Lutra lutra (Eurasian river otter): 125092140
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Entry
125092140 CDS
T08100
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04360
Axon guidance
llv04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
125092140
09158 Development and regeneration
04360 Axon guidance
125092140
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
llv01009
]
125092140
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
llv04040
]
125092140
Protein phosphatases and associated proteins [BR:
llv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125092140
Ion channels [BR:
llv04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125092140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
125092140
NCBI-ProteinID:
XP_047572449
LinkDB
All DBs
Position
X:34105752..34360323
Genome browser
AA seq
974 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRR
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHSRRSFSASSTELSQ
RDDTNDGSGGARAKSKSVSFNLGCKKKACHGPPLIRTMPRAGGAQGKSKAESSSKRSFMG
PSLKKLGLLFSKFNGHMSEPSSEPMYTISDGIAQQHYMWQDIRYSQMEKGKAGACSQSEI
NLSEVELGDARGAAESSECPLACSSSLHCASSICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDGQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccaactgtactacaaaaaagtcaactattcgccatacagagatcgtatccccctg
caaattgtgagggctgagaccgagctctctgcagaagagaaggctttcctcaatgctgtg
gagaagggggactatgccaccgtgaagcaggccctacaggaagctgagatttactacaat
gtcaacatcaactgcatggatcctctgggccggagtgccctgcttattgccattgagaat
gagaacttggaaattatggagcttctactgaaccacagcgtatatgtaggtgatgcattg
ctctacgccatccgcaaggaagtggtgggcgctgtggagcttctgctcagctaccggcgg
ccaagtggagagaagcaggtccccaccctgatgatggatacccagttctctgagttcaca
ccagacatcactcccatcatgctggctgcccacaccaacaactacgagatcatcaaattg
cttgtccaaaaacgagtcacaatcccacgaccccaccagatccgctgtaactgtgtggag
tgtgtgtccagttcagaggtggacagcctgcgccactcccgctcccggctgaacatctat
aaagctctagcaagcccctcactcattgccttgtcaagtgaggaccctatcctaactgcc
ttccgcctaggctgggagctcaaggagctcagcaaggtggagaatgaattcaaggccgag
tatgaggagctctcccaacagtgcaaactctttgccaaagacctgttggaccaagctcgg
agctcccgggagttggaaatcatcctcaaccatcgagatgaccacagtgaagagcttgac
cctcagaagtaccatgacctggccaagctgaaggtggcaatcaaataccaccagaaagag
tttgttgctcagcctaattgccaacagttacttgccaccctgtggtatgacggcttccct
ggatggcgacggaaacactgggtagtcaagctgcttacctgcatgaccattgggttcctg
tttcccatgctgtctatagcttacctgatctcacccagaagcaaccttgggctgttcatc
aagaaaccctttatcaagtttatctgccacacagcatcatatctgaccttcctcttcatg
cttctcctggcttctcagcacatcgttaggacagaccttcatgtacaggggcctccccca
actgtcgtggaatggatgatattgccttgggttctcggtttcatttggggagagattaaa
gaaatgtgggatggtggatttactgaatatatccatgactggtggaacctgatggatttt
gcaatgaactcactctacctggcaaccatttcactgaagattgtggcctatgtcaagtat
aatggttctcgtccaagggaagaatgggaaatgtggcacccgaccctgattgcagaagcg
ctctttgcaatatccaacattttaagttcgttgcgtctcatatccctgttcacagccaac
tcccacttaggacctctgcagatctctttggggcgcatgctgcttgatatcctcaaattc
ctctttatctactgtctagtactgctggcttttgccaatggattgaaccagctttacttt
tattatgagaccagagcaatcgatgagccaaacaactgcaagggaatccgatgtgagaaa
cagaataatgccttctccacgctcttcgaaaccctccagtcactcttctggtctgtcttt
ggccttttaaatctctatgtcaccaatgtaaaagccagacacgagttcacagagtttgtg
ggagctaccatgtttgggacatacaacgtcatctccctagttgtgctgctgaacatgttg
attgccatgatgaacaactcctaccagcttattgccgatcatgccgatattgagtggaag
tttgcaaggacaaagctctggatgagttactttgatgaaggtggcaccttgccacctcct
ttcaacatcatccccagtcccaagtcatttctctaccttggtaactggtttaacaacacc
ttctgccccaaaagagaccctgatggtagacggaggaggcacaacttgagaagcttcacg
gaacgccatgctgacagcctgatacagaatcaacattatcaggaagtcatcaggaatttg
gtcaaaagatatgtggctgctatgataagaaattccaaaacaaacgagggactaacagaa
gaaaattttaaggaattaaagcaggacatttccagctttcgatatgaagtacttgacctc
ttaggaaacaggaaacactcaaggagaagcttttccgcgagcagcactgaactctctcag
agggatgacaccaatgatggcagtggtggggctcgggccaaatccaagagtgtctctttc
aacttgggctgcaagaaaaaggcctgccacgggccacctctcatcagaaccatgccaaga
gccgggggtgcccaagggaagtcaaaagctgagtcatcaagtaaacggtccttcatgggt
ccttctctcaagaaactcggtctcttgttctccaaatttaatggtcatatgtctgaaccc
agttcagagccaatgtacaccatttcggatggcatcgctcagcagcactatatgtggcag
gacatcagatattctcagatggagaaagggaaagcaggggcctgttctcaaagtgaaatt
aacctcagtgaggtagaattaggtgacgcccggggtgctgctgagagcagtgaatgcccc
ctagcctgttctagctctctccactgtgcatccagcatctgctcctcaaattctaaactt
ttagactcctcagaggatgtatttgaaacttggggagaggcttgcgacctgctcatgcac
aaatggggtgatggacaggaagaacaagttacaacgcggctctaa
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