Leishmania major: LMJF_36_1000
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Entry
LMJF_36_1000 CDS
T01014
Name
(RefSeq) hypothetical protein
KO
K19656
intraflagellar transport protein 122
Organism
lma
Leishmania major
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lma03037
]
LMJF_36_1000
Cilium and associated proteins [BR:
lma03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
LMJF_36_1000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_IFT122_2nd
Beta-prop_IFT122_1st
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
ANAPC4_WD40
TPR_IF140-IFT172
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
TPR_GEMI5
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WDR55
NBCH_WD40
TPR_ELP1
TPR_COPA_B
Beta-prop_WDR35_TULP_N
Clathrin
Beta-prop_IFT140_1st
TPR_IFT80_172
Beta-prop_Vps41
Zn_ribbon_IFT122
Nic96
Beta-prop_NWD2_C
Beta-prop_SPT8
Beta-prop_WDR75_1st
DUF2802
Motif
Other DBs
NCBI-GeneID:
5655350
NCBI-ProteinID:
XP_001686672
UniProt:
Q4Q1X6
LinkDB
All DBs
Position
36:385855..389745
Genome browser
AA seq
1296 aa
AA seq
DB search
MRTSVRWSETADAVKGIRPPINSLCYSPSGDYVVAACGVRVLVYAASTGTLLHSLKGHQN
TIYCVDYASDGKCFASGGADRTVIVWSNKGEGVVKYQHKESIQALAHNPSSSHLASVSST
DWGIWSPDKPKVSKYSLPSKGLCAAWTPSGKTLAIGLLNGTIMLMDKNGDETVLICRPAP
VWTLAFTPLREKGIDVLAVGSWDQRLSFYNLSGTPVGRERELDFDPCSLSYFNDGEYILL
SGSDHKVTLFTNDGNRLIEVAGAGDWIWSARQRPRHKQLCYGTNDGTISCIDIAITTVHA
IHDDQYVCRKDMTNLVVHQLLLDRKMVIPCNEYVHKIATFLDRLAVQLQERVIVFEFFYD
DERNMRYQDIAQIRRRLECSLLCVTTRAIVVCNDRRITMYDFQGSKRREWSMGSAVQFMK
VAGGMEGREILLVGLKGGQVMKVFVDNPFPTLLHKGSAPVKSADFSSSRSRLAVIDSTNT
LQVLRLGEKNELLFSEDNVTAVAFNVDLEDSIAFTTGDNMLHIKTGSLPAYQQAVRGLVV
GFKANRVFNLHYSNVMVLDVPHAHALYKYVEMRDLDLAYNVACLGVADADWKMLGLHAMS
QLRLDIARKAFTHIQDVKLVELLKSLELRRRQSRVEDGVSPTARNGSATSATVAAATDKG
DVGPGGESAEARAAAKDSVLYGSILAFQGKYHDAARQFMKAGCELKAVEMYCDLKMWDNA
KKICTNEKVLKDLIRQQARWAEDSQNFIEAASLYESCGDYAKAIGMMGQAGQVKKLMKMC
RSLPKSEVTLITECANFFRKHNAIPFAIEAYEKVQDHQALIGIYVARADWRNAFTILEKA
PTLAREVYVPWASWLAENDKFDEALEAFRAAKWPKEAMRLMETLATNSVTCRKFRDAAFY
YIHLAEEYGRFEDGETPTDVEKAARIRRGKECVRRADIYYAFSSVYAHTTQPLPYNELSL
FRAAKYLFGMCAECAIPMNVGKGAILYTLSRIANRLEMVRTARAVFEKLQGVILPVSMME
QVDIETLIVRSKPVKDREELLDRCFRCNQLLAQLPMAGDRCPNCFHQCVRSFVNFECLPL
VEFILADDLADEEAERIIVSGVGRRKSADDEHNNGQRDAADAKALPKAKEWQSDSGANVI
SFDDGNIDYEIDQQLVAMGRSKAAANKGNDPFFTQLQYVLRPGRPTAVYQPFVASADILK
GFRRDEVFIVRPRYGTLPVPNRYYRLMRSDVNVCLCNGCQHFFIAEDYEAECTKGSGCPL
CRYRPGKQVSRSMKQILFDMEAAAAVATTSSSPAAL
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacaagcgttcgatggtcggagacggcggatgcggtaaagggtatccgtcccccc
atcaacagcctctgctacagcccgtccggggactatgtggtggcggcgtgcggcgtgcgt
gtgctggtgtacgccgcatccacaggcaccctcttacactcgctgaagggtcaccagaac
acgatctactgcgtagattacgcgtctgatggaaagtgcttcgccagcggcggggcggat
cggacggtcattgtgtggtcgaacaagggtgagggcgttgtgaagtaccagcacaaggag
tccatccaggccctggcgcacaaccccagctcctcgcatttggcgtccgtgtcgagcact
gactggggcatctggtcgccagataagccgaaagtctccaagtactcgcttccgtcaaaa
gggttatgtgcagcttggacgcccagtggcaaaacactggcgatcggcttgctgaatggc
accatcatgctgatggacaagaatggcgacgagacggtcctcatttgccgaccagcgcct
gtctggactctcgcctttacgccgctgcgagagaaaggcatcgacgtgcttgcagtcggc
tcgtgggatcagcggctgtccttttacaacctttcgggcacacctgtcgggcgagagcgg
gagctcgactttgacccgtgcagtctgtcgtacttcaatgacggcgagtacatcctgctc
agcggcagcgaccataaggtgaccctcttcacgaacgatggaaaccgactcattgaagtc
gccggcgcgggtgactggatttggtctgcgcggcagcggccgcgacacaagcagctctgc
tacggcaccaacgacggcaccataagctgcatcgacatcgccatcaccaccgtccacgcc
atccacgatgaccagtacgtgtgtcgcaaggacatgacgaacttagtcgtgcatcagctc
ttgcttgatcgtaaaatggtgataccatgcaacgagtatgtgcacaagatcgccaccttt
cttgatcgactcgcagtacagttgcaggagcgtgtcatcgtctttgagttcttttacgac
gacgagcgtaacatgcgctatcaggacatcgcgcagattcgccgtcgcctcgagtgctcg
ctgctgtgtgtaacaacgagagccattgttgtgtgcaacgacaggcgtattacgatgtac
gacttccaggggagcaagcggcgggagtggtcgatggggagcgccgtgcagtttatgaag
gtcgcgggtgggatggagggacgagagattctgctcgtcgggctgaagggtggccaagtg
atgaaggtgtttgtcgacaaccctttccccaccctgttgcacaagggcagcgcaccagtc
aagagcgcggacttcagcagctcgcgcagccgcctcgccgttatcgacagcaccaacacc
ctccaggtcttgaggctaggcgaaaagaatgagctgctcttttccgaggacaacgtcacg
gcggtggcgtttaacgtcgacttggaggacagtatcgcatttacgactggcgacaatatg
ctgcacattaagacaggctcgctgccagcgtaccagcaagcggtgcgcggcctcgtcgtt
ggtttcaaggcaaaccgcgtcttcaaccttcattactccaacgtgatggtgctcgacgtg
ccgcacgcacacgcgctgtacaagtatgtagaaatgcgagacctcgacctagcctacaat
gtcgcctgtctcggcgtggccgacgccgactggaagatgctgggactgcacgcgatgagc
cagctgcgtctcgacatcgcgcgcaaggcctttacgcacatccaggacgtgaagctcgtc
gagttgctgaagtcgctggagctgcggcgccgccaatcgagagtcgaggacggggtgtcg
ccgacggcacgaaacggcagtgccacctccgccacggtggcagcggcgacggacaagggc
gacgtcggtcctggcggcgagtccgcggaggcgcgcgcggcggcaaaggatagcgtgctg
tacggcagcatccttgccttccagggcaaataccacgatgcggcacggcaattcatgaag
gccggctgcgagctgaaggcggtggagatgtactgcgacctaaaaatgtgggacaatgcg
aagaagatctgcacaaacgagaaggtgctcaaggatctaattcggcagcaggcgcgctgg
gccgaggactcgcagaacttcatcgaggccgcctcgctctacgagagctgcggagactac
gcgaaggcgatcggcatgatgggccaggcaggccaggtgaagaagttgatgaagatgtgc
cgcagcctgcctaagtcggaggtcaccctcataaccgagtgcgccaatttctttcgcaaa
cacaacgccatcccgttcgccatcgaggcgtatgagaaggtgcaggaccaccaagctctt
atcgggatctacgtcgcccgcgccgactggcgcaacgccttcaccatcctggagaaggca
ccgaccctagcgcgcgaggtgtacgtgccatgggcaagttggctggccgaaaacgacaag
ttcgacgaggccttggaggcgttccgggcggcgaaatggccgaaggaggcgatgcgcctc
atggaaacgctcgcgacaaacagcgtcacgtgtcgcaagttccgtgacgccgccttctac
tacattcatctggccgaggagtacgggcgcttcgaagacggcgagacgcctactgacgtg
gagaaggcggcgcgaatccgccgcggcaaggagtgtgttcgccgtgccgacatctactac
gccttctcgagcgtctacgcccacaccacgcaaccgctaccgtacaacgagctcagcctc
tttcgggcagccaagtacctcttcggcatgtgtgccgagtgcgccattcccatgaacgtc
ggcaagggtgccattctctacaccctttcccgcatcgccaatcggctagagatggtgcgc
acggcgcgcgctgtgttcgagaagctgcagggcgtgattcttccggtgtccatgatggag
caggtggacatcgagacgctcattgtgcgcagcaagccggtaaaggaccgcgaggagctg
ctggaccggtgcttccgctgcaaccagcttcttgcgcagctgccgatggctggggatcgc
tgtcccaactgcttccaccaatgtgtccgctccttcgtcaactttgaatgtctgccgctg
gtcgagttcattctcgccgacgacctcgccgacgaggaggcggagcggatcatcgtctcc
ggcgttggtcggcgaaagtcggcagacgatgagcacaacaatgggcagagagacgcggcg
gatgcgaaggcgttgccgaaggcgaaggagtggcagtcggacagcggcgcaaacgtcatc
agcttcgacgatggcaacatcgactacgaaatcgatcagcagctggtcgcgatgggccgc
tccaaggcggcggcgaacaagggcaatgaccccttctttacgcagttgcagtacgtgctg
cggcccggccgccccaccgcggtgtaccagccgtttgtcgcgtcggcggacatcctgaag
ggattccgccgcgacgaggtgttcattgtgcgaccgagatacggcacgctgcccgtgcca
aaccgctactaccgcctgatgcgctccgacgtgaatgtgtgcctgtgcaacggctgccag
cacttcttcattgcagaagattacgaggcggagtgcacgaaaggcagcggctgtccactc
tgccgctaccgtcccgggaagcaagtgagccgctcgatgaaacagattctgttcgacatg
gaggccgccgctgcggtggcgacgacttcaagctcgccggcagctctgtga
DBGET
integrated database retrieval system
