Lutra lutra (Eurasian river otter): 125104839 Help Entry 125104839         CDS       T08100                                  Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism llv  Lutra lutra (Eurasian river otter) Pathway llv04015   Rap1 signaling pathway llv04115   p53 signaling pathway llv04145   Phagocytosis llv04148   Efferocytosis llv04151   PI3K-Akt signaling pathway llv04350   TGF-beta signaling pathway llv04510   Focal adhesion llv04512   ECM-receptor interaction llv04518   Integrin signaling llv04820   Cytoskeleton in muscle cells llv05144   Malaria llv05165   Human papillomavirus infection llv05205   Proteoglycans in cancer llv05206   MicroRNAs in cancer llv05219   Bladder cancer Brite KEGG Orthology (KO) [BR:llv00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     125104839    04350 TGF-beta signaling pathway     125104839    04151 PI3K-Akt signaling pathway     125104839   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     125104839    04518 Integrin signaling     125104839  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     125104839    04148 Efferocytosis     125104839   09143 Cell growth and death    04115 p53 signaling pathway     125104839   09144 Cellular community - eukaryotes    04510 Focal adhesion     125104839   09142 Cell motility    04820 Cytoskeleton in muscle cells     125104839  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     125104839    05205 Proteoglycans in cancer     125104839   09162 Cancer: specific types    05219 Bladder cancer     125104839   09172 Infectious disease: viral    05165 Human papillomavirus infection     125104839   09174 Infectious disease: parasitic    05144 Malaria     125104839  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:llv04131]     125104839   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:llv00536]     125104839 Membrane trafficking [BR:llv04131]  Endocytosis   Phagocytosis    Opsonins     125104839 Glycosaminoglycan binding proteins [BR:llv00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    125104839 SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd TSP1_CFP_C EGF_3 EGF_CA TSP1_ADAMTS cEGF Laminin_G_3 Laminin_G_2 TSP1_CCN EGF Motif Other DBs NCBI-GeneID:  125104839 NCBI-ProteinID:  XP_047593648 LinkDB All DBs Position 7:59336667..59350160 Genome browser AA seq 1170 aa AA seqDB search MGLAWGLSVLFLLHLCGSSRIPESGGDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFR IEDANLIPAVPDDKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLAIERKDRSGHVFSVV SNGKAGTLDLSLTVQGMQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAELD VPIQSVFTRDLASVARLRIAKGGVNDNFQGVLQNVRFVFGTTPEAILRNKGCSSSTNVLL TLDNNVVNGSSPAIRTNYIGHKTKDLQAICGISCDELSSMVLELRGLRTIVTTLQDSIRK VTEENKELAIELRRPPLCYHNGVQYRNNEEWTVDSCTECRCQNSVTICKKVSCPIMPCSN ATVPDGECCPRCWPSDSADDGWSPWSEWTSCSATCGNGIQQRGRSCDSLNNRCEGSSVQT RTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARE TKACKKDACPINGGWGPWSLWDICSVTCGGGVQKRSRLCDSPTPQFGGKDCVGDATEKQI CNKQDCPIDGCLSNPCFAGVKCTSYPDGSWKCGACPPGYGGNGVQCQDVDECKEVPDACF HHNGEHRCENTDPGYNCLPCPPRFTGPQPFGRGVEHATANKQVCKPRNPCTDGTHDCNKN AKCSYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCPN LPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYN HNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLEH NPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDN DGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDNVPDIDDICPENIDISETDFRRF QMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERDD DYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNAL WHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIYD KTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3513 nt NT seq  +upstreamnt  +downstreamnt atggggctagcctggggactcagtgtcctattcctgttgcatttatgtggctccagccgc attccagagtctgggggagacaacagcgtattcgacatctttgaactcaccggagctgct cgtaagggttctgggcgccgactggtgaagggtcccgacccttccagcccagctttccgc atcgaggatgccaacctgatccctgccgtgcccgatgacaagttccaagacctagtggat gccgtgcgggcagagaaaggcttccttctcttggcctccctgaggcagatgaagaagacc cgaggcacactgctggccatagaacggaaagatcgctccggccacgtcttcagtgtggtc tccaatggcaaagccggcaccctggacctgagcctgaccgtgcaggggatgcagcatgtg gtgtcggtggaggaggcgctcctggcgactggccagtggaagagcatcaccctgtttgtg caggaggaccgggcccagctgtacattgactgtgagaagatggagaatgcggagctagat gtccccatccagagcgtcttcaccagggacctggccagcgtggctagactccgcatcgca aaaggaggggtcaatgacaacttccagggggtgctgcagaacgtgaggtttgtcttcgga accacaccggaagccatcctcaggaacaaaggctgttccagctccaccaatgtccttctg accctcgacaacaatgtggtgaacggctccagccctgccatccgcactaactacattggc cacaagacgaaggatctgcaagccatctgcggcatctcctgtgatgagctgtccagcatg gtcttggagttgaggggactgcgcaccatcgtcaccacgctccaggacagcatccgcaaa gtgactgaagagaacaaagagttggccattgagctgaggaggcctcccctctgctaccac aacggagttcagtacaggaataacgaggaatggaccgtggatagctgtacagagtgtcgc tgtcagaactctgttaccatctgcaagaaagtgtcctgccccatcatgccttgctccaat gccacagtccctgatggagaatgctgcccacggtgctggcccagtgactctgcggatgac ggctggtccccatggtctgagtggacctcctgctcagcgacctgtggcaatggaatccag cagcgcggtcgctcttgtgacagtctcaacaaccggtgcgagggttcctccgtccagacg cggacctgccacattcaggagtgtgataagagatttaaacaggatggtggctggagccac tggtccccgtggtcgtcttgttctgtgacctgtggtgatggtgtgatcacaagaattcga ctctgcaattctccgagcccccagatgaacgggaaaccatgtgaaggcgaagcccgggag accaaagcctgcaaaaaggatgcctgccccatcaacggaggctggggtccctggtcactg tgggacatctgttctgtcacctgcggaggaggggtacagaaacgtagccggctctgcgac agccccaccccccagttcggaggcaaggactgtgtcggggacgcaacggaaaagcagatc tgcaacaagcaggactgtccaattgacggatgcctgtctaatccctgctttgctggggtc aagtgtacgagttaccccgatggcagctggaaatgcggtgcctgccccccgggctacggt ggaaatggcgtccagtgtcaagatgtcgatgagtgcaaagaagtgcctgacgcctgcttc caccacaatggcgagcaccggtgtgagaacacggaccccggctacaactgcctgccctgc ccgccgcgcttcacaggcccgcagcccttcggccggggtgtggagcatgccaccgccaac aaacaggtgtgcaagccgcgcaacccctgcacggacgggacgcatgactgcaacaaaaac gccaagtgcagctacctgggccactacagcgaccccatgtaccgctgcgagtgcaagccc ggctacgcgggcaacggcatcatctgcggggaggacacggacctggacggatggcccaac gaagacctggtgtgcgtggccaatgccacctaccactgcaaaaaggataactgccccaac ctgcccaactccgggcaggaggactatgacaaggatggaatcggtgacgcctgtgatgat gatgatgataatgataaaatcccagatgacagggacaactgcccattccattacaacccg gcccagtatgactatgaccgagatgatgtgggagaccgctgtgacaactgcccctacaac cacaacccagaccaggccgacacagacaacaacggggagggagatgcctgcgctgcagac atcgatggagacggtatcctcaatgaacgagacaactgccagtatgtctacaacgtggac cagagggacacggatatggatggggtcggagatcagtgtgacaactgtcctctggaacac aatccagatcagctcgactctgactcagaccgcattggagatacctgtgacaacaatcag gatattgatgaagatggccaccagaacaacctagacaactgtccctatgtgcccaatgcc aaccaggctgaccacgacaaagatggcaagggagatgcctgtgaccatgacgatgacaat gatggcattcctgatgatagggacaactgcagacttgtgcccaatcctgaccagaaggat tcagacggtgatggtcgaggtgatgcttgcaaagatgattttgaccatgacaatgtgcca gacattgatgacatctgtcctgaaaacattgacatcagtgagactgatttccgccgattc cagatgattcctctagatcccaaagggacatcccagaatgacccgaactgggttgtacgc catcagggtaaagaactggtccaaaccgtcaactgtgatcccggacttgctgtaggttat gatgagtttaatgctgtggacttcagtggcaccttcttcatcaacacggaaagggatgat gactacgctgggtttgtgttcggctatcagtctagcagtcgcttttatgttgtgatgtgg aagcaagtcacccagtcctactgggacaccaaccccactagggctcagggatactcaggc ctttccgtgaaagttgtgaactctaccactgggccaggcgagcacctgcggaacgcccta tggcacacgggaaacaccccgggccaggtgcgtactctgtggcatgaccctcgtcacata ggctggaaagatttcactgcctacagatggcgtctcagccaccggcccaagacgggtttc attagagtggtgatgtatgaagggaagaaaatcatggctgactcaggacccatctatgac aaaacctatgctggtggtaggctagggttgtttgtcttctctcaagaaatggtgttcttc tctgacctgaaatatgaatgcagagattcttaa

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