Leishmania major: LMJF_25_0740
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Entry
LMJF_25_0740 CDS
T01014
Name
(RefSeq) putative DNA repair protein
KO
K15083
DNA repair protein RAD16
Organism
lma
Leishmania major
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lma03400
]
LMJF_25_0740
DNA repair and recombination proteins [BR:
lma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
LMJF_25_0740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-PARP
zf-RING_2
zf-RING_11
zf-C3HC4_2
ResIII
zf-C3HC4
ERCC3_RAD25_C
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf_RING_Vps8_fungal
PHD
Motif
Other DBs
NCBI-GeneID:
5652484
NCBI-ProteinID:
XP_001683828
UniProt:
Q4QA20
LinkDB
All DBs
Position
25:272222..275500
Genome browser
AA seq
1092 aa
AA seq
DB search
MSNFAKHPDLTLNERLVWRPAKGKEHVYNYIVQKSPTARARCRKCSQLIPKGEMRVGVPI
RHNAGDNGWISAWQHLGCTRMERSESEDYKNTMHGFAALQPEEQAHVVNEVHSTEMPEHL
KPLDPEDLVHRGKMEQMAPPSTLLRHLLPYQKEGMGWMVRQEVESPVKGGILADEMGMGK
TIQTVGMMLAHRINGPTLVVCPVSSMLQWEAEIKEHVVPGSLSVVVVYRTTKVTKEELES
ADVVLTTYPMLEQAWRALISEIKVPCPYCELLFIPRQLVVHNKYFCGPRAKKTQKQAKRE
KHTTPAAASSSRSVQCAETIRKGLRTLHVDMGDEEDAEKEVNAPNATTAQPQRKRGRKGA
VNIEGDPGGKVNGCGTPTAKKGKQEEWGSKVANGCRSSPEKANRKCPVKAEDHNDEGAAL
AQKGKVLQPAAASRGVVGPIGMYQELMREAGRTVLSRWDAARKDDESSSDEEVEDESSEE
SDSDASNLSYNSAAAAAEEAAAAEQASKALEAFRCAACHFQLLRYPFCPRNGQHHVVREE
LRDIIERDTGGDDVDLDASIFHSIKWARVILDEAHRIKGRTTSTARSAFALAAEYRWCLT
GTPLQNRVGDLYSLLRFLRMRPYAHYYCETEGCSCASLSHPFSSTSLHQCVFCGHGPLQH
HSYFNRYILNPINRYGYIGDGRRGMMMLSNDVFSRAMLRRTKVERAADLQLPSLTIQVHC
IKLTKEERNFYESLYKKSTAEFDTFVHKGTVLHNYAHIFQLLSRLRQALDNPLLVMEGMD
VGPVVNVKGVCGICGDGIEGESALKVHPCRHQFHRLCLGQFLESAPDKELHCPTCFVRIN
VDLRQLRQDAEGDDDEGVGGFAAALPPELEDEVNSEISEDDEQTQALQHVESKVKRRTAH
ARPTKKEQRGIFARLDPQKPLHGTKLDAIANYIEEVPKDEKVVVFSQFGSMLDLTQYWLQ
RRSIRAVKLCGSLTLTQRQSVLQAFLHDQNVRVILISLKAGGEGLNLQVANHVVLTDPWW
NPAVEMQAVQRAHRIGQTRPVHAVRFVTEHSVEERMVDLQDKKMLVFEGTIDGKLQSLNK
LTEEDLQFLFTR
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacttcgccaaacatcccgatcttacgctaaacgagcggctggtttggcgacca
gcgaagggcaaggagcacgtctacaactacattgtgcaaaagtctccgacggccagggca
cgatgtcggaaatgctcgcagctgatcccgaagggggagatgcgagttggtgtgcctatt
cgccacaacgcaggcgataatgggtggatctctgcgtggcagcaccttgggtgcacccgc
atggagaggagtgagtcagaggactacaaaaacaccatgcatgggtttgcagcattgcag
ccagaggaacaagcgcatgtggtgaatgaggtccattctacggagatgccagagcatctc
aagccgctggacccggaggacttggtgcaccgaggtaagatggagcaaatggcaccaccg
tcgacgcttctgcggcacctgttgccttatcagaaggagggaatggggtggatggtgcgc
caggaggtcgagtctcccgtcaagggcggtattcttgcagacgagatgggtatgggcaaa
actatccagaccgtcggaatgatgctcgcgcaccgcatcaacggtcccacgctcgttgtc
tgtccggttagctccatgttgcaatgggaggctgaaatcaaggagcatgtggtccctggg
tcgctatcggtagtcgttgtgtaccgcaccacaaaggtgaccaaggaggagctggagagc
gcggatgttgtcctcaccacttacccaatgctggagcaggcctggcgcgctctcatcagc
gagataaaagtaccgtgtccctattgtgaactgctcttcattcctcgtcagttggtggtg
cacaacaagtacttctgtggtcctcgcgccaagaagacacagaagcaggcaaagcgcgaa
aaacacaccacgcctgcggcggcgagtagctcaaggagtgtgcagtgtgccgaaaccatt
cgaaaggggttgcgaacactccacgtagacatgggtgacgaagaggatgccgagaaggag
gtcaatgcgcccaatgctacgacggcacagccgcagcgaaagcgaggtcgcaagggtgcg
gtcaacatcgagggtgacccgggtgggaaggtcaacggttgtggcaccccgacagccaag
aaggggaagcaggaagagtgggggagtaaggtggccaatggttgccgatcgtcacccgag
aaggcaaatcgaaagtgccccgtcaaggcggaagatcacaacgatgagggggccgctctg
gcgcaaaaaggcaaggtgctccagccagctgcggcttcgcggggggtcgttggaccgatc
ggcatgtaccaggagcttatgcgggaagccggccgcaccgtgctcagtcgctgggacgcg
gcgaggaaggatgacgagagcagcagcgatgaggaggtcgaggatgagtccagcgaggaa
agtgacagcgacgcatcgaatttgtcgtacaactctgcagctgctgctgccgaggaagcg
gctgcggcagagcaagcttccaaagccctggaggcgttccgctgcgccgcctgccacttt
cagctgctgcggtaccctttctgccccaggaatggccaacaccacgttgtcagagaggaa
cttcgagacatcatcgaaagggacactggcggcgacgatgtcgacctcgatgcttccatc
tttcactccatcaagtgggcgcgcgttatcctagacgaggcgcaccgcatcaagggtcga
acaacgagcacggcccgctctgccttcgccttggcggccgagtaccgatggtgcctcacc
ggcaccccactacagaatcgcgttggtgatctatacagtcttctgcgctttttgcgcatg
cggccgtacgcacactactactgtgaaacggaaggctgctcgtgcgcctcgctctcgcac
cccttctcgtccacctcgcttcatcagtgcgtcttctgcggtcatggaccgctgcagcac
cactcctatttcaaccgctacattctcaatccgatcaaccgctatggctacatcggggac
gggcgacgcggtatgatgatgctctctaatgacgtattttcccgggcaatgctgcgccgc
accaaggtcgagcgggccgccgacctgcagctgccgtcgttgacaatccaagtgcactgc
atcaagctcacgaaggaggagcgtaacttttacgagtccctgtacaagaagagcacggcg
gaattcgatacgttcgtgcacaagggcacggtgctgcacaactacgcacacattttccag
ctgcttagtcgtctgcgccaggccctcgacaacccactgcttgtgatggaaggcatggat
gttggccctgtggtgaacgtcaagggggtgtgcggcatctgtggcgacggcatcgagggc
gagagtgctctgaaggtgcacccgtgccggcaccagtttcaccgactttgtctcggccaa
ttcctggagagcgcaccggacaaggagctccactgccccacctgctttgtacgaatcaac
gtggatctgcggcagctgcgacaggatgcggagggcgacgatgacgagggcgtcggcggc
tttgcggcagcgttgcctcccgagctggaagatgaggtcaactctgagatcagtgaagac
gacgagcagactcaggcgttgcagcacgtagagagtaaggttaagcggcgtacagcgcac
gccaggccgaccaaaaaggagcagcgcggcattttcgcccggctggacccgcagaagccg
ctgcacggcacgaagctcgatgccattgctaactacatagaggaagttccgaaagacgaa
aaggtggttgtcttctcgcagtttggcagcatgctggacctgacgcagtactggctgcag
cgccgctctataagggctgtaaagctctgtgggtcgctgacgttgacgcagcgtcagtcg
gtgttgcaggccttcctgcatgaccaaaacgtgcgcgtcattctcatctccctgaaggca
ggcggagagggtttgaacctgcaggtggccaatcacgtggtgctgactgatccgtggtgg
aacccagcggttgagatgcaggccgtacagcgagcgcaccgaatcgggcagacccgcccg
gttcacgccgtccgctttgtcacggagcactcagtggaggagcgcatggtcgacctgcag
gacaagaagatgctcgttttcgagggcaccattgacggcaagctgcagtcgctcaacaag
ctcaccgaggaggatctgcagttcctctttacaaggtag
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