Lutra lutra (Eurasian river otter): 125096011
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Entry
125096011 CDS
T08100
Name
(RefSeq) zinc finger protein GLI2-like isoform X1
KO
K16798
zinc finger protein GLI2
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04340
Hedgehog signaling pathway
llv04390
Hippo signaling pathway
llv05200
Pathways in cancer
llv05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125096011
04390 Hippo signaling pathway
125096011
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125096011
09162 Cancer: specific types
05217 Basal cell carcinoma
125096011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125096011
Transcription factors [BR:
llv03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
125096011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
125096011
NCBI-ProteinID:
XP_047578581
LinkDB
All DBs
Position
3:105916298..106162975
Genome browser
AA seq
1555 aa
AA seq
DB search
METSASVTATEKKDAKSGSLEGAAFPDPGRKASALAVAAAAAVAAHGVPQHRLPPLHAPL
PIAMRHQEGRYHYESHSAHGVHGPPALSGSPVISDISLIRLSPHPAGPGESPFNAPHPYV
SPHMEHYLRAVHSSPTLPAISAARGLSPADVAHEHLKERGLFGLPAPGTNPSDYYHQMTL
MAGHPAPYGDLLMQSGGTASAPHLHDYLNPVDVSRFSSPRVTPRLSRKRALSISPLSDAS
LDLQRMIRTSPNSLVAYINNSRSSSAASGSYGHLSAGTLSPAFTFPHPINPVAYQQILSQ
QRGLGSAFGHTPPLIQPSPTFLAQQPMPLASINATPTQLSSSSNCLSNATQNKPSSESAV
SSTVNPIVIHKRSKVKTEAEGLRPASPLTLTQEQLADLKEDLDRDDCKQEAEVIIYETNC
HWEDCTKEYDTQEQLVHHINNEHIHGEKKEFVCRWQACTREQKPFKAQYMLVVHMRRHTG
EKPHKCTFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHS
NEKPYICKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKQRNDVHLRAPLLKENGDNEAS
AEPGGRGSEESAEASSTSQAMEDCLHVKAIKTESSGLCQSSPGAQSSCSSEPSPLGSAPN
NDSGVEMPGTGPGSLGDLTALDDTPPVADASALAAPSAGGLQLRKHMTAMHRFEQLKKEK
LKSLKDSCSWAGPAPHTRNTKLPPLPGSGSILENLSGGGPAGLLPNPRLSELSASEVTML
SHLQERRDSSTSTVSSAYTVSRRSSGISPYFSSRRSSEASPLGAGRPHNASSADSYDPIS
TDASRRSSEASQCSGVAGGGGAGPLSLTPAQQYSLRAKYAAATGGPPPTPLPGLERASLR
TRLAPPVSCPRPLGPRRGSDGPAHGHAGPAPAFPHEAPGGGARRASDPVRRPDTLAAPRV
QRFHSAHDVNPAPLPPCADRRGLRLSGPASADGGLVRSAYSPRPPSISEHVAMEALVAGA
DSAGPDMGLVLPEDDLVLPDDVVQYIKAHAGGALDDSPPQAYPPESTCFSENPKLPSPGL
HGPRRMVAADSNVGPSALGLGGCQLGYGAPSSLNKNSMPVQWNEVSSGTVDTLASQGKPS
PFPQGNLAVVQQKPAFGHYTGYGPQGLPLSPGDLDSAQTHFQPCGGGPSVPRINYMRQPG
TGAPCPNMTTTGSPHTNYGQAHPQLSPSTMGGALNPYPPSCSNMVAKPVHLGLPQQMEVA
PEAAMMGSNRRELGITNSNLTGMPPLHSTQSYPQQSHHLATPMSQEGYRQGSHLLPSQQP
GFMEPQQGAVGVAGSSFGLVQPRPPAEPSPAGCHRGVRAGLQLAYARATSHAMATVSASQ
EMADVPKGAMGNVVSRPPQPAPQDVAGAQDHSMLYYYGQIHMYEQNGGLENHVGCQVVRP
QPPQPQACPDSIQPQPLPSPGVNQVSSTVDSQLLEAPQIDFDAIMDDGDHSSLLSGALSP
SLLHSLSQNSSCLTTPRNSLTLPSIPTGISNMAVGDMSSMLTSLAEESKFLNMMT
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atggagacgtcggcctcagtcactgccacagagaagaaggacgccaaaagtgggagcctg
gagggtgccgctttccccgacccaggcaggaaggcttctgctctcgcagtggccgctgcg
gcggcggtagctgcccacggagtgccgcagcaccgcttgccaccactccatgctccctta
ccgattgccatgagacaccaggagggaaggtaccattatgagtcccactctgcccacggc
gtgcatgggcctcctgccctaagcggcagccctgttatctccgacatttcgttgatccgg
ctttccccacaccctgccgggcctggggagtcccccttcaacgccccccacccgtacgtg
agcccccacatggagcattacctccgtgccgtgcacagcagccccacgctccccgcgatc
tctgcagcccggggtctgagccccgctgacgtggctcacgagcacctcaaggagaggggg
ctgtttggcctccccgcaccaggcaccaacccctcagactattaccaccagatgaccctc
atggcaggccaccctgcaccctacggggacctgctgatgcagagtgggggtactgccagt
gcaccccatctccacgactacctcaatccagtggatgtgtcgcgtttctccagcccgcgg
gtgacgccgcgcctgagccgcaagcgggcgctgtccatctccccgctctccgatgccagc
ctggacctgcagcggatgatccggacctcccccaactcgctggtggcctacatcaacaac
tcccgaagcagctctgcagccagcggctcctacgggcacctgtcggcaggcaccctcagc
cctgcttttacctttccccatcccatcaacccggtggcctaccagcagatcctgagccag
cagaggggcctgggatctgcctttggacatactccacccttgatccagccctcacccacc
ttcctggcccagcagcccatgcccctcgcctctatcaacgccacgcccacccagctcagc
agcagcagcaactgtctgagcaacgccacccagaacaagccgagcagcgagtcggctgtg
agcagcacggtcaaccccatcgtcattcataagcgcagcaaggtcaagacagaggccgag
ggcctgcggccagcctccccactgaccctgacgcaggagcagctggctgacctcaaggaa
gacctggacagggatgactgcaagcaggaggccgaggtgatcatctacgagaccaactgc
cactgggaggactgcaccaaggagtatgacacgcaggaacagctggtgcatcacataaac
aacgagcacatccacggcgagaagaaggagtttgtgtgccgctggcaggcctgcacgcgg
gagcagaagcccttcaaggcgcagtacatgctcgtcgtgcacatgcgcagacacacgggc
gagaagccccacaagtgtacgttcgagggatgctcaaaggcctactctcgcctggagaac
ctgaagacgcacctgcgttcccacactggggagaaaccgtacgtgtgcgagcacgagggt
tgcaacaaggccttctccaatgcctccgaccgcgccaagcaccagaaccgcacccactcc
aacgagaaaccctatatctgcaagatcccaggctgtaccaagcgatacacagaccccagc
tctctcaggaagcacgtgaaaacggtacatggccccgacgctcacgtcaccaagaagcag
cgcaacgatgtgcacctccgtgcccccctgctcaaggagaacggggacaatgaggccagt
gctgagcccggtggccggggctctgaggagagtgccgaggccagcagcaccagccaggcc
atggaggactgcctacacgtcaaagccatcaagaccgagagctccgggctgtgtcagtcc
agccccggggcccagtcgtcctgcagcagtgagccctctcccctgggcagtgcccccaac
aatgacagcggcgtggagatgccggggacagggcccgggagcctgggcgacctgacggct
ctggatgacacgcccccggtggccgatgcctcagccctggccgctccctctgctggtggc
ttgcagctgcgcaaacatatgacggccatgcaccggttcgagcagctcaagaaggagaag
cttaagtcgctcaaggattcctgctcctgggctgggccagctccacacacccggaacacc
aagctgcctcccctcccaggaagtggctccatcctggaaaacctcagcggcggtgggcca
gccgggctgctgcccaacccgcgtttgtcggagctgtccgcgagcgaggtgaccatgctg
agccacctgcaggagcgccgagacagctccaccagcacagtcagctccgcctacaccgtg
agccgccgctcctctggcatctctccctacttctccagccgccgctccagcgaggcgtcg
cccctgggcgccggccgcccccacaacgccagctctgccgactcctacgacccgatctcc
accgacgcgtcgcggcgctcgagcgaggccagccagtgcagcggcgtcgcgggcggcggg
ggcgcggggcctctcagcctcactccggcgcagcagtacagcctgcgggccaagtacgcc
gcggccaccggcggaccgcccccgaccccgctacccggcctggagcgcgcgagcctgcgg
accaggctggcgccgcctgtgtcctgcccgcgcccgctagggccgcggcggggcagcgat
gggcccgcccacggccacgcggggcccgcgcccgccttcccccacgaggcgccaggcggt
ggggcgcggcgggccagtgacccagtgagacggcccgacaccctggccgcgccgcgggtg
cagcgcttccacagcgcccatgatgtgaacccggcccctctgccgccctgcgccgaccgg
cgaggcctccgcctgtcaggccccgcaagcgccgatggcggcctggtccgcagcgcctac
tcgccccggccgcccagcattagtgagcacgtggctatggaggccttggtggcgggcgcg
gacagcgcagggcctgacatgggcctcgtgctgcccgaggacgaccttgtgctgcccgat
gacgtggtgcagtacatcaaggcacacgccggtggggccctggacgacagccccccgcag
gcctaccccccggaaagcacctgcttctccgagaaccccaaactgcccagcccggggctg
catggcccgcgcaggatggtggccgccgactccaacgtgggcccctccgccctggggctg
ggaggctgccagctgggctacggggccccctccagcctgaacaaaaacagcatgcctgtg
cagtggaatgaggtgagctccggcactgtggacacgctggccagccaggggaagccttcg
cccttcccgcagggcaacctggctgtggtgcagcagaagccagccttcggccactacaca
ggctatggtcctcaaggtctgcccctgagccccggggacctggacagtgcgcagacacac
ttccagccctgcgggggcggcccctctgtgcctaggataaattatatgcggcagccaggg
acaggtgctccgtgtcccaatatgaccaccaccgggagcccccacaccaactatggccaa
gcccacccccagctgagccccagtaccatgggtggggccctgaacccataccccccatcc
tgcagcaacatggtggccaagccagtccacctggggctcccccagcaaatggaagttgct
cccgaagccgccatgatgggcagcaaccgcagggaacttggaatcaccaattccaacctg
accgggatgccaccccttcactcaacccagagttacccacagcaaagccatcacctggcg
actcccatgagccaggagggctaccgccagggctcccaccttctgccttcccagcaacct
ggcttcatggagccccagcagggtgctgtcggggtggccggatccagctttggcctagtg
caaccccgaccacctgctgagcccagccctgccggctgccaccgtggggtgcgggctggg
ctgcagctggcctatgccagggccaccagccacgccatggccactgtgtcagccagccag
gagatggccgatgtgcccaaaggagcaatgggcaacgtggtgtcccggcctcctcagcca
gccccacaggatgtggccggggcccaggatcacagcatgctctattactatggccagatc
cacatgtacgaacagaatggaggcctggagaaccatgtgggctgccaggttgtgcgaccc
cagccaccgcagccacaggcttgcccagacagcatccagccccagcccttgccctctcca
ggggtcaaccaggtgtccagcacagtggactcccagctcctggaggctccccagattgat
tttgatgccatcatggatgatggcgatcactcaagcctgctttcaggcgccctgagtccc
agcctcctccacagcctttcccagaactcctcctgcctcaccaccccccggaactccctg
actctcccttccatccccacgggcatcagcaacatggctgttggggacatgagctccatg
ctcaccagcctggccgaggagagcaaattcctgaacatgatgacctaa
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integrated database retrieval system
