Lutra lutra (Eurasian river otter): 125095150
Help
Entry
125095150 CDS
T08100
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor TIAM1-like
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04014
Ras signaling pathway
llv04015
Rap1 signaling pathway
llv04024
cAMP signaling pathway
llv04062
Chemokine signaling pathway
llv04530
Tight junction
llv04810
Regulation of actin cytoskeleton
llv05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
125095150
04015 Rap1 signaling pathway
125095150
04024 cAMP signaling pathway
125095150
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125095150
09142 Cell motility
04810 Regulation of actin cytoskeleton
125095150
09150 Organismal Systems
09151 Immune system
04062 Chemokine signaling pathway
125095150
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
125095150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
llv04990
]
125095150
Domain-containing proteins not elsewhere classified [BR:
llv04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
125095150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tiam_CC_Ex
RhoGEF
PH
RBD
PH_9
PDZ
PDZ_2
PDZ_6
PH_11
RNA_pol_Rpc82
Motif
Other DBs
NCBI-GeneID:
125095150
NCBI-ProteinID:
XP_047577125
LinkDB
All DBs
Position
1:13296041..13679651
Genome browser
AA seq
1566 aa
AA seq
DB search
MGNAESQNVEHEFYGEKHASLGRKHTSRSLRLSHKARRTRHASSGKVIHRNSEVSTRSSS
TPSIPQSLAENGLEPFSQEGTLEDFGSPIWVDRVDMGLRPVSYTDSSVTPSADSSVVLTA
ASVQSMPDSEETRLYGDDATYLADGGRRQHLYTSNGPTFMETASFKKKRSKSADIWREDS
LEFSLSDLSQEHLTSNEEILGSTEEKDCEEARGMEPRASPRQLSSCQRANSLGDLYAQKN
AGVTANGGPRSKFAGYCRNLVSDIPDLADHKMPPAATEESLPYSNYNTLPCRKSHCLSEG
ATNPQISHSNSMQGRRAKTTQDVNAGEGSEFADSGIEGATTDTDLLSRRSNATNSSYSPP
TGRAFVGSDSGSSSTGDAARQGVYENFRRELEMSTTNSESLEEAGSAHSDEQSSGTLSSP
GQSDILLTAAQGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYESD
GRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTTSQTELENWIT
AIHSACAAAVARHHHKEDTLRLLKSEIKKLEQKIDMDEKMKKMGEMQLSSVTDSKKKKTI
LDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFASRPTKVAMGRLGIFSVS
SFHALVAARTGEAGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKKKQGRPSINQVFGEGT
DAVKKSLEGIFDDTVPDGKREKEMVLPSVHQHNPDCDIWVHEYFTPSWFCLPNNQPALTV
VRPGDTARDTLELICKTHQLDHSAHYLRLKFLIENKMQHYVPKPEEDIYELLYKEIEICP
KVTRNIQIEKSDTASDNYGFSLSSVEEDGVRRLYVNSVKETGLASKKGLKAGDEILEISN
RAAGTLNSSVLKDFLAQPSLGLLVRTCPEPEGGVQLLDCPPHRADGPVDPSESPLAFLSS
NPGHGLCSEQGSSAETAPEETEGPDLESSDETDHSSKDATGPQLATMRQLTDADKLRKVI
CELLETERTYVKDLNCLMERYLKPLQKETFLTQDELDVLFGNLTEMVEFQVEFLKTLEDG
VRLVPDLEKLEKVDQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKTDPAF
KAFLDAQNPKQQHSATLESYLIKPIQRILKYPLLLKELFALTDAESEEHYHLDVAIKTMN
KVASHINEMQKIHEEFGAVFDQLIAEQTGEKKEVADLSMGDLLLHTTVIWPNPPASLGKW
KKEPELAAFVFKTAVVLVYKDGSKQKKKLVGSHRLSIYEDWDPFRFRHMIPTEALQVRAL
ASADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKAVHSILRDKHRRQLLKT
ESLPSSQQYVPFGGKRLCALKGARPAMSRAVSAPSKSLGRRRRRLARNRFTIDSDAVSAS
SPEKESQQPPGGGTLTXWVEEQFDLAQYEEQDDIKETDILSDDDEFCESVKGAAVDTDLR
EQLQAASISHRREAGEPLDSHASRMTQLKKQAALSGVNGGLESPGQEVIWVRREDLAPSK
KLNTEI
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgcagaaagtcaaaatgtagagcatgagttttatggagaaaagcatgccagc
ctgggccgtaagcacacatcccgctcactgcgcctgtcacacaaggctcggcggacgagg
cacgcgtcctcggggaaggtgatccacaggaactccgaagtgagcacacgatccagcagc
acgcccagcatcccgcagtccctggccgagaatggcctggagcccttctcccaggagggt
accctagaggacttcggcagccccatttgggtggaccgagtggacatgggcttgagacct
gtgtcgtacaccgattcttctgtcactcccagcgcggacagcagcgtcgtcctcacagcc
gcctctgtgcagagcatgccagactcggaggagacccggctctacggggatgacgctacg
tatttggctgacggaggcaggaggcagcatctctacacatccaacgggcccactttcatg
gagacggcgagctttaagaagaaacgctccaaatctgcagacatctggcgggaggacagc
ctggaattctcactctccgatctgagccaagaacatttaacaagcaacgaagagatcttg
ggttccaccgaagagaaagactgcgaggaggctcggggcatggaaccccgggcgagcccc
cggcagctcagcagctgtcagcgtgccaattccctgggtgacttgtatgctcagaaaaac
gccggggtgacggcaaacggggggcccaggagcaagttcgcaggctactgtcggaatctg
gtgtctgatattcccgatcttgcagaccataagatgccaccagctgctaccgaagagtct
cttccctacagtaattacaacacactcccctgtaggaagtctcactgtctttctgaaggt
gccactaacccacagattagccatagcaacagcatgcaaggcagaagagcaaaaacaact
caggatgttaacgccggcgagggcagtgagttcgcggacagtgggatcgaaggggccacc
accgacacggacctcctgtccaggcgatccaatgccaccaactccagctactcgcccccc
accggccgcgccttcgtgggcagcgacagcggcagcagctccaccggggatgcggcccgc
cagggggtgtacgagaatttccgccgggagctggagatgagcaccaccaacagcgagagc
ctggaggaggcgggctcggcgcacagcgacgagcagagcagcggcaccctgagctcgccg
ggccagtcggacatcctgctcacggccgcgcagggcacggtgcgcaaggccggggcgctg
gccgtcaagaacttcctcgtgcacaagaagaacaagaaggtggagtcggccacccggcgg
aagtggaagcactactgggtgtccctgaaagggtgcacactctttttctacgagagcgac
ggcaggtctggaatagaccacaacagcatccccaagcacgctgtctgggtggagaacagc
attgtgcaggctgtgcctgagcaccccaaaaaggacttcgtcttctgcctcagcaattcc
ctgggtgacgctttcctctttcagaccaccagccagacggagctggagaactggatcacc
gccatccactccgcctgcgcagcggccgtcgcgaggcaccaccacaaggaagacacgctc
cggcttctcaagtctgaaatcaaaaaactggaacagaagattgatatggatgaaaagatg
aagaaaatgggcgagatgcagctgtcttcagtcactgattcaaagaagaagaaaactata
ttggaccagatctttgtttgggagcaaaaccttgaacagttccaaatggacctatttcgt
taccgctgttacttagctagcctccaaggtggggagctgccaaaccccaaaaggcttctt
gcttttgcaagccgaccaacaaaagtggcgatgggccgtcttgggatcttttctgtatca
tcctttcatgccctggtggcagctcgcactggtgaagctggagtgagacgtcgtactcag
gccatgtccagatctgccagcaagcggaggagcaggttttcttccctttggggtctggac
actacctccaaaaagaagcagggacgccccagcatcaatcaggtgttcggtgagggaacg
gatgctgtaaagaaatctttagagggaatatttgatgacactgttccagatggcaagagg
gaaaaagaaatggtgttgcccagcgtccatcagcacaatcccgactgcgacatttgggtc
catgaatatttcactccgtcctggttctgtctgccaaataaccagccagccctgaccgtc
gtccggcctggggacactgcccgggacaccctggagctgatctgcaagacacatcagctg
gatcattctgctcattacctgcgtctgaaattcctaatagaaaacaaaatgcaacactac
gttccaaagcccgaggaggacatttatgagctgctgtacaaagaaattgaaatttgccca
aaagtcactcggaacatccagattgagaagtcagatacggccagtgataattatgggttt
tcactttcctctgtggaagaagatggtgttcgaaggctgtacgtgaatagtgtaaaggaa
accggtttagcttccaagaagggcctgaaagcgggagatgagattctcgagatcagtaat
cgtgctgcaggcaccctgaactcctctgtgctcaaagatttcctcgcacagccgtccctg
ggcctcctggtgaggacctgccctgagcccgagggaggcgtgcagctgctggactgcccg
ccccaccgagccgacggccccgtggaccccagcgagagccccctggccttcctcagcagc
aacccaggacacgggctctgcagcgagcagggcagtagcgccgagaccgctccggaggag
accgaggggccggacttggaatcctcagatgaaactgatcacagcagcaaggacgccacc
gggcctcagctggccaccatgaggcagctcacagacgccgacaagctgcgcaaggtgatc
tgcgagctcctggagacggagcgcacctacgtgaaagacttaaactgtctcatggagaga
tacctaaaacctcttcaaaaagaaactttcctcacccaagatgagcttgatgtgctcttt
ggaaatctaaccgaaatggtagagtttcaagtagaatttctgaaaactctagaagatgga
gtgaggctggtacccgatttggaaaagcttgagaaagttgatcagttcaagaaagtgctg
ttctctctggggggatcctttctgtattacgctgaccgcttcaagctctatagtgccttc
tgcgccagccacacgaaggtccccaaggtgctggtgaaagccaagacggacccggctttc
aaggcgttcttagacgcccagaacccgaaacagcagcactcggccaccctcgagtcttac
ctcatcaagcccatccagaggatcctcaagtacccgcttctgctgaaggagctctttgcc
ctgacggacgccgagagcgaggagcactaccatctggacgtggccatcaagaccatgaac
aaggttgcaagtcatatcaatgaaatgcagaaaattcatgaagaatttggggctgtgttc
gaccagctcattgctgagcagactggtgagaagaaagaggttgcagacctgagcatgggg
gacctgcttttgcacaccacggtgatatggccaaacccaccggcctccctgggaaagtgg
aaaaaggagccagaattggcagcctttgtcttcaaaactgctgtggtccttgtatataaa
gatggctccaaacagaagaagaaacttgtaggatctcacaggctttcaatttatgaggac
tgggaccccttccgatttcggcacatgatccccactgaagctctgcaggttcgagctttg
gcgagcgcagatgcagaagcaaacgctgtgtgtgaaattgtccatgtaaaatctgaatct
gaaggcaggccggagagggtcttccatctgtgctgcagctctccagagagccggaaagac
ttcctgaaggctgtgcattcaatcctgcgtgataagcacagaagacagctcctcaaaacc
gaaagccttccttcatcccagcaatatgtacctttcggagggaaaagattgtgtgcgctc
aaaggggccaggccggccatgagccgggcagtgtctgccccaagcaagtctcttgggaga
aggaggcggcgactggctcgaaacaggtttaccattgactctgacgccgtctcggccagc
agcccggagaaagagtcccagcagccccccggtggcgggacactgaccnngtgggtcgag
gaacagtttgatcttgctcagtacgaggagcaggatgacatcaaggagacagacatcctc
agtgacgatgatgagttctgcgagtccgtgaagggcgccgcagtggacacagacctccgg
gagcagcttcaggctgcctccatcagtcatcggagagaggccggagagcccctggatagt
cacgcgtcccgcatgacacaactcaagaagcaagccgccctctcgggcgtcaatggaggc
ctggagagcccgggccaggaagtcatttgggttaggcgcgaagacttggccccatccaag
aaactgaatactgagatctga
DBGET
integrated database retrieval system
