Lutra lutra (Eurasian river otter): 125101671
Help
Entry
125101671 CDS
T08100
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03018
RNA degradation
llv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125101671
09123 Folding, sorting and degradation
03018 RNA degradation
125101671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125101671
03041 Spliceosome [BR:
llv03041
]
125101671
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125101671
mRNA degradation factors
5'-3' decay
Lsm complex
125101671
Spliceosome [BR:
llv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
125101671
Complex C
U2 snRNP components
125101671
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF8104
DUF8043
Motif
Other DBs
NCBI-GeneID:
125101671
NCBI-ProteinID:
XP_047587976
LinkDB
All DBs
Position
6:complement(131881803..131882141)
Genome browser
AA seq
112 aa
AA seq
DB search
MADDVDQQQQTNTVEEPLDLINLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTVEIEEETYEEIYKSTKRNIPMLFVWGDGVVLVARPLTFSGNKEFIVFGI
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacgtggaccagcaacaacagaccaacaccgtagaagagcccttggatctc
atcaacctcagcctagatgagcgaatttatgtgaaaatgagaaatgacagagagcttcga
ggcagattacatgcttatgatcagcatttaaatatgatattgggagatgtggaagaaact
gtgactaccgtagaaattgaggaggaaacatacgaagagatctataaatcaacaaaacgg
aatattccgatgctttttgtctggggagatggtgttgtactagttgcccgtccattaaca
ttcagcggaaacaaagaatttatcgtgttcggaatatag
DBGET
integrated database retrieval system
