Lutra lutra (Eurasian river otter): 125088033
Help
Entry
125088033 CDS
T08100
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37 isoform X1
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125088033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125088033
Enzymes [BR:
llv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125088033
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125088033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
HlyD_2
zf-C3HC4_2
MRFAP1
PIN_8
BORCS6
Motif
Other DBs
NCBI-GeneID:
125088033
NCBI-ProteinID:
XP_047564900
LinkDB
All DBs
Position
16:complement(33393904..33544386)
Genome browser
AA seq
991 aa
AA seq
DB search
MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR
EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP
LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII
REFASDFEVGECWGYNRFFRLDLLANEGYLNRQNDTVILRFQVRSPTFFQKCRDQHWYIT
QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDTPETRAKKSVSCTD
MLLQDGPTTASVREVKEDEEEEEKIQNEDYHHELSDGDLDLDLIGEDEVNHLDGSSSSAS
STATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPPGSNHGYVGASSRMSR
RAHLCSAATSSLLDIDPLILIHLLDLKDRSSMENLWGLQPRPPASLLQPTASYSRKDKDQ
RKQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKGSNAASGDMQASLFSADQA
ALAACGTENSGRLQDLGMELLAKSSVAGCYIRNSTNKKSNSPKPARSSIAGSLSLRRAID
SGENSRSKGDCQTLSEESLFFSVGSPGSSQSGSRHSSPRALTQSTISDILPKSEDRQCQA
LDSDAVVVAVFNGLPAVEKRRKMVTLGLFSPLRANAKGGRLEGMQMTALENNSETGELQP
VLPEGASAAPEEGMSSDSDIECDTENEEQEEHASMGGFDDSYMAQPPDEGAVPGVLLQRL
IKDTHSSFPDGEQIGPEDLSFNTDGSGGSPK
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacagagcgtggagagcattgctgaagttttccgatgcttcatttgtatggag
aagttgcgggatgcacgcctatgtcctcattgctctaagctttgttgtttcagctgtatc
aggcgctggctgacagaacagagagctcaatgccctcattgccgtgctccactccagctg
cgagaactagtaaactgtcgttgggcagaagaagtaacacagcagcttgatactcttcaa
ctctgtagtcttaccaaacatgaagaaaatgaaaaggacaaatgtgaaaatcaccatgaa
aaacttagtgtattttgctggacttgtaagaagtgtatctgccatcagtgtgcactttgg
ggaggaatgcatggtggacatacctttaaacctttggcagaaatttatgagcagcatgtt
actaaagtgaatgaagaggtagctaaacttcgtcggcgtctcatggaactcatcagcctt
gttcaagaagtggaaagaaatgtggaagctgttcgaaatgcaaaagatgagcgtgttcgg
gaaattaggaatgcagtggaaatgatgattgcacggttagacacacagctgaagaataaa
ctcataacactaatgggtcagaagacatctctaacacaggaaacagagctcttggaatcc
ttacttcaggaggtagagcaccagttgcggtcttgtagtaagagtgagttgatatctaag
agctcagagatcctcatgatgtttcagcaagttcatcgaaagcccatggcatcctttgtt
accactcctgttccaccagactttaccagtgaattagtaccatcttacgattcagcaact
tttgttttagagaatttcagcactttgcgtcagagagcagaccctgtttacagtccacct
cttcaagtttcaggactttgttggaggttaaaagtttacccagatggaaatggagttgtt
cgtggttactacttatctgtgtttctggaactgtcagctggcttacctgaaacttccaaa
tatgaatatcgtgtagagatggttcatcagtcctgcaatgatcctaccaaaaatatcatt
cgagaatttgcatctgactttgaagttggagagtgctggggttataatagatttttccgt
ttagatttacttgcaaatgaaggatacttgaatcgacaaaatgatacagtgattttaagg
tttcaggttcgttcaccaactttctttcaaaaatgccgggaccagcattggtatattact
cagttggaagctgcacaaactagctacatccaacaaataaataaccttaaagagagactt
actattgagttgtctcgaactcagaaatcaagagatttgtcaccgccagataatcatctt
agcccccaaaatgatgatactcctgagacacgtgctaagaagtctgtgtcatgcactgat
atgcttctccaggatggtcctactacagcttctgtaagagaggtcaaagaggatgaagaa
gaggaagagaagattcagaatgaagattatcatcatgaactctctgatggagatctggat
ctggatcttattggggaagacgaagtgaatcaccttgatggcagcagttcctccgccagt
tccacagcaacaagtaacacagaagaaaatgacattgatgaagaaactatgtctggagaa
aatgatgtggaatacaacaacatggagttagaagagggagaacttatggaagatgcagct
gctgcaggaccaccaggtagtaaccatggctacgtgggtgccagcagcagaatgtcaaga
agagcacatttatgctctgctgctaccagtagtttattagacattgatccattaatttta
atacatttgttggaccttaaggaccggagtagtatggaaaatttgtggggcttacagcct
cgcccacctgcttcacttttgcagcccacagcctcatattctcgaaaagataaagaccaa
aggaagcagcaggcaatgtggagagttccctctgatttaaagatgctaaaaagactcaaa
actcagatggctgaagttcgatgtatgaaaactgatgtaaagaatacgctttcagaaata
aaaggtagcaatgctgcttctggagacatgcaggcaagccttttttctgctgaccaggca
gctctggctgcttgtggaactgaaaattctggcagattacaggatttgggaatggagctc
ttggcaaagtcatcagttgctggttgttacatacgaaactccacaaataagaagagtaat
tcacccaagccagctcggtccagtatagcaggtagtctgtcacttagaagagcaatagac
tctggggaaaatagccgttcaaagggagactgtcaaactctatccgaagaatcccttttc
ttttctgtaggctccccaggaagctctcagtctgggagcaggcacagttctccccgagcc
ttaacacagagcaccatcagtgatattttgccgaaatctgaagaccggcagtgtcaagct
ttggattcggatgctgttgtggttgcagttttcaatggtttacctgctgttgagaagagg
aggaaaatggtcaccttggggttgttttctcccttgagggctaatgctaaaggaggtcgt
ctggaaggaatgcaaatgactgctttggaaaataattctgaaactggggaattacaacct
gtactacctgaaggagcttcagctgcgcctgaggaagggatgagtagtgacagcgatatt
gaatgtgacactgagaacgaggagcaggaagagcacgccagcatgggagggttcgacgac
tcttacatggcgcagcccccagatgaaggtgcagtacctggtgtccttttacagagatta
ataaaagatacgcattccagttttcctgatggtgaacaaataggccctgaagacctcagc
tttaatactgacggaagcggcggaagcccaaaataa
DBGET
integrated database retrieval system
