Lutra lutra (Eurasian river otter): 125089231
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Entry
125089231 CDS
T08100
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2-like isoform X1
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04621
NOD-like receptor signaling pathway
llv04668
TNF signaling pathway
llv05152
Tuberculosis
llv05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
125089231
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125089231
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
125089231
09163 Immune disease
05321 Inflammatory bowel disease
125089231
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
llv04054
]
125089231
Pattern recognition receptors [BR:
llv04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125089231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
CARD
NLRC4_HD2
NOD2_WH
LRR_4
AAA_16
AAA_29
LRR_8
AAA_25
G-alpha
NB-ARC
AAA_22
AAA_30
ABC_tran
Sigma54_activat
nSTAND3
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
125089231
NCBI-ProteinID:
XP_047567261
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All DBs
Position
17:complement(32525156..32562708)
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AA seq
1013 aa
AA seq
DB search
MCTQEAFQAQRSQLVGLIVSGSLEGFESILDWLLSWEVLSWEDYEGLSLLGQPLSHLARR
LLDTVWNKGTWGCEQLIAAVREAQTDYQARELSSCWDPHSPHPARDLQSHRPAIVRRLHS
HVEGVLDLAWEHGFISQYECDEIRLPIFTSSQRARRLLDLATVKANGLAAFLLRHVQKLP
VSLALPFEDAACKKYMSKLRTTISSQSRFLSTYDRAENLCLEEIYTENVLEVRTERGLAG
LPQKSPVTLGLEELFGTRGHLNEDADTVLVVGEAGSGKSTLLQQMHLLWASGRDFQEFLF
VFPFSCRQLQCVAKPLSVQTLLFEHCCWPDLGQQEVFQFLLDHPNRVLLTFDGFDEFKFR
FSDCERHCSPTDPTSVQNLLFNLLQGNLLKNARKVLTSRPDAVSALLRKYLRLELHLKGF
SEEGIELYLRKCHREPGVADRLVRLLKATSPLHGLCHLPVVSWMVSKCHQELLLHGGGSP
KTTTDLYLLILQHFLLHASPPDSVPCGLAPGLLQGRLPSLLHLGRLAVWGLGTCCYVFSD
KQLQAAHIDSEDISLGFLVHAKSVVQGGTAPLEFLHITFQCFFAALYLVLSADLSPSLLR
QLFSCHGPRSSLLARLLPPMCVPRSEHQEGSMAALLQEAEPHNLQITAAFLAGLLSREHQ
GLLAGSQVSKKALLQRQACARSCLSCSLRKHFHSIPPAVPGEAKSMHAMPGFIWLIRSLY
EMQEERLAREAVRGLKVGHLKLTFCGLGPAECAALAFVLRHLQRPVALQLDHNSVGDVGV
EQLLPCLNVCKALYLRDNNISDRGICKLVERALHCEQLQKLALFNNKLTDGCAPSMARLL
SCKRNFLALRLGNNHITATGAQVLAEGLRANASLQFLGLWGNKVGDEGAQALAEALGDHQ
SLRWLSLVGNNIGSTGAQALALMLEKNVVLEELCLEENCLQDEGVCSLAEGLERNSSLKV
LKLSDNRITYFGAEALLRALERNDTILEVWLRGNSFSAEEVERLGQRDTRFLL
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtgtacccaggaggctttccaggctcagaggagccagctggtggggttaattgtctcg
gggtccctggagggcttcgagagcatcctggactggctgctttcctgggaagtcctctcc
tgggaagactatgagggcctcagcctcctgggccagccgctctcacacttggccaggcgc
ctcctggacactgtctggaacaagggcacttggggctgtgaacagctcatcgcggccgtc
cgggaggcccagaccgactaccaggctcgggagctgtccagctgctgggacccccactcg
ccccacccagcccgggacctgcagagtcaccggccagccatcgtcaggaggctccacagc
cacgtggagggcgtgctggatctagcctgggagcacggtttcatcagccagtatgaatgt
gatgaaatccggttgcccatcttcacgtcctcccagcgggcaaggaggctcctcgatctt
gccacagtgaaggcgaatgggttggctgccttccttctacgtcatgttcagaaattgcca
gtctcgttggccctgccttttgaagatgctgcatgtaagaaatatatgtccaagctaagg
accacgatatcttctcagtctcgctttctgagcacctacgatagggcagagaatctttgc
ctggaggaaatatacacagagaatgttctggaagtccggacagaacggggcctggccgga
ctcccacagaagagccctgtgacgctgggcctggaggagctctttggcacccgtggccac
ctcaatgaagatgcagacactgtgctggtggtgggcgaggcgggcagcggcaagagcaca
ctgctacagcagatgcacctgttgtgggcctcagggcgtgacttccaggaatttctcttc
gtcttcccattcagctgccgacagctgcagtgtgtggccaagccgctgtctgtgcagacg
ctgctttttgagcactgctgttggcctgaccttggccaacaggaggtcttccagttcctc
cttgaccaccccaaccgtgtcctcttaactttcgatggctttgatgagttcaagttcagg
ttctcggattgtgagcgtcactgctctccgaccgaccccacctctgtccagaatctgctg
ttcaaccttctgcagggcaacttgctcaagaacgcgcgcaaggtgctgaccagccgtccg
gatgcggtgtccgcactgctcaggaagtacctgcgtttggaactccacctcaagggcttc
tcggaagagggcatcgagctgtacctgaggaagtgccaccgtgagccgggggtggccgac
cgcctcgtccgcctgctcaaagcaacctcacccctgcatgggttgtgccaccttcctgtt
gtctcgtggatggtgtccaaatgccaccaggaactgttgttgcatggtggcgggtcccca
aagaccaccacggatctgtacctgctgatcctgcagcattttctgctgcatgcctcccca
ccagactcggtgccctgcggtctggcacccggcctgcttcaaggcaggctcccctccctc
ctacacctgggccggctggctgtctggggcctgggcacatgctgctacgtgttctcagac
aagcagctccaggcagcgcacatcgacagcgaggacatttctcttggcttcctggtgcat
gccaagagtgttgtgcaggggggcacagcccccctggaattcctgcacatcaccttccag
tgtttttttgcagccttgtaccttgtgcttagtgctgacttgtcgccgtccttgctcaga
caactcttcagttgtcacgggccacgcagctcgctgctggcccggctgctgccccccatg
tgtgtgccacgctcagagcaccaggagggcagcatggccgctttgctgcaagaggctgag
ccccacaacctccagatcacagcagccttcctggcggggctgctgtcccgggagcaccag
ggcctgctggctgggagccaggtgtccaagaaggccctgctccagcgtcaggcctgtgcc
cgcagctgtctgtcctgcagcctccgcaagcacttccactccatccctccggccgtgccg
ggggaggccaagagcatgcacgccatgcctggcttcatctggctcatccggagcctgtac
gagatgcaggaggaacggctggcccgggaggccgtgcgggggctcaaggtcgggcacctg
aagctgacgttttgcggcctgggccccgcagagtgtgctgccctggcgtttgtgctgcgg
caccttcagcgtcccgtggccctgcagctggaccacaactctgtaggggatgttggtgtg
gagcagctgctgccttgcctcaacgtctgcaaggctctatacttgcgggataacaacatc
tcagaccgaggcatctgcaagctcgtggagcgtgccctgcactgtgagcagctgcagaag
ttagcactcttcaacaacaaactgaccgatggctgtgcaccctccatggccaggcttctc
tcgtgcaagcggaacttcctggcgttaaggctggggaataaccacatcactgccacagga
gcccaggtgctggccgaggggctcagagccaacgcctccttgcagttcttggggttgtgg
ggcaacaaggtgggtgatgagggggcccaggccttggctgaagccttgggggatcaccag
agcttgaggtggctcagcctagtgggcaacaacattggcagcacaggggctcaagcctta
gcgttaatgttggaaaagaacgtggtgctggaagaactctgcctggaggagaactgtctc
caggatgaaggtgtgtgttctcttgccgaaggacttgagaggaattcaagtttgaaagtt
ctgaagctgtctgacaaccgcatcacctactttggggcagaagccctcctgcgggccctg
gaaaggaatgacaccatcctagaagtctggctccgaggcaactcattctctgctgaggaa
gtggagaggctcggccagagagacaccagattcttgctctga
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integrated database retrieval system
