Lutra lutra (Eurasian river otter): 125091668
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Entry
125091668 CDS
T08100
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1F isoform X1
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04010
MAPK signaling pathway
llv04020
Calcium signaling pathway
llv04022
cGMP-PKG signaling pathway
llv04024
cAMP signaling pathway
llv04260
Cardiac muscle contraction
llv04261
Adrenergic signaling in cardiomyocytes
llv04270
Vascular smooth muscle contraction
llv04723
Retrograde endocannabinoid signaling
llv04725
Cholinergic synapse
llv04726
Serotonergic synapse
llv04727
GABAergic synapse
llv04911
Insulin secretion
llv04912
GnRH signaling pathway
llv04921
Oxytocin signaling pathway
llv04924
Renin secretion
llv04925
Aldosterone synthesis and secretion
llv04927
Cortisol synthesis and secretion
llv04929
GnRH secretion
llv04934
Cushing syndrome
llv04935
Growth hormone synthesis, secretion and action
llv05010
Alzheimer disease
llv05020
Prion disease
llv05022
Pathways of neurodegeneration - multiple diseases
llv05207
Chemical carcinogenesis - receptor activation
llv05410
Hypertrophic cardiomyopathy
llv05412
Arrhythmogenic right ventricular cardiomyopathy
llv05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125091668
04020 Calcium signaling pathway
125091668
04024 cAMP signaling pathway
125091668
04022 cGMP-PKG signaling pathway
125091668
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
125091668
04929 GnRH secretion
125091668
04912 GnRH signaling pathway
125091668
04921 Oxytocin signaling pathway
125091668
04935 Growth hormone synthesis, secretion and action
125091668
04924 Renin secretion
125091668
04925 Aldosterone synthesis and secretion
125091668
04927 Cortisol synthesis and secretion
125091668
09153 Circulatory system
04260 Cardiac muscle contraction
125091668
04261 Adrenergic signaling in cardiomyocytes
125091668
04270 Vascular smooth muscle contraction
125091668
09156 Nervous system
04727 GABAergic synapse
125091668
04725 Cholinergic synapse
125091668
04726 Serotonergic synapse
125091668
04723 Retrograde endocannabinoid signaling
125091668
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
125091668
09164 Neurodegenerative disease
05010 Alzheimer disease
125091668
05020 Prion disease
125091668
05022 Pathways of neurodegeneration - multiple diseases
125091668
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
125091668
05412 Arrhythmogenic right ventricular cardiomyopathy
125091668
05414 Dilated cardiomyopathy
125091668
09167 Endocrine and metabolic disease
04934 Cushing syndrome
125091668
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
llv04040
]
125091668
Ion channels [BR:
llv04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125091668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
HemY_N
Motif
Other DBs
NCBI-GeneID:
125091668
NCBI-ProteinID:
XP_047571384
LinkDB
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Position
X:56709623..56734232
Genome browser
AA seq
1984 aa
AA seq
DB search
MSASEGGKDTTPEPSPANGTGPGPEWGLCPGPPALGGEEISGAAGLETPKRRTQHSKHKT
VAVASAQRSPRALFCLTLANPLRRFCISIVEWKPFDILILLTIFANCVALGVYIPFPEDD
SNTANHNLEQVEYVFLVIFTVETVLKIVAYGLVLHPSAYIRNGWNLLDFIIVVVGLFSVL
LEQGPGRPGDTPHTGGKPGGFDVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKALVPLLH
IALLVLFVIIIYAIIGLELFLGRMHKTCYFLGSDVEAEEDPSPCASSGSGRACTLNQTEC
RGRWAGPNGGITNFDNFFFAMLTVFQCVTMEGWTDVLYWMQDAMGYELPWVYFVSLVIFG
SFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLRGYLDWITQAEDLDIEDP
SADGNFGSMAEEGRAGHRPQLAELTTRRRGRLRWFSHSTRSTHSTSSHASLPASDTGSMT
ETPGDEEEEEGALASCTRCLNKIMKTRVCRHLCRANRGLRARCRRAVKSTACYWAVLVLV
FLNTLTIASEHHGQPVWLTQIQEYANKVLLCLFTVEMLLKLYGLGPSAYVSSFFNRFDCF
VVCGGILETTLVEMGTMQPLGISVLRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASL
LLLLFLFIIIFSLLGMQLFGGKFNFDQTHTKRSTFDTFPQALLTVFQILTGEDWNAVMYD
GIMAYGGPFFPGMLVCVYFIILFICGNYILLNVFLAIAVDNLASGDTGTVNDKGREKSTE
GAPPQENGVLVPGGENEEEEGRKNEETGMEEEEEDEEDEEEEEEEEEGGAGRVELLQEVV
PKEKVVPIPEGSAFFCLSQTNPLRKACHTLIHHHIFTNLILVFIILSSVSLAAEDPIRAH
SFRNHILGYFDYAFTSIFTVEILLKMTVFGAFLHRGSFCRSWFNLLDLLVVSVSLISFGI
HSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACI
GVQLFKGKFYSCTDEAKHTPQECKGSFLVYPDGDVSRPLVRERLWVNSDFNFDNVLSAMM
ALFTVSTFEGWPALLYKAIDANAEDKGPIYNYHVEISVFFIVYIIIIAFFMMNIFVGFVI
ITFRAQGEQEYQNCELDKNQRQCVEYALKAQPLRRYIPKNPHQYRVWATVNSAAFEYLMF
LLILLNTVALAMQHYEQTAPFNYAMDILNMVFTGLFTVEMVLKIIAFKPKHYFTDAWNTF
DALIVVGSVVDIAVTEVNNGGHLGESSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLL
WTFIKSFQALPYVALLIAMIFFIYAVIGMQIFGKVALQDGTQINRNNNFQTFPQAVLLLF
RCATGEAWQEIMLASLPGSRCDPESDVSPGEEFTCGSNFAIAYFISFFMLCAFLIINLFV
AVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPGAKGRIKHLDVVALLRRIQPPLGFGK
LCPHRVACKRLVAMNMPLNSDGTVTFNATLFALVRTSLKIKTEGNLEQANQELRIVIKKI
WKRIKQKLLDEVIPPPDEEEVTVGKFYATFLIQDYFRKFRRRKEKGLLGSEAPSSTSSAL
QAGLRSLQDLGPEIRQALTCDTDEEEEGQEREEEEDEKDPEIYKAPMGSQPPSRRSSVIS
VSLPVGDRPPDSLSLGPSDDDGGPPNSRQPSGPQAGSHGHRRSSGGFIFTIPEEGSSQLK
GNEEQENSAKEEEVPTKDSGHDMLSYLNERAGTPPRPIILTPHRPQRYLDGHNAPRRRLL
PPTPAARKPSFTIQCLRRQGGCEDLPIPGTYHRGLPLNGRAQGSWATPPQRSRLLYAPLL
LVEEGAAGEGYLHKSSGPLRTFTCLPVPGTHSDSSHGKRGSADSLVEAVLISEGLGLFAR
DPRFVALAKQEIADACRLTLDEMDSAASDLLAQGTSSLYSDEESILSRFDEEDLGDEMAC
VHAL
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgtctgaaggcgggaaagacaccaccccagagcccagcccagccaatgggaca
ggacctggtcctgaatgggggctgtgccctgggcctccagcattggggggtgaagaaatc
agtggggcagcgggcctggagacccctaagcgaaggactcagcacagtaagcacaagacg
gtggcagtggccagtgctcagcggtcaccccgggctctcttctgcctcaccctggccaac
cccctgcggcggttctgcatcagcattgtggagtggaagccctttgacatcctcatcctg
ctgaccatctttgccaactgtgtagccctgggggtctacatcccctttccagaggatgac
tccaacactgccaaccacaacctggagcaagtggaatacgtattcctggtgattttcact
gtggagactgtgctcaagatcgtggcctacgggctggtgctccatcccagtgcctacatc
cgcaatggctggaacctactcgacttcatcatcgttgtggtcgggctgttcagcgtgcta
ctggagcagggccctggtcggccaggagacaccccgcacacagggggaaagccgggaggc
ttcgatgtgaaggcgttaagggcgtttcgggtgctgaggccactgaggctggtatctggg
gtgccaagcctgcacatagtgctcaattccatcatgaaggcgctggtgcccctgctgcac
atcgccctgctcgtgctcttcgtcatcatcatctatgccatcattggactcgagctgttc
cttggacgcatgcacaagacatgttacttcctgggatctgacgtggaagcggaggaggac
ccgtcaccctgcgcatcttcgggatccgggcgtgcgtgcaccctgaaccagaccgagtgc
cgcgggcgctgggcagggcccaacggaggcatcaccaacttcgacaacttcttcttcgcc
atgctgaccgtcttccagtgcgtcaccatggaaggctggacagacgtgctctactggatg
caggatgccatggggtatgagcttccctgggtatatttcgtgagtctcgtcatctttggg
tccttcttcgtcctcaaccttgtacttggtgtcctgagcggggagttctccaaggagagg
gagaaggccaaagcacgaggggacttccagaagctgcgggagaagcaacagttggaggag
gacctgcgaggctacctggactggatcacgcaggcagaggacctggacatcgaagacccc
tcagcagatggcaattttggttctatggctgaagagggccgggccggccaccggccacag
ctggcagagctgaccaccaggagacgtggacgtctgcgctggtttagtcactctacccgc
tctacccactccaccagcagccatgccagcctcccagccagtgacactggttcgatgaca
gagaccccaggcgatgaggaagaagaggagggggctctggccagttgcacacgctgccta
aacaagatcatgaaaactagggtctgccgccacctctgccgagctaaccggggccttcgg
gcacgctgccggcgggctgtgaagtccaccgcctgttactgggccgtgctggtgcttgtc
ttcctcaacacgctgaccatcgcctcagagcaccacgggcagcccgtttggctcacccag
atccaggagtatgccaacaaggtgttgctctgtctatttacggtggagatgcttctcaag
ttgtatggcctgggcccctctgcctatgtttcttccttcttcaaccgctttgactgcttc
gtggtctgtggaggcatcctggagaccaccctggtggagatgggcaccatgcaacccctg
ggcatctcagtgctccgatgtgtgcgcctcctcaggatctttaaagtcactaggcactgg
gcatctctgagcaatttggtggcatccctgctcaattcaatgaaatccattgcatcgttg
ctgcttctcctcttcctcttcatcatcatcttctccctgcttggcatgcagctctttggg
ggcaaattcaactttgaccagacccacaccaagcgaagcaccttcgataccttcccccag
gccctcctcactgtctttcagatcctgacaggtgaggactggaatgcggtcatgtatgat
ggtatcatggcctatggtgggcccttcttcccaggaatgctggtgtgtgtctattttatt
atcctcttcatctgcggcaactacatccttctgaacgtgtttcttgccattgctgtggat
aacctggccagcggagatacagggactgtcaatgacaagggcagggagaagagcactgag
ggggctcccccacaggaaaatggagtgttggtgcctggtggggagaatgaggaagaggag
ggcagaaagaatgaagaaacaggcatggaggaagaagaggaggacgaggaggatgaggag
gaagaggaagaagaggaggaaggaggtgcagggcgtgtggaactcctgcaggaagttgta
cccaaggagaaggtggtacccatccctgaaggcagtgccttcttctgtctcagccaaact
aacccgctgaggaaggcctgccacaccctcatccaccatcatatcttcaccaaccttatc
ctggtgttcatcatcctcagcagtgtgtccctggccgctgaggaccccatccgagcccac
tccttccgcaaccacattctggggtactttgattatgctttcacctccattttcaccgtg
gagattctactaaagatgacagtgtttggggccttcctgcaccgaggttccttctgccgt
agctggttcaatctgttggatctgctggtggtcagtgtgtccctcatctcctttggcatc
cactccagcgccatctcagtggtgaagatcctgagggtactccgagtactgaggcctctc
cgagccatcaacagggccaagggactcaagcacgtggtgcagtgtgtgttcgtggctatc
cgaaccatcgggaacatcatgattgtgactacgctcctgcaattcatgtttgcctgcatt
ggcgtgcagctcttcaaggggaaattctacagttgcactgatgaagccaaacacaccccc
caagagtgcaagggctccttcctggtctaccctgatggagatgtatcacgaccactggtc
cgggagcggctctgggtcaacagtgatttcaactttgacaatgtcctctcagccatgatg
gccttattcactgtctctacctttgaaggctggcctgctctactatacaaggccatcgat
gcaaatgcagaggacaagggtcctatctataattaccatgtggagatctcagtgttcttc
attgtctacatcatcatcattgcattcttcatgatgaacatctttgtgggctttgtcatc
atcaccttccgtgcccagggcgagcaggaataccaaaattgtgagctggacaagaaccag
cgccagtgcgtggagtatgccctcaaggcccagccactccgccgctacatccccaagaac
ccacatcagtatcgtgtgtgggccactgtgaactctgctgccttcgagtacctcatgttc
ctgctcatcctgctcaacacggttgctctagccatgcagcactatgaacagactgctcct
tttaactatgccatggacatcctcaacatggtcttcactggcctcttcactgttgagatg
gtgctcaaaatcatcgccttcaaacccaagcattattttaccgatgcctggaacacattt
gatgctcttattgtggtgggcagcgtagtggacattgccgtcactgaagtcaacaatggt
ggccaccttggcgagagctctgaggacagttcccgcatttctatcactttcttccgcctc
ttccgagtcatgcggctagtcaagcttctcagtaaaggtgaaggaatccgcacattgctc
tggacattcatcaagtccttccaggccttgccctatgtggctcttctcatcgcaatgata
ttcttcatttatgcagtcattgggatgcagatatttggcaaggtggctcttcaggatggc
acacagatcaaccgaaacaacaacttccagacctttccacaggctgtgctgcttttgttc
aggtgtgccactggtgaggcatggcaggagataatgcttgccagccttcccgggagtcgg
tgtgaccctgagtctgatgtcagccctggcgaggagtttacctgtggtagcaattttgcc
atcgcctattttattagcttcttcatgctctgcgccttcctgatcataaatctctttgtg
gctgtcatcatggataactttgattatctaaccagagactggtccatcttgggcccccat
caccttgatgaattcaagaggatctggtctgaatatgaccctggagccaagggccgcatc
aagcacctggatgtggttgctctgctgagacgcatccagccccccttgggatttgggaag
ctgtgcccacaccgagtggcctgcaagagacttgtggcgatgaacatgcccctcaactca
gatgggacagtgacattcaatgccacactctttgccctggttcggacatccttgaagatc
aagacagaagggaacctggaacaagccaatcaggagctgcggattgtcatcaaaaagatc
tggaagcggataaagcagaagctgctagatgaggtcatcccccctcctgacgaggaagag
gtcaccgtgggcaaattctacgccacatttctgatccaggactatttccgcaaattcagg
cggaggaaagaaaaggggctactagggagtgaggccccctcaagtacctcctctgccctt
caggctggtctgaggagcctacaggacttgggtcctgagatcaggcaggccctcacctgt
gacacagatgaggaggaagagggacaggagagagaggaggaggaagatgagaaggacccg
gaaatttataaagccccgatgggctcccagcccccatctcgccggagctccgtgatttct
gtgtctctacctgttggggacagacctccagattcactctcccttgggcccagtgatgac
gatggggggcctcccaattccagacagcccagtggaccccaggctggatcccatggccac
aggagaagctctggaggctttattttcaccattccagaagaaggaagttctcagctcaaa
ggaaatgaagaacaggagaatagtgccaaggaagaggaagtccccaccaaggactctggc
catgacatgctctcctacctaaacgaacgcgcagggactcctccacgccccatcattttg
acaccccacagaccccagagatacctggacgggcacaacgcaccacgccgccgtctgctg
ccccccacacctgcagctcggaagccttccttcactatccagtgtctgaggcgccagggt
ggttgtgaagatttacccatcccaggcacctatcatcgtgggctacccctcaacggcagg
gcacagggttcctgggcaacccctccacaacggagtcggctcctctatgccccactcttg
ttggtggaggagggcgcagcgggggagggatacctccacaaatccagtggtccgctgcgc
accttcacctgtctgcccgtgcctggaacccactcagactccagccatggcaagaggggc
agtgctgatagcctggtggaggctgtgctcatctccgagggcctgggcctcttcgcccga
gacccacgctttgtggccctggccaagcaggagattgcagatgcctgtcgcctgaccctg
gacgagatggacagtgctgccagtgacctgctggcacaggggaccagctcactgtatagt
gatgaggaatctatcctctctcgcttcgatgaggaggacctcggagacgaaatggcctgt
gtccatgccctctga
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integrated database retrieval system