Lutra lutra (Eurasian river otter): 125087375
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Entry
125087375 CDS
T08100
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1-like isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125087375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125087375
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
llv04054
]
125087375
Membrane trafficking [BR:
llv04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
125087375
Pattern recognition receptors [BR:
llv04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125087375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
PYRIN
NOD2_WH
LRR_6
AAA_16
NPHP3_N
LRR_1
LRR_4
NB-ARC
AAA_22
AAA_30
AAA_14
nSTAND_NTPase4
Motif
Other DBs
NCBI-GeneID:
125087375
NCBI-ProteinID:
XP_047563582
LinkDB
All DBs
Position
16:complement(60073285..60107047)
Genome browser
AA seq
1358 aa
AA seq
DB search
MASGVEWRLARYLDVLEKEELKEFQLRLPEKPLGGPPLHLTPACGQQPGGLEVASQLVAQ
YGEQQAWDLALHTWEQMGLSQLCAQARGEAALMPAEYSWLPCSPSAPSMQSPSGPTSTKV
LSFVQDPPTGSWRQLRGKFRRSLQNQGLILPFYQPLSSSPDQKSPLQESPSAPTSTAVLE
DWVPPSWSSHKPRKQEAPRAEWPLIETSGEHSRGIGERRQHQERKRPCPTKSWRNEDLQE
EFVELLLLHQSHRRLQESQSKGSWHHSRVEKQGQLIKVKDLFGLGLGAQEEGQTVVLHGV
AGVGKSVVARQVRRAWEEGRLYRNRFQHVFYFSCRQLAQSKTMSLKELITKDWAAPTAPS
EQILSQPGQLLLILDGLDELKWVLGKEKSEVCPYWDQPQLVKTLLGGLLRKTILPGVSLL
ITARTTALHLFILSVEQPQWVKVLGFSESGRKEYFYKYFKSESKAYRAFCAVELNQPLLT
MCLVPLVSWLVCTCMKKKLEQGESLWLPSQTTTALCLHYLAQALPAQPLGTQLRGLCSLA
AKGIRQGESLLIWEDLRKHELEEATVSALLEMGILRKHPSSPDYDFAHQYLQEFFAAVSC
VLESEDKECHPPDSIRGLEDLLKAYGGLAPFGVPTTCFILGLLSEQVQREMEAIFQGKVP
VERKRRLLCWAEEAVRNQLPILQQGSLPMLHCLYETQDKDFLTRVMAPFHGASVRIHTCL
ELLVFMFCIKFCAVKELRLKEHGQHGHTGSSLHVALLSGVLVTDVCWEVLFFTLQTTGNL
KELDLSGNCLSNTTVWSLCEALRFPCCHLETLRLVGCGLTSSCCRALASVLSTSPSLTEL
DLQQNELEDAGVRLLCEGLRHPTCQLRLLWLDQTQLSEEVTWMLRALEDEKPRLLIRSRR
KPSETMPNEGPREGETSGTSSLQQDRRESEGLSPQVAQEGLASLPSPALPENLHRGPLGT
EDDFWGPLGPVAIEVVDKDRSLHRVHLPMAGSYRWPSTGLRFVVREPANIDIEFCASDKF
LHETAWEQSWMVAGPLFDIKVKPGAVATMYLPHFMDLRGGCVDTSLFQVAHFKEPGMLLE
KPTRVELYHVVLEDPSFSPIGVFLRTIHAALRFLPVTSMVLLYHHTRLDETVFHLYLIPS
DCCVRKAIDDEEKAFQFVQIRKPPPLASLYLGSRYAVSSSEMLEAIPKELELCYRSPGQP
QLYSEFYVGDLGSGLRLQLKEESGAVVWEALVKPGDLQLASSLVPPAPAASPAPPSAPAS
LHFLDRHREQLVARVTTVDPVLDKLLGQVLSEEQYDRVRTKATAANQMRELFRFSRSWDL
ACKDQVYQALKETHPYLIMELWETWGGDRERGTSPLAQ
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggccagcggagtcgagtggcggctggcccggtacctggatgtgttggaaaaggaggag
ctgaaggagttccagcttcggctgcctgagaagcccctcggcgggcccccactccacctc
accccggcttgtgggcagcagccaggaggcctggaggtggcctcacagctggtggctcag
tacggggagcagcaggcctgggacctggccctccacacctgggagcagatgggcctgagc
cagctctgcgcccaggcccggggagaggcggccttgatgccagctgagtattcctggttg
ccctgctccccgagcgcacccagcatgcagtcacccagcgggcccacctccaccaaggtg
ctgtcatttgtccaggacccaccgactgggagttggagacagctgcggggcaaattcaga
cgcagccttcagaaccaaggccttatcttgcccttttaccaaccgctttcaagctcccca
gaccaaaagtcgccactccaggagtcaccaagtgctcccacatccacggcagtcctggag
gactgggtgcccccatcatggtccagccacaagcccagaaagcaggaggctcccagagct
gagtggcccctgattgaaacatctggagagcacagcagaggaatcggagaaagacgccag
caccaggagagaaagaggccctgccccacaaagtcatggagaaacgaggatttacaagaa
gaattcgtagagctgctgcttctccatcaatctcaccgcagactccaggagtcccagagc
aaggggagctggcatcacagcagggtggagaagcaaggtcagttgatcaaggtcaaagac
ttatttggcctgggcctgggtgctcaggaagaaggtcaaacagttgtactgcacggagtt
gctggagtcgggaagtcggtggtggccaggcaggtgaggagggcctgggaggaaggcagg
ctctacaggaaccgtttccaacacgtcttctacttcagctgcagacagctggcccagtcc
aagacgatgagtctcaaggagctcatcacaaaggactgggctgcccccacggctcccagt
gagcagatcctgtctcagcccggacagctgctgctcatcctcgatggtttggatgagcta
aaatgggtcttggggaaggagaagtcagaggtatgtccatactgggaccaaccacagctg
gtaaagacacttctgggtgggttgctgaggaaaaccatcctccctggggtatctctgctg
atcacagcacggaccacggctctgcatctgttcattctctctgtcgagcagccacagtgg
gtgaaggtcctggggttctccgagtccggccggaaggaatatttctacaaatatttcaag
agtgaaagcaaagcatacagagccttttgcgcggttgagttaaaccaaccactgttgacg
atgtgtctcgtgcccttggtgtcctggctggtctgcacttgcatgaagaagaagttggag
cagggagagtcactctggcttccctcccagaccaccactgccctctgtctgcactacctt
gcccaggctctgccggcccagccccttgggactcagctgaggggcctctgctctctggct
gccaagggcatcaggcagggagagagcttgctcatttgggaggatctcaggaagcatgag
ctagaggaggccactgtctctgccctcttagagatgggcattcttcggaagcatccctcc
tccccagactacgactttgctcaccagtacctccaagagttctttgcagccgtgtcctgc
gtgctggagagtgaggacaaggagtgccatccccccgacagtatccgagggctggaagac
ctgctaaaggcgtatgggggccttgccccatttggggtgccaaccacatgtttcatcctg
ggacttctgagcgagcaggtgcagcgggagatggaggccatcttccagggcaaggtgcct
gtggagaggaaacggagactgttgtgctgggccgaggaggcagtcaggaaccagctcccc
attctgcagcagggctccctgccgatgctgcactgtttgtacgagactcaggacaaggac
ttcctgacacgcgtgatggcccccttccacggggcgagcgtgcgcatccacacctgcctg
gagctcctggtgttcatgttctgcattaaattctgcgctgtgaaggagcttcgactgaaa
gagcatggacagcatggacacacggggagctccctccatgtggctctgctcagcggggtc
ctggtcacagatgtctgctgggaggttctatttttcactctccagaccactggaaacctg
aaggagctggacctaagtggaaactgcctgagcaacactacagtatggagtctctgcgag
gccctgaggttcccttgctgccatctggaaaccctgcggctggtcggctgcggcctcacg
tccagctgctgcagggccctggcctccgtgctcagcaccagccccagcctgacggagctg
gacctgcagcagaacgagctggaggacgccggcgtgcggttgctctgcgaaggcctcagg
catccgacctgccagctcaggctcctgtggctggaccagacccagctgagtgaggaggtg
acctggatgctccgagccctggaggacgagaagccgcggctgctcatccgcagcagacgg
aagccgagtgagacgatgcctaacgagggcccacgagagggagaaacgagcggcacgtcc
tcactccagcaggacagacgagagtcagagggactctcccctcaagtcgcccaggaggga
ctcgccagtctgccttctcctgcccttccagagaacctgcacagggggcctctggggact
gaggatgacttctggggtcccctggggcctgtggccattgaggtggttgacaaagacaga
agcctgcaccgagttcacttgcccatggctggctcctaccgctggcccagcacaggtctc
cgtttcgtggtgagagagcccgcgaacatcgacattgaattctgtgcctcagacaagttc
ctgcatgagacggcctgggaacagagctggatggtggccgggcctctgtttgacatcaag
gtcaagccaggggccgtggcgactatgtacctcccccacttcatggacctccgagggggc
tgcgtggacacctccctgttccaggtggcccactttaaagagccggggatgctgctggag
aagcccaccagggtggagctgtaccacgtggtcctggaggaccccagcttctcgcccata
ggagtgtttctgcggaccatccatgctgccctgcgtttccttcccgtcacctccatggtg
ctgctctaccaccacacgcgcctggacgagacggtcttccacctctacctgatccccagc
gactgctgtgttcggaaggccatcgatgacgaagagaaggcgttccagttcgtgcagatc
cgcaagccgcctccactggcctcgctctacctgggctcccgctacgctgtgtccagctcg
gagatgctagaagcaatccccaaggagctggagctctgctaccgcagccccggacaaccc
cagctctactctgagttctacgttggagacttggggtcgggtctcaggctgcagctgaaa
gaggaaagtggcgctgtggtgtgggaagccttggtgaaaccaggggacctccagctcgcg
tcttctctggtccccccagcccccgcagcctcgcccgcgccccccagcgccccagcctcg
ctgcactttctggaccggcatcgggagcagctggtggctcgagtgacaactgtggacccc
gtgcttgacaagctgctggggcaggtgctgagtgaggaacagtacgatcgggtacgcacc
aaggccacggccgccaaccagatgcgggagctgttcaggttcagcaggtcctgggacctg
gcctgcaaggatcaggtctaccaagctctgaaggagacccacccttacctcatcatggag
ctctgggagacatggggtggtgacagagagcggggcacctcccccctggcccagtag
DBGET
integrated database retrieval system
