KEGG   Lutra lutra (Eurasian river otter): 125107011
Entry
125107011         CDS       T08100                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3-like
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03250  Viral life cycle - HIV-1
llv05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    125107011
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    125107011
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:llv03019]
    125107011
Messenger RNA biogenesis [BR:llv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     125107011
SSDB
Motif
Pfam: APOBEC2 NAD2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1 Toxin-deaminase MafB19-deam
Other DBs
NCBI-GeneID: 125107011
NCBI-ProteinID: XP_047597520
LinkDB
Position
8:135394144..135421189
AA seq 690 aa
MDAGSEAWDRQLLDEDTFTENFHNDRRVCKTYLCYEVEHPGQGSGIPPGQDKGVLRNKSD
QDPRLSRHAESFLLEQIQSWNLNPEHQYRVTCFLSWSPCADCAQRMAEFLGNNSHVSLNL
YASRIYSLGSYEQGLCTLKRAGASIAIMTAREFEHCWDTFVLHQGRSFQPWKSLDKESQK
FSETLQDILKIPSKRLSSPAGLLGPQWQLPPDRSSSSRRGLDPGREREGTDRTTSEPLEQ
PGTEEAMCAGSGGLRRVESGNAATRGPSPPTPPPGQSRKEVGHPRSGLGGIGSGSFPKAR
LVRGMDPWHHDPRDPLEKISPGTFFFHFPSLCYASGRKLCYLCFQVEGEGEEDSWYDLGV
FQNKVYPQAPCHAEACFLSWFRDQNLPPEGHYRVTWFLSWSPCPTCAEDVVEFLEEYRNV
TLSIYTARLYYFWDPDFQDGLHNLWSAGVDLDIMSFEDYEYCWETFVDHKGMHFQSWDLL
RDNDLLAEELENILRSTMNPLRREIFYHQFGNQPRAPKPYRRRKTYLCYQLKPHEGPIMA
RVCLQNKKKRHAEIRFIDNIRAQQLDQSQRLEITCYLTWSPCPTCAEELAVFVQDHPHIS
LRLFASRLYFHWRWKYQKGLSRLHSSRIPVAVMRLQEFEDCWRNFVDNQGDPFQPWNKLE
QYSKSITRRLQRILEHPQNNLENNFRNLHI
NT seq 2073 nt   +upstreamnt  +downstreamnt
atggatgctggctcagaggcctgggacaggcagctgctggatgaggacactttcaccgag
aacttccacaatgataggagggtgtgcaagacctacctgtgctacgaggtggagcatccc
ggtcagggatccgggattcctccgggccaggacaagggcgtcctgcgcaataagagtgac
caggaccccaggctctcccgccacgcggagtccttcctgctggagcagatccagtcctgg
aacctgaacccggaacaccagtacagggtcacctgctttctctcctggagcccctgtgct
gactgtgcccagcgtatggctgagtttctggggaacaacagtcacgtgagcctgaacctc
tatgcctcccgcatctacagcctgggaagctatgagcaggggctgtgcaccctgaagagg
gctggggccagcatcgccatcatgaccgccagggagtttgagcactgctgggacaccttc
gtgctccaccagggaagaagcttccagccctggaagagtctggacaaggagagtcagaaa
ttctctgagaccctgcaggacattctcaagatcccctccaagcgcctgtcttctcctgct
ggactcctggggccccagtggcagctgcccccagacagaagctcctctagccggcgtggc
ctagacccggggcgggagagagagggaacagaccggacaacttcagagcctcttgagcag
cctggcacggaggaggccatgtgcgcgggcagcgggggcctccgcagagtggagagtgga
aatgcagccacccgagggccctcccccccaaccccacccccaggccaaagcaggaaggag
gtggggcatccccgcagtggcctgggaggtatcggatctgggagctttcctaaagcaagg
ctggtgagaggaatggatccctggcaccatgacccaagagaccccctggagaagataagt
cctggaaccttcttcttccacttcccaagcctgtgctatgcttcagggcggaaactctgc
tacctctgtttccaagtggaaggagagggggaggaggactcctggtatgacttgggggtc
tttcaaaacaaggtctatccccaggctccctgccacgcagaagcctgcttcctctcttgg
ttccgtgaccagaatctgccccctgaagggcattaccgtgtcacctggttcttatcctgg
agcccctgccccacctgtgcagaggatgtggttgagttcctggaggaatacaggaacgtc
acgctgagcatctatactgcccgcctctactacttctgggacccagatttccaggatggg
ctccacaacctgtggagtgcaggggtcgatctggatatcatgtcgtttgaagattatgaa
tactgttgggaaacctttgtggaccacaaggggatgcacttccagagttgggatctatta
agagataatgatttgctggctgaagagctcgagaatattcttagaagcacaatgaatcca
ctacgacgagaaatattctaccatcagttcggcaaccagccccgggccccgaagccctac
cgccggaggaagacctacctgtgctaccagctgaagccacatgagggccccataatggcc
cgagtctgccttcaaaacaagaaaaagcgccatgcagaaatccgctttattgacaatatc
agggcacagcagctggaccagtcccagagattggaaatcacctgctacctgacgtggagc
ccctgccccacctgtgcggaggaactggctgtgtttgtccaagaccatccccacatcagc
ctgcggctctttgcctcccgcctgtatttccactggcgctggaagtatcagaaggggctg
agtcgtctgcatagctccaggatcccagtggccgtcatgagactccaggagtttgaggac
tgttggaggaattttgtagacaaccagggcgatcctttccagccctggaacaagctggaa
cagtacagtaaaagcataactcgtcggcttcagaggatccttgagcacccccagaataat
ttagagaataacttcagaaatttgcacatttga

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