Lutra lutra (Eurasian river otter): 125087332
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Entry
125087332 CDS
T08100
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
llv04040
]
125087332
Ion channels [BR:
llv04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
125087332
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
125087332
NCBI-ProteinID:
XP_047563496
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All DBs
Position
16:14805145..14847624
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AA seq
1834 aa
AA seq
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MASSSLPTLVPLGPESLRPFTRESLAAIERRALEEEARQERNKQMEIEEPERKPRSDLEA
GKNLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYMLSPFSVI
RRGAIKVLIHSLFSMFIMITILTNCVFMTMSNPPSWSKHVEYTFTGIYTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVITMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNTTWYGNDTW
YGNDAWYGNDTWYGNDTWNSYESSASNSTFDWDAYISDERNYYFLEGANDALLCGNSSDA
GHCPEGYECIKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIF
FVVIIFLGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKQQEELEKAK
AAQVLEGGEADGDPAHSKDCNGSLDTSLGEKGPPRQSCSADSGISDAMEELEEAHQKCPP
WWYKCAHKVLIWNCCTPWVKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHF
DNVLTVGNLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLS
VLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSY
KECVCKIASDCSLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVM
VIGNLVVLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIARIKWGIGFAKAFLLGLLHG
KILRPKDIMLSLGKPGEAGEAGEAGESAPEDEKKEPPPDEGDKDLKKDNHILNHMALVDG
SPPSIELDHLNFINNPYLTIHVPIASEESDLEMPTEEETDTFSEPEDSKKPAQPLDGNSS
VCSTADYKPPEEDPEEQAEENPDGEQPEECFTEACVQRCPVLYMDISQGRGKMWWALRRA
CFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILEMLLK
WVAYGFKVYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRF
EGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDISEV
NNKSDCESLMHTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQP
QYEVNIYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPQNKIQGMVYDCVTKQVFDITIMILICLNMVTMMVETDDQSQLKVD
ILYNINMVFIIIFTGECVLKMLALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVS
PTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSN
FAYVKKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGTS
VRGDCGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLSEDDFEMFYET
WEKFDPDATQFIEYSRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDILFAL
TKEVLGDSGEMDALKETMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQRAYRRHLL
QRTVKQASYMYRHSQDGGGDGGPEKEGLIATTMNRMYGQENGNSSVPGTGEDRGLTGDSG
PAIGLTAISPSDAALPPSLPLGQTVRPGVKESLV
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctcatctctgcccaccctggtgcctctgggccctgagagcctgcgccccttc
acccgggagtccctggcggccatagagcggcgggcgctggaggaagaggcccggcaggag
agaaacaagcagatggagatcgaggagccagaaagaaagccacgcagcgacctggaggct
ggcaagaacctgcccctcatctacggggaccccccacccgaggtcatcggcatccccctg
gaggacctggacccctactacagtgacaagaagaccttcatcgtccttaacaagggcaag
gccatcttccgcttctctgcgacgcctgccctctacatgctgagccccttcagtgtcatc
agacgcggcgccatcaaagtgctcatccactcgctgttcagcatgttcatcatgatcacc
atcctgaccaactgcgtgttcatgaccatgagcaacccgccttcctggtccaagcacgtg
gagtacacgttcacggggatctatacctttgagtccctcatcaagatgctggcccggggc
ttctgcattgacgacttcacattcctccgggacccctggaactggctggacttcagcgtc
atcaccatggcgtacctgacggagtttgtggacttgggcaacatctcagccctgagaacc
ttccgggtgctgcgggccctgaaaaccatcacagtcatcccagggctgaagacgattgtg
ggggccctgatccagtcggtgaaaaagctgtccgatgtgatgatcctcaccgtcttctgc
ctgagcgtctttgctctggtggggctgcagctcttcatgggaaacctacggcagaagtgc
gtgcgctggcccccgcccttcaatgacacgaacaccacgtggtacggcaatgacacgtgg
tacggcaatgacgcttggtacggcaacgacacgtggtatggcaacgacacgtggaacagc
tatgagagctcggccagcaactcgacctttgactgggatgcctacatcagtgacgaaagg
aactactatttcttggagggtgccaatgacgccctgctctgtgggaacagcagcgatgct
gggcactgccccgagggttatgagtgtatcaaggctgggcggaaccccaactacggctac
accagctacgacacgttcagctgggccttcctggctctcttccgcctcatgacccaggac
tactgggagaatctcttccagctgacccttcgagcagctggcaagacctacatgatcttc
tttgtggtcatcattttcttgggctccttctacctcattaacctgatcctggcagtggta
gccatggcgtacgcagagcagaatgaggccaccctggccgaggatcaggagaaagaggaa
gagtttcagcagatgttggagaaattcaaaaagcagcaggaggagctggagaaggccaag
gccgcccaggttctggaaggcggggaggccgatggggacccagcccacagcaaagactgc
aacggcagcctagacacctcgctcggggagaagggccccccacggcagagctgcagtgca
gacagtggtatctcagacgctatggaagagctggaagaggcccaccagaagtgccccccg
tggtggtacaagtgtgcccacaaagtcctcatatggaactgctgcaccccatgggtgaag
ttcaagaacatcatccacctgattgtcatggaccccttcgtggacctgggcatcaccatc
tgcattgtgctcaacaccctcttcatggccatggagcattaccccatgacagagcacttc
gacaacgtgcttaccgtgggcaacctggtcttcactggcatcttcacagcagagatggtg
ctgaagctcatcgccatggacccctatgagtacttccagcagggctggaacatcttcgac
agtatcatcgtcaccctcagcctggtggaactgggcctggccaatgtgcaagggctgtcc
gtgctccgctccttccgactgctgcgggtcttcaagctggccaagtcgtggccgacgctg
aacatgctcatcaagatcatcggcaactcggtgggcgcgctgggcaacctgacgctggtg
ctggccatcatcgtgttcatcttcgccgtggtgggcatgcagctgttcggcaagagctac
aaggagtgcgtatgcaagatcgcctccgactgcagcctgccccgctggcacatgcacgac
ttcttccactccttcctcatcgtcttccgcatcctgtgcggggaatggatcgagaccatg
tgggactgcatggaggtggccggccaggccatgtgcctcacggtcttcctcatggtcatg
gtcattggcaacctagtggtcctgaacctcttcttggccctgctgctgagctccttcagc
gctgacagcctggctgcctccgacgaggatggcgaaatgaacaacctgcagatcgccatt
gcgcgcatcaagtggggcatcggctttgccaaagcctttctcctgggactgctgcatggc
aagatcctgcgccccaaggacatcatgctcagcctcgggaagcctggggaggctggggag
gctggggaggccggggagagtgccccagaggacgagaagaaggagccaccacccgatgag
ggtgacaaggacctgaagaaggacaatcacattttgaaccacatggccctggttgacggt
tctccccccagcatcgagctggaccacctcaacttcatcaacaatccctacctgaccatt
cacgtacccatcgcctccgaggagtccgacctggagatgcccacggaggaggagactgac
acattctcagagcctgaggatagcaagaagccagcgcagcccctagatgggaactcctcc
gtctgcagcaccgccgactataagccccctgaggaggaccccgaggagcaggctgaagag
aaccccgatggggaacagcccgaggaatgcttcacggaggcctgcgtgcaacgctgccct
gtcctctacatggacatttcccagggccgtgggaagatgtggtgggcgctccgcagggcc
tgcttcaagattgtcgagcacaactggtttgagaccttcatcgtcttcatgatcctgctc
agcagcggagccttggcctttgaggacatctacattgagcagcggcgagtcatccgcacc
atcctggagtacgcggacaaggtgttcacctacatcttcatcctggagatgctgctcaag
tgggtggcctacggcttcaaggtgtacttcaccaatgcctggtgctggctggacttcctc
attgtcgatgtctccatcatcagtctggtggccaactggctgggctactcggagctggga
cccatcaaatccctgcggaccctgcgggctctgcgtcccctgagggccctgtcccgattt
gagggcatgagggtggtggtgaacgccctcttgggagccatcccctccatcatgaacgtg
ctgcttgtctgcctcatcttctggctcatcttcagcatcatgggcgtcaacctgtttgcc
ggcaagttctactactgcatcaacaccaccacctctgagaggtttgacatctctgaggtc
aacaacaaatcggactgtgagagccttatgcacacaggccaggtccgctggctcaacgtc
aaggtcaactatgacaatgtgggtctaggctacctctccctcttgcaggtggccaccttc
aagggctggatggacatcatgtatgcggcagtggactcccgggagaaggaagaacagccc
cagtacgaggtgaacatctacatgtacctctattttgtcatcttcatcatctttgggtcc
ttcttcaccctcaacctcttcatcggtgtcatcattgacaacttcaaccagcagaagaag
aagtttggagggaaagacatctttatgacggaggaacagaagaaatactacaatgccatg
aagaagcttggctccaagaagcctcagaagccaattccccggccccagaacaagatccag
ggcatggtgtatgactgcgtgaccaagcaggtgttcgacatcacgatcatgatcctgatc
tgcctcaacatggtcaccatgatggtggagacggacgaccagagccagctcaaggtggac
atcctgtacaacatcaacatggtcttcatcatcatcttcaccggcgagtgcgtgctcaag
atgctcgccctgcgccagtactacttcactgtgggctggaacatcttcgacttcgtggtt
gtcatcctgtccatcgtgggccttgcgctctccgatctgatccagaaatacttcgtgtca
cccacactgttccgagtgatccgcctggcccggatcggacgtgtcctgcggctgatccgg
ggggccaagggcatccggactctgctctttgccctcatgatgtccttgcctgccctcttc
aacattggcctcctcctcttcctcgtaatgtttatctactccatcttcggcatgtccaac
tttgcctatgtcaagaaggagtcgggcattgacgacatgttcaactttgagacctttggc
aacagcatcatctgtctctttgagatcactacatcagctggctgggatgggctcctgaac
cccatcctcaacagtgggccccctgactgtgacccaacactcgagaacccgggcaccagc
gtcaggggtgactgtggcaacccttccattggcatctgcttcttctgcagctacatcatc
atctctttcctcatcgtggtcaacatgtacattgccatcatcctggagaacttcaacgtg
gccaccgaggagagcagcgagcccctcagcgaggacgacttcgagatgttctatgagaca
tgggagaagtttgaccccgatgccacgcagttcatcgagtacagccgcctctcagacttt
gtggacaccctgcaggagccgctgaggatcgccaagcccaacaagatcaagctcatcacg
ctggaccttcccatggtgccaggggacaaaatccactgcctggacatcctctttgccctc
accaaggaggtcctaggcgactctggggaaatggacgctctcaaggagaccatggaggag
aagttcatggccgccaacccctccaaggtctcctatgagcccatcaccaccaccctcaag
aggaagcacgaggaggtgtgcgccatcaagatccagagggcctaccgccggcacctgctc
cagcgcacggtgaagcaggcatcctacatgtaccgccacagccaggacggcggcggggac
ggtggccccgagaaggagggcctgattgccaccaccatgaacaggatgtatggccaagag
aatgggaacagcagcgtgccgggcacgggtgaggacaggggcttgacgggggactctgga
ccggccatcgggctcacagccatcagcccctcagatgctgccctccctccctccctgccc
ctggggcagacagtgcgcccgggggtcaaagagtctctcgtctaa
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