRDDLLLIGP
GNRNYTYVAQAVNTGVTLVGIWDRRHPGVADYIPVAVEHAIMPDTQLTFVGDVICFRTHL
LNHNGEPGIWMISADNILQTDTATGVGVARSPGIATVFHDIPGVVKTYREVVVNASSRLT
LSYDLKTYLTNTPNSTVFKLFITTGRNGANLKGSCTPSQALAITTVLLPETLVLCHVQFS
NTMLDIPASKVFHVHAGFSMERGVYVCLIRVRPQSEELLQALSVADTSVYGWATLVSERS
KNGMQRILIPFIPAFYINQSELVLSRRQDVGEIRVLGVDRVLEELKVFPSSPVLVVSGHR
QSSLTPGLAVYPVRVINFTSLQQTASPVFINISCELTSQSEAVLVRALKKAGADQCEASG
IFQKFLGSHQTILFTLFAMLASTAFVFLAYNAFLNKIQTVPVVYVPTLGTPQPGKKEPPS
PMKRSNYSYSICFSFLLLGPYTSTTRPPPPFMSPQPRPGQTRLQHWLWSVRH
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atgatggccttcggggccccgcgtcccggatgcggccggccgtttggcggcgggcccgca
gccggcgtcctgctgctgcttcagtgcctggtggggacccgggccagcaaactcaacgtg
ccgcaagtgttgctccctttcggccgggagcccggccgcgtgcctttcctgctggaggcg
cagcgcggctgctacacctggcattcctcccatcatgatgcagtaactgttgagccttta
tatgaaaatggcaccttatgttcccaaaaagctgtgctcattgctgaatctacccaaccg
atacgcctcagcagtattattcttgctcgagagatagtgacggaccatgaactgcgctgt
gatgttaaggttgacgtggtagacagaattgaaattatatctcgaacccgggaactctat
gtagatgattcaccactggaactgatggtgagggcgttggatgctgaaggaaatactttt
agtagtttggcagggatgatgtttgagtggagcatcgcccaggataacgaatcagcaaga
gaagaattgtctagcaaaattaggattctgaaatactctgaagccgagtattctccccct
gtgtatattgctgagatggaaaaggaagagaaacaaggagatatgattttggtgtctggg
atcagaaccggtgctgctgttgtaaaagttcgaatttttgagccgttctataagaaagtg
gcagcagcattaatacgtctgttagttttggagaatatatttcttataccatcgcatgat
atatatctcttagtaggagcatatattaaataccgagttgcaaaaatggtgcagggaaga
atgacagaggtgggatttcccctagaacactatacactggaattgcaagatgacagagtt
gcatgtaattggtctctttctgggaaagtggctttactggatgagaaaagagctatggtg
actgctgttcaactgggccaaactaaccttgtctttgtccacaaaaatgtccatatgcga
tctgtgtctggactcccaaattgcaccatatatgttgtggagcctggatttttaggtttc
acagttcagcctggagaccgatggagtctagaggtgggacaagtgtatgtcatgatggtg
gaagtgttcgataagagcagtacaaaggtctacatgtcagataatctcaggatcatgtac
cggttccaaagcgagtactttgaggagcagctcactactgtgaatgggtcttaccacgta
gtcaaagccttgaaaagtggtgtcgtggtgataaacgcatccctgacttccatcgtctac
cagaataaaaatattcagcctataaaatttccagtcatacatcagcaagaagtgaatatt
tattttcccatcaagcttacacccaactttctggcatttcctcatcaacctatgggaata
ttatatcggtataaagtgcaggtagagggtggcagtggcaacttcacttggacctcttct
aatgagacagtagccatggtgaccactaaaggagtggtgactgcaggtcaggtcaggggg
aacagtactgttttggcccgagatgtacaaaatccctttcgatatggagaaattaagata
tatgtcctaaaactgaacaaaatggagctgttaccatttcatgctgatgtggagatcggc
cagattatagaaatccccattgcaatgtaccatgtaaataaggagcacaaagatgtcatc
atgttcacagactgctctcatttattgttggatctgaacatggataagcaaggagtcttt
actcttctcaaggaaggtactcaaagacctgggccaacacactgctctagtacacacata
gcagccaagtccctaggccataccctggtaacagtgagtgtgacggagtctgaggagtac
ttggagagcagcgccacatttgctgcttatgaacccctaaaggctgtaaaccctgtagag
gtggctttggtgacatggcagtctgtgaaggaaatggtgtttgaagggggcccccgtcca
tggatcttggagccctcccgattctttttggagttgagcatggagaaaacagagaaaatt
gaattaacacaagtccggctgccagctaagagaaaacagaaccagtacatctaccgggtc
ttgtgcctgggtttgggggaacaagctctgacattccgaattggaaatcacccaggtgtc
ctgaaccccggtccagctgtggaggccgtgcaggtgcgcttcatgtgtgcccatcctgcc
agcatgtccgtgaccccagtctacaaagtgccagctggcgcccagccatgccctctgcca
cagcacaagcaactgttgattcctgtatcaagcctgagggacaccgttctggaactggca
gtgtttgatcaacacaggagaaagtttgataatttcagttcactaatgctggaatggaaa
tcctcaaatgaaacactagctcattttgaaaattataattcagtggagatggtagcaaag
gatgacggcagtgggcagactcggctacatggtcatcaggtccttaaagtacatcagtta
aaagggactgtactcatcggagtcaattttgtgggctactcagagaagaaaagtccagag
aaactttccaacttgcccagatctgcagctgtggagctgctcctggtggacgatgtgacc
gtactgcctgagaatgccaccatctataaccaccctgatgtgaaggagatatttagcctt
gtggaaggatctggttattttctggtcaacagcagtgagcaggacattgtcactgtcact
tatatggaagcagaaagttctatccagttagttccggtacaccctggatttctcaccttg
gaggtctatgatctgtgcttggctttcccgggtccagcagtggcctacctcagggtgtca
gacatacaggagctggagctcgatctgattgataaggttgaaataggtaaaactgtgtta
gtgactgtgagggttcttggctcttccaaacgccccttccgaaataaatacttcagaaac
atggagctcaaactgcagttggcttctgccgttgtcaccctgacgctaatggaggaacag
gatgaatactctgaaaattatatccttcgagctgtttctgttgggcaaaccacacttgtg
gctattgccagggacaagatggggaggagattcacatcagctcctcgccaaattgaggtg
tttcctcccttcagacttgttccagagaaaatgacactgatcccagctaacatgatgcag
gtaatgtctgaaggtggcccccagccccaatctatcattcacttctctatcagtaaccag
actgtggctgttgtgaataggcgggggcaagtcacggggaaggtagttggcacagctgtg
gtccatggcaccatccagacagtaaatgaagatactggcaaagtcattgtgttttcccag
gatgaagtgcgcgttgaagtggtccagctcagggccgtgagggtccttgcagccaccact
cgactcatcacagcgactgagatgccagtttatgtcatgggagtgaccagtacccagacc
cctttctccttcagcaatgccaaccctggactcacattccattggtccatgagcaaaagg
gacgtattggatctagtacccaggcattcagaggtttttctacagctcccggtagaaaat
aactttgccatggttgtccacacaaaagcagctggtcggaccagtatcaaagtcactgtc
cgctgtatgaacagttcctctgggcagcttgaggggaatttattagaattgtctgatgaa
gttcagattctggtgtttgagaaactccaattgttcttttcggagtgccagcctgagcaa
attctgatgcccatgaattcccagctcagactccacaccaacagggaaggggccgccttt
gtgagttcccgtgttctcaagtgtttccctaattcatctgtcatcgaggaggatggtgaa
gggctcctgaaagctggttccattgcaggtactgctgtgttggaagtcacgtctgtagaa
ccttttggagtcaaccagacaaccataactggagtccaggtggcaccagtgacatacctg
cggatgagcagccaacccaagctgtacgccgcccgtgggagggctctgccggcatttcct
gtgggcatgtctctcacctttgttgtccagttctataacagcattggagagaaattccac
acacacaacacccagcttcatctggctctgaacagagatgacctgctacttattggacca
gggaataggaactatacttatgtggcccaggcagtgaacacaggagtgacgcttgtggga
atctgggaccggagacacccaggtgtggcagattacatcccagttgctgtggagcacgcc
atcatgccagacacccagctcacctttgttggagacgtcatctgcttcaggacacacctc
ctcaaccacaatggtgaacctgggatatggatgatttctgctgataacattctacaaaca
gacactgccactggagtgggagtggccaggagtccaggaatagcaacagtctttcatgac
atcccaggagtggtaaaaacgtatcgagaggtggtggtcaatgcatcatcaagattaacg
ctcagttatgacctcaagacctacctcaccaatacccccaattcaacggtgttcaagctc
ttcattaccactggcagaaatggtgctaatctcaaaggatcctgtaccccaagtcaggcc
ttggccatcacaacagtacttcttcctgagacccttgtgctgtgccatgtgcagttcagc
aatactatgctagacatcccagcaagcaaagtcttccatgtccacgcggggttcagcatg
gagagaggggtttatgtctgcctaatcagggttcgaccccagtctgaagagctgctccag
gccctcagcgtggctgacacctcagtctatgggtgggccacactggtcagtgagcggagc
aagaatggaatgcaaagaatccttattcctttcatcccagccttttacatcaaccagtca
gaattggttcttagccgcagacaagacgtcggggagatcagagtgctgggggtggacaga
gttcttgaagagctaaaggtcttccccagctccccagtcctagtggtctctggccacagg
cagtcttccctcacacctggcctggctgtctatcccgtaagggtaatcaacttcacctcc
cttcagcagacggcatctcctgttttcatcaatatttcctgtgagctcaccagtcaaagt
gaggctgtgctagtgagagctctgaagaaggctggtgcagatcaatgtgaagcctcaggt
atcttccagaagttcctgggttctcaccagaccatcctctttaccctctttgccatgctg
gcatcaacggctttcgtctttctagcatacaatgccttcttaaacaagatacagacggtt
ccagttgtttatgtaccaactctaggaacaccacaaccaggtaaaaaagaaccaccctca
cctatgaaaagatcaaattattcatactccatctgcttctcctttttactcctaggtcct
tatacctccaccacacgtcctcctccacctttcatgagtccacaaccccgaccaggccag
actcggctacaacactggctatggagtgtacggcactaa
DBGET
integrated database retrieval system
