Lactococcus lactis subsp. lactis NCDO 2118: NCDO2118_1074
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Entry
NCDO2118_1074 CDS
T03437
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
llx
Lactococcus lactis subsp. lactis NCDO 2118
Pathway
llx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
llx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCDO2118_1074 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llx03400
]
NCDO2118_1074 (nth)
Enzymes [BR:
llx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCDO2118_1074 (nth)
DNA repair and recombination proteins [BR:
llx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCDO2118_1074 (nth)
Prokaryotic type
NCDO2118_1074 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
RecR_HhH
HHH_5
OrfA
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
AII12559
UniProt:
A0ABC8A5H4
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All DBs
Position
1119491..1120147
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AA seq
218 aa
AA seq
DB search
MLSKKRYLEALEIIEDMFPQAHGELEWETPFQLLIATILSAQATDKGVNKATPALFAAFP
DAQTMSQAKVEEIEKLIRTIGLYKTKAKNILRTSQMLVTDFGDLLPDLPKDKKVLQTLPG
VGRKTANVVLAEAYGIPGIAVDTHVERVSKRLDIVPQKATVLEVEEKLMKLIPQEKWVQA
HHHLIFFGRYHCTAKKPKCADCPVLDYCKFGKKYLKNE
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgttaagtaaaaaaagatatcttgaagctttagaaattattgaagacatgttcccgcaa
gctcacggagaattagagtgggaaactccttttcaactattgattgcgacgattttatct
gcccaagcaactgacaaaggagttaataaggcgacgccggctctttttgccgcttttcca
gatgcacaaacaatgtcacaggcaaaagtggaagaaattgaaaagctgattcggacaatt
ggtctttacaagactaaagctaaaaatattttacggacatcacagatgttagtgaccgac
tttggggaccttttgcctgatttgccaaaggataaaaaggttttacaaactttaccgggg
gtgggtcgaaaaacagcaaatgttgttttagcagaagcttacggaattccagggattgcg
gttgatacacatgttgaaagagtttctaaacgtttggatatcgttccccaaaaagcaaca
gttttagaagttgaagaaaagttgatgaagctgattccgcaagaaaaatgggtacaagca
catcaccatctcattttctttgggcgttatcattgtacagccaaaaagccgaaatgtgca
gactgtcctgttttagattattgtaaatttggaaagaaatatttaaaaaatgaatga
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