Lutra lutra (Eurasian river otter): 125104839 Help Entry 125104839         CDS       T08100                                  Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism llv  Lutra lutra (Eurasian river otter) Pathway llv04015   Rap1 signaling pathway llv04115   p53 signaling pathway llv04145   Phagosome llv04148   Efferocytosis llv04151   PI3K-Akt signaling pathway llv04350   TGF-beta signaling pathway llv04510   Focal adhesion llv04512   ECM-receptor interaction llv04820   Cytoskeleton in muscle cells llv05144   Malaria llv05165   Human papillomavirus infection llv05205   Proteoglycans in cancer llv05206   MicroRNAs in cancer llv05219   Bladder cancer Brite KEGG Orthology (KO) [BR:llv00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     125104839    04350 TGF-beta signaling pathway     125104839    04151 PI3K-Akt signaling pathway     125104839   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     125104839  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     125104839    04148 Efferocytosis     125104839   09143 Cell growth and death    04115 p53 signaling pathway     125104839   09144 Cellular community - eukaryotes    04510 Focal adhesion     125104839   09142 Cell motility    04820 Cytoskeleton in muscle cells     125104839  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     125104839    05205 Proteoglycans in cancer     125104839   09162 Cancer: specific types    05219 Bladder cancer     125104839   09172 Infectious disease: viral    05165 Human papillomavirus infection     125104839   09174 Infectious disease: parasitic    05144 Malaria     125104839  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:llv04131]     125104839   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:llv00536]     125104839 Membrane trafficking [BR:llv04131]  Endocytosis   Phagocytosis    Opsonins     125104839 Glycosaminoglycan binding proteins [BR:llv00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    125104839 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 EGF_CA TSP1_ADAMTS cEGF Laminin_G_3 Laminin_G_2 TSP1_CCN EGF Motif Other DBs NCBI-GeneID:  125104839 NCBI-ProteinID:  XP_047593648 LinkDB All DBs Position 7:59336667..59350160 Genome browser AA seq 1170 aa AA seqDB search MGLAWGLSVLFLLHLCGSSRIPESGGDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFR IEDANLIPAVPDDKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLAIERKDRSGHVFSVV SNGKAGTLDLSLTVQGMQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAELD VPIQSVFTRDLASVARLRIAKGGVNDNFQGVLQNVRFVFGTTPEAILRNKGCSSSTNVLL TLDNNVVNGSSPAIRTNYIGHKTKDLQAICGISCDELSSMVLELRGLRTIVTTLQDSIRK VTEENKELAIELRRPPLCYHNGVQYRNNEEWTVDSCTECRCQNSVTICKKVSCPIMPCSN ATVPDGECCPRCWPSDSADDGWSPWSEWTSCSATCGNGIQQRGRSCDSLNNRCEGSSVQT RTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARE TKACKKDACPINGGWGPWSLWDICSVTCGGGVQKRSRLCDSPTPQFGGKDCVGDATEKQI CNKQDCPIDGCLSNPCFAGVKCTSYPDGSWKCGACPPGYGGNGVQCQDVDECKEVPDACF HHNGEHRCENTDPGYNCLPCPPRFTGPQPFGRGVEHATANKQVCKPRNPCTDGTHDCNKN AKCSYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCPN LPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYN HNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLEH NPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDN DGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDNVPDIDDICPENIDISETDFRRF QMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERDD DYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNAL WHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIYD KTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3513 nt NT seq  +upstreamnt  +downstreamnt atggggctagcctggggactcagtgtcctattcctgttgcatttatgtggctccagccgc attccagagtctgggggagacaacagcgtattcgacatctttgaactcaccggagctgct cgtaagggttctgggcgccgactggtgaagggtcccgacccttccagcccagctttccgc atcgaggatgccaacctgatccctgccgtgcccgatgacaagttccaagacctagtggat gccgtgcgggcagagaaaggcttccttctcttggcctccctgaggcagatgaagaagacc cgaggcacactgctggccatagaacggaaagatcgctccggccacgtcttcagtgtggtc tccaatggcaaagccggcaccctggacctgagcctgaccgtgcaggggatgcagcatgtg gtgtcggtggaggaggcgctcctggcgactggccagtggaagagcatcaccctgtttgtg caggaggaccgggcccagctgtacattgactgtgagaagatggagaatgcggagctagat gtccccatccagagcgtcttcaccagggacctggccagcgtggctagactccgcatcgca aaaggaggggtcaatgacaacttccagggggtgctgcagaacgtgaggtttgtcttcgga accacaccggaagccatcctcaggaacaaaggctgttccagctccaccaatgtccttctg accctcgacaacaatgtggtgaacggctccagccctgccatccgcactaactacattggc cacaagacgaaggatctgcaagccatctgcggcatctcctgtgatgagctgtccagcatg gtcttggagttgaggggactgcgcaccatcgtcaccacgctccaggacagcatccgcaaa gtgactgaagagaacaaagagttggccattgagctgaggaggcctcccctctgctaccac aacggagttcagtacaggaataacgaggaatggaccgtggatagctgtacagagtgtcgc tgtcagaactctgttaccatctgcaagaaagtgtcctgccccatcatgccttgctccaat gccacagtccctgatggagaatgctgcccacggtgctggcccagtgactctgcggatgac ggctggtccccatggtctgagtggacctcctgctcagcgacctgtggcaatggaatccag cagcgcggtcgctcttgtgacagtctcaacaaccggtgcgagggttcctccgtccagacg cggacctgccacattcaggagtgtgataagagatttaaacaggatggtggctggagccac tggtccccgtggtcgtcttgttctgtgacctgtggtgatggtgtgatcacaagaattcga ctctgcaattctccgagcccccagatgaacgggaaaccatgtgaaggcgaagcccgggag accaaagcctgcaaaaaggatgcctgccccatcaacggaggctggggtccctggtcactg tgggacatctgttctgtcacctgcggaggaggggtacagaaacgtagccggctctgcgac agccccaccccccagttcggaggcaaggactgtgtcggggacgcaacggaaaagcagatc tgcaacaagcaggactgtccaattgacggatgcctgtctaatccctgctttgctggggtc aagtgtacgagttaccccgatggcagctggaaatgcggtgcctgccccccgggctacggt ggaaatggcgtccagtgtcaagatgtcgatgagtgcaaagaagtgcctgacgcctgcttc caccacaatggcgagcaccggtgtgagaacacggaccccggctacaactgcctgccctgc ccgccgcgcttcacaggcccgcagcccttcggccggggtgtggagcatgccaccgccaac aaacaggtgtgcaagccgcgcaacccctgcacggacgggacgcatgactgcaacaaaaac gccaagtgcagctacctgggccactacagcgaccccatgtaccgctgcgagtgcaagccc ggctacgcgggcaacggcatcatctgcggggaggacacggacctggacggatggcccaac gaagacctggtgtgcgtggccaatgccacctaccactgcaaaaaggataactgccccaac ctgcccaactccgggcaggaggactatgacaaggatggaatcggtgacgcctgtgatgat gatgatgataatgataaaatcccagatgacagggacaactgcccattccattacaacccg gcccagtatgactatgaccgagatgatgtgggagaccgctgtgacaactgcccctacaac cacaacccagaccaggccgacacagacaacaacggggagggagatgcctgcgctgcagac atcgatggagacggtatcctcaatgaacgagacaactgccagtatgtctacaacgtggac cagagggacacggatatggatggggtcggagatcagtgtgacaactgtcctctggaacac aatccagatcagctcgactctgactcagaccgcattggagatacctgtgacaacaatcag gatattgatgaagatggccaccagaacaacctagacaactgtccctatgtgcccaatgcc aaccaggctgaccacgacaaagatggcaagggagatgcctgtgaccatgacgatgacaat gatggcattcctgatgatagggacaactgcagacttgtgcccaatcctgaccagaaggat tcagacggtgatggtcgaggtgatgcttgcaaagatgattttgaccatgacaatgtgcca gacattgatgacatctgtcctgaaaacattgacatcagtgagactgatttccgccgattc cagatgattcctctagatcccaaagggacatcccagaatgacccgaactgggttgtacgc catcagggtaaagaactggtccaaaccgtcaactgtgatcccggacttgctgtaggttat gatgagtttaatgctgtggacttcagtggcaccttcttcatcaacacggaaagggatgat gactacgctgggtttgtgttcggctatcagtctagcagtcgcttttatgttgtgatgtgg aagcaagtcacccagtcctactgggacaccaaccccactagggctcagggatactcaggc ctttccgtgaaagttgtgaactctaccactgggccaggcgagcacctgcggaacgcccta tggcacacgggaaacaccccgggccaggtgcgtactctgtggcatgaccctcgtcacata ggctggaaagatttcactgcctacagatggcgtctcagccaccggcccaagacgggtttc attagagtggtgatgtatgaagggaagaaaatcatggctgactcaggacccatctatgac aaaacctatgctggtggtaggctagggttgtttgtcttctctcaagaaatggtgttcttc tctgacctgaaatatgaatgcagagattcttaa

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