Lutra lutra (Eurasian river otter): 125109052
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Entry
125109052 CDS
T08100
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125109052
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
llv04990
]
125109052
Domain-containing proteins not elsewhere classified [BR:
llv04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
125109052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
EGF_MSP1_1
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
125109052
NCBI-ProteinID:
XP_047601607
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All DBs
Position
9:complement(29553787..29959249)
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AA seq
1718 aa
AA seq
DB search
MAGPWLRWGLLLWAGLLASSAHGRVRRITYVVRPGPGLPAGALPLGGPPRPRTFNVALDA
RYSRGSAGAGAPSRASPGAPAERTRRTSQPGGAALQGLRPPPPPPEPARPGAPGGQLHPK
PGGHPAAAAFAKQGRQVVRSKVPPESQSGGGSRLQVQQKQQLQGVNVCGGQCCHGWSKAP
GSQRCTKPSCVPPCQNGGMCLRPQLCVCKPGTKGKACETIAAQDTSSPGFGGQSPGAASS
WVPPEQAAKRTSLKKADSLPRVSPVAQMTLTLKPKPSVGLSQQIHSQVTPLSSQNVMIHH
GQTQDYMLKPKYFAAQKVISGEQSTEGSFPLRFGQGRVPAPFQLSNHTGRIKVVFTPSIC
KVTCTKGSCQNSCEKGNTTTLISENGHAADTLTATNFRVVICHLPCMNGGQCSSRDKCQC
PPNFTGKLCQIPVHGGSVPKLYQHSQQSGKALGTHVVHSTHTLPLTMTSQQGVKVKFPPN
IVNIHVKHPPEASVQIHQVSRIDGPTGQKAKEAQPGQSQVSYQGLPVQKTQTVHSTYSHQ
QVIPHVYPVAAKTQLGRCFQETVGSQCGKALPGLSKQEDCCGTVGTSWGFNKCQKCPKKP
SYHGYNQMMECLQGYKRVNNTFCQDINECQLQGVCPNGECLNTMGSYRCTCKMGFGPDPT
FSSCVPDTPVISEEKGPCYRLVSSGRQCMHPLSVHLTKQLCCCSVGKAWGPHCEKCPLPG
TAAFKEICPGGMGYTVSGIHRRRPIHHHVGKGPVFVKPKNTQPVAKTTHPPPLPAKEEPV
EALTFSREHGPGVAEPEVATAPPEKEIPSLDQEKTKLEPGQPQLSPGISTIHLHPQFPVV
IEKTSPPVPVEVAPEASTSSASQVIAPTQVTEINECTVNPDICGAGHCINLPVRYTCICY
EGYRFSEQQRKCVDIDECTQAQQLCSQGRCENTEGSFLCICPAGFMASEEGTNCIDVDEC
LRPDVCGEGYCINTAGAFRCEYCDSGYRMTRGGRCEDIDECLTASTCPDEQCVNSPGSYQ
CVPCTEGFRGWNGQCLDVDECLEPQICTNGTCSNLEGSYMCSCHKGYSPTPDHKHCKDID
ECQQGNLCMNGQCRNTEGSFRCTCGQGYQLSAAKDQCEDIDECQYHHLCGNGQCRNTEGS
FLCVCDRGYRASALGDHCEDINECLEDNSVCQGGDCINTEGSYDCTCPDGFQLNDHKGCQ
DINECERPGRCGPRGECLNTDGSFHCVCEQGFSISTDGRTCEDIDECVNNTVCDSHGFCD
NTPGSFRCLCYQGFQAPQDGQGCVDVNECELLSGVCGEAFCENVEGSFLCVCADENQEYS
PMTGQCRSRDSGDLDEDQPKEEKKECYYNLNDASLCDNVLAPNVTKQECCCTSGAGWGDN
CEIFPCPVVGTAEFTEMCPRGKGFVPSGESSYETGGESYKDADECMLFGQEICKNGFCLN
TQPGYECYCKQGTYYDPVKLQCFDLDECQDPSSCIDGQCVNTEGSYNCFCTHPMVLDASE
KRCIPPTESHEQIEETDVYQDLCWEHLSEEYVCSRPLVGKQTTYTECCCLYGEAWGMQCA
LCPMKDSDDYAQLCNIPVTGRRRPYGRDALVDFSEQYAPEADPYFIQDRLLNSFEELQAE
ECGILNGCENGRCVRVREGYTCDCFDGYHLDVAKMTCADVNECDELNNRMSLCKNAKCIN
TEGSYKCVCLPGYVPSDKPNFCTPLNTALNLDKDSDLE
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atggcggggccctggctcaggtgggggctgctgctctgggcagggctgctcgcgtcgtcg
gcgcacggccgggtgcggaggatcacgtacgtggtgcgcccgggccccggcctgccggcg
ggcgccttacccctaggcgggcccccgcgcccgcggaccttcaacgtcgcgctcgacgcc
aggtacagccgcggctctgccggcgccggcgcccccagccgcgcctccccgggggcccct
gcggagcggacgcgacgcacgagccagcccggcggcgcggccctgcaggggctccggccg
ccgccaccgccgccggagccggcgcggcccggggcccccggcgggcagctccaccccaag
cccggcggtcacccggcggccgccgcgttcgccaaacaaggcaggcaagtcgtgcgctcc
aaagtgccgccggagagccagagcggcgggggctcgaggctgcaggttcagcagaagcag
cagctgcagggggtcaatgtctgtggagggcagtgctgccatggctggagtaaggcccct
ggctcccagaggtgcaccaaaccaagctgtgttccaccgtgccagaatggagggatgtgt
ctccggcctcaactctgtgtgtgtaaaccggggaccaagggcaaagcctgtgaaaccata
gctgcccaggacacctcgtcaccaggctttggagggcagagtcccggggctgcttcctct
tgggtccctcctgagcaagcagcaaagcgcacttcgctgaagaaggcagacagtctaccg
cgagtcagtcccgtggcccagatgaccttgaccctcaagccaaagccttcagtgggactg
tcccagcagattcattctcaagtgacacccctttcctcacagaatgtgatgattcatcat
ggccagacccaggattacatgctcaagcccaagtactttgcagcccagaaggtgatttcg
ggagagcagtccactgaaggttcattccctttgagattcgggcagggtcgagtcccggca
ccttttcagttgagtaaccacactggccgcatcaaggtggtctttactccgagcatctgt
aaagtgacctgcaccaagggcagctgtcagaacagctgtgagaaggggaacaccaccact
ctcattagtgagaatggtcacgctgccgacaccctgacggccacgaacttccgagtggtc
atttgccatcttccatgtatgaatggcggccagtgcagctcaagggacaaatgccagtgc
cctccgaatttcacagggaagctttgtcagatcccggtccacggtggcagcgtgccaaaa
ctgtatcagcattcccagcagtcaggcaaggccctgggaacgcatgtagtccactccaca
cataccttgcctctgaccatgaccagccaacaaggagtcaaagtgaaatttcctcccaac
atagtcaacatccatgtgaaacaccctcccgaggcttccgtccagatacatcaggtttca
agaattgacggcccaacaggccagaaggcaaaagaagctcaaccaggccaatcccaagtc
tcttaccaagggcttcctgtccagaagacccagacagtacattccacgtactctcaccag
caagtcatcccccacgtctatcccgtggctgcgaagacgcagcttggccggtgcttccaa
gaaaccgttgggtcacagtgtggcaaggcgctccctggcctttcaaagcaggaggactgc
tgtggaactgtgggtacctcctggggctttaacaaatgccagaaatgccccaagaagcca
tcttatcacggatataaccaaatgatggaatgtctgcaaggttacaagcgggttaacaac
accttttgtcaagatattaatgaatgccagctccagggcgtgtgccctaatggtgagtgt
ttgaataccatgggcagctacagatgtacctgcaaaatgggatttgggccagatcccacc
ttttcaagttgtgttccggatacccctgtgatctctgaagagaaggggccctgttaccgt
ctggtcagttccggaaggcagtgtatgcaccctctgtctgttcacctcaccaagcagctc
tgctgttgtagcgtgggcaaggcctggggcccacactgtgagaaatgtccccttccaggc
acagctgcttttaaggaaatctgtcctggtggaatgggttatacggtttctggcattcat
agacgcaggccaatccatcaccatgtaggtaaaggacctgtatttgtcaagccaaagaac
actcaacctgttgctaaaactactcatcctccacctctcccagccaaggaagagccagtg
gaggccctgaccttctcccgggaacacgggccaggtgtggcggagccagaagtggcaact
gcaccccctgaaaaggaaataccttcattggatcaagagaaaaccaaacttgagcctggt
caaccccagctctctccaggcatctcaactattcacctgcacccacagtttccagtagtg
attgaaaaaacatcacctcctgtgcctgtggaagtagctcccgaagcttctacatcaagt
gccagccaagtgattgcgcctactcaagtcacagaaatcaatgaatgtactgtgaacccc
gatatctgtggagcaggacactgcattaacctacccgtgagatatacctgtatttgctat
gagggctacaggttcagtgagcaacagaggaaatgtgttgatattgatgaatgcactcag
gcccaacagctctgctcccagggacgctgtgaaaacaccgagggaagtttcttgtgtatt
tgcccagcaggatttatggccagtgaggagggtactaactgcatagatgttgacgagtgc
ctgaggccagatgtgtgcggggaagggtactgcatcaatactgcgggggccttccggtgc
gaatactgtgacagcgggtaccgcatgacccggggaggccgttgcgaggatattgacgaa
tgcttgaccgcaagcacttgtccagatgagcagtgtgtgaactctcctgggtcttaccag
tgtgttccctgcacagaagggttccgaggttggaatgggcagtgtcttgacgtggacgaa
tgcctggaaccacagatctgcacaaacggcacgtgctccaaccttgagggctcctacatg
tgttcatgccacaagggttattctccgacgccagaccacaagcactgcaaagatattgat
gaatgtcagcaagggaatctgtgcatgaatgggcagtgcagaaacacggaaggctccttc
aggtgcacctgtgggcagggataccagctgtcagcggcaaaagaccagtgtgaagatatt
gatgagtgtcagtaccatcatctctgcggtaatggacaatgcaggaacacagagggctct
ttcctctgtgtttgtgaccgaggctacagagcatccgcccttggggaccactgtgaagat
ataaatgaatgcttggaggacaacagtgtttgccaaggaggagactgcattaacactgaa
gggtcctatgattgtacttgtccagatggattccagctaaatgaccataaaggatgtcaa
gatattaatgaatgcgaacgacccggacgctgtggtcctcgtggagagtgtctcaacaca
gacggttcttttcactgtgtctgcgaacagggtttctcaatttctacagatggccgtaca
tgtgaagatattgatgaatgtgtaaacaacactgtgtgtgacagtcacgggttttgtgac
aatacgcccggctccttccgctgcctctgttatcagggctttcaggccccacaggatggg
caagggtgtgtggatgtgaacgagtgcgagctgctcagtggggtgtgtggtgaagccttc
tgtgaaaacgtggaagggtccttcctgtgtgtgtgtgctgatgaaaaccaggagtacagc
cccatgactgggcagtgccgctcccgggactccggagacttagatgaagatcaacccaag
gaagaaaagaaagaatgctactataatctcaacgatgccagtctctgtgataacgtgctg
gcccccaacgtcaccaaacaagagtgctgctgtacttccggggccggttggggagacaac
tgtgagatctttccttgcccagtggtggggactgctgaattcactgaaatgtgtcctaga
gggaaaggttttgtccccagtggagaatcctcttacgagacgggtggtgagagctataaa
gatgcggatgaatgcatgctctttgggcaagaaatctgtaaaaatggcttctgtctgaac
actcagcctggttacgaatgctactgtaagcaggggacatactatgatcccgtcaaacta
cagtgctttgatttggatgaatgtcaggaccccagtagttgtattgatggccagtgcgtt
aacacagaaggctcttataactgcttctgtacccacccaatggtcctggatgcttcagag
aaaaggtgtatacccccaacggagtcgcacgaacaaatagaagaaactgatgtctaccag
gacctgtgctgggaacatctgagcgaggagtatgtgtgtagccggcctctcgttggcaag
cagacgacttacacggagtgctgctgtttgtatggcgaggcctggggtatgcagtgtgca
ctctgccccatgaaggattcagacgactatgcccagctgtgtaacatccccgtcacggga
cgccggcgcccatatggacgggatgctttggtggacttcagcgaacagtacgctccagaa
gccgatccctacttcattcaggaccgtttgttaaatagctttgaggagctgcaggctgaa
gagtgtggcatcctcaatggatgcgagaatggtcgctgtgtgagggtgcgggaaggttat
acctgtgactgcttcgatgggtatcacttggacgtggccaagatgacctgtgccgatgta
aacgaatgtgacgagttgaacaaccgaatgtccctgtgcaagaacgccaagtgcatcaac
accgaaggctcctacaagtgcgtgtgtctgcctggctacgtcccttccgacaagcccaac
ttctgcaccccgttgaatactgccttgaatttagacaaagacagtgacctggagtaa
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integrated database retrieval system
