Candidatus Lucifugimonas marina: GKN94_07055
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Entry
GKN94_07055 CDS
T10105
Name
(GenBank) molybdopterin-dependent oxidoreductase
KO
K05299
formate dehydrogenase (NADP+) alpha subunit [EC:
1.17.1.10
]
Organism
lmaj Candidatus Lucifugimonas marina
Pathway
lmaj00680
Methane metabolism
lmaj00720
Other carbon fixation pathways
lmaj01100
Metabolic pathways
lmaj01120
Microbial metabolism in diverse environments
lmaj01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
lmaj00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
GKN94_07055
00680 Methane metabolism
GKN94_07055
Enzymes [BR:
lmaj01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.10 formate dehydrogenase (NADP+)
GKN94_07055
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Fer2_4
Molybdop_Fe4S4
Fer4_Nqo3
NADH-G_4Fe-4S_3
Molydop_binding
Fer4_7
Fer4
Fer4_9
Fer4_21
PUA
Fer4_10
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
WFG35459
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Position
complement(1546102..1548783)
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AA seq
893 aa
AA seq
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MADGTTFKIDGRDVVAKPGQTILQAAMDQDIYIPYLCYYPKMKPQGSCRACMVEVEANGR
KMMVASCTTPPMPEAEVTTNSEEVEGLRRNVVELLMSEHPHGCLTCHRIELCGPQDICQR
HVTVTDRCTICPKNERCELKDTVRAVELDLRTPLNYHRRDLPIHSDDPFYDRDYNLCIVC
SRCVRVCDEVRFDTALTLTSRSGVALVGTSHGTSLLESGCEFCGACVDVCPTGSLTERNY
KWEKAVSEVATVCTNCPVGCQMIAEVNKFGKVVRFKADLAGAANNGQACMTGKFGYEYTN
DSSRLKRPYVREGGILRKATWDEALEKIKSGLGGRSSEELAVITSPRGSNEDQYVAAKFA
KSVLKTANIDSALNADNALLSRLEARLGAGAATNPIWDLENSKSLLVVAGNPTEEQNVLA
VPAKKAVREGAKLVVIDSRETELTRYATEWLRPKPGSEALLIAGISRVILDEALEDKEFV
GSRLDQAEELKQSLWTFDLAKVSRDTGIEDAQIRRAARIFAESDAGAILLGDDGLTDKAA
ELVVDASIDLAAITGNLGKASGGIFPLYRGANTLGARDMGATPGENGRDIAEMMSGMTSG
DVKAALVMADGVSGYSPTLSSLPAALENLDFLVVSAALDSEITHHANVVLPAATYAEQNS
SLTNVERRVQLLRITAEPKHEEKTGWETVAAIANAMGGTGFDYATASDVFTEIAQEVSNY
SGLNYERLQSGGIQWPVDSSILFSDEASKVTVVALNYDELANSAESGSLTFAPGRVLSQP
ERDVVVRKPADMNYVDREQFVQVHPDDAKSAGLNEGDVIQVKTDDGHILARGKAVFDSPQ
VGLVGATTLFGELATKMHELDVADWTPQMPGLGYSTVTLESAPVEQEAGAAAD
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggaacaaccttcaagatcgatggccgcgacgtagtcgcaaaacctggccag
acgattctgcaggcggcaatggatcaggatatttacattccttacctttgctactacccg
aagatgaagccgcaaggctcctgccgggcttgcatggttgaagtcgaagcgaacggtcgg
aagatgatggtcgcttcttgcaccactccaccgatgccagaagctgaagtcaccacgaac
agtgaagaagtcgaaggcctccgacgtaacgttgttgaactcctgatgagtgagcacccg
catggatgtctcacctgtcaccgcatcgagctttgtggtccacaggacatttgtcagcgt
cacgtaacggttacagaccgttgcactatttgccctaagaacgagcgatgtgaacttaag
gacactgtacgagcggttgaactcgaccttcgcacacctttgaattatcaccggcgcgat
ctgccgattcactcggatgatccgttctacgaccgcgactacaacctctgcattgtctgt
tcacgctgtgttcgagtatgtgacgaagtccgattcgatactgctctgacactcacttca
cgatcaggcgtcgctctggtcggaacttctcatggcacatcgctgcttgaatcaggatgt
gaattctgtggagcgtgtgtagatgtttgcccaactggttctctcaccgagcggaactac
aaatgggagaaggctgtcagtgaagtagcaactgtttgcacgaactgtcctgtcggctgc
cagatgatcgctgaagtgaacaagttcggcaaagttgttcggttcaaagccgatctcgct
ggagccgccaacaatggacaagcctgcatgacaggtaagttcggatatgagtacacgaac
gatagttcacgcttgaagcgtccttatgttcgtgaaggcggaatactgcgtaaggccact
tgggacgaagcgcttgagaagatcaagtctggtcttggcggccgttcatctgaagaactg
gcggttattacttcacctcgaggttcgaatgaagatcagtacgtcgctgcaaaatttgca
aaatcagttctgaagactgcaaatatcgactctgctctgaatgccgacaacgctctgctt
tctcgcttagaagctcgattgggcgctggtgcggcaacgaacccgatctgggaccttgag
aactctaagagccttttggttgttgctggtaacccaaccgaagaacagaacgttcttgct
gttcctgccaagaaggccgttcgagagggtgccaagctagtagtgatcgactcacgagaa
actgagttgactcgatacgcaacggaatggcttcgacctaagccgggatctgaagcactc
ctgatagccggtattagccgggtgattctcgacgaagctctcgaagacaaagaatttgtt
ggttcacgcctcgatcaggctgaagaactgaaacagtcgttgtggacatttgatctggcg
aaggtttcccgagacaccggtatcgaagacgcacagatccgtcgtgcagccagaatattt
gctgaaagtgacgcaggagcaattttgctcggtgacgatggtcttactgataaagccgct
gaattagttgtcgacgcatcgatcgatctcgctgctattactggcaacctcggtaaggca
tcgggcggaatcttcccgttataccggggtgctaacacgctgggtgcccgagacatgggg
gctactccgggagagaacggacgagacatagcggagatgatgtctggaatgacgtctggt
gacgtcaaagcagcactggtaatggctgatggagtgtctgggtactctccaacactaagc
tcgctacctgccgctctggagaatctagatttcctcgtagtatctgcagcactggattcc
gagatcactcatcacgcaaacgtcgtgttgccggcagctacgtacgccgagcagaactca
tcgttaactaatgtggaacgaagagttcagcttcttcgaattactgcagagcctaagcac
gaagagaaaacaggctgggaaaccgtcgcagcgatagcaaacgctatgggcggcactgga
ttcgactacgcaactgcatcagatgtgttcactgagatcgctcaggaagtatctaactac
agcggattgaactacgaacgacttcagtcgggcggaattcagtggccggtagattcttcc
atccttttctcggacgaagcatctaaagttacagtcgtcgccctcaactacgatgaactg
gcgaactctgccgaaagcggatcgctgacatttgccccagggcgagtgcttagccaaccc
gaacgcgatgtagttgttcgaaagcctgcagatatgaactatgtcgaccgtgaacagttc
gttcaggttcaccctgatgacgcaaaatcggctggattgaacgaaggtgacgtgattcag
gtcaagaccgacgatggccacatactggcacgcggtaaggcagtgttcgattcaccgcag
gttggtctagtcggggctacgaccctgtttggcgaactagcgacaaagatgcatgaacta
gacgtagcagattggacgcctcagatgccaggtttggggtattcaacagttacactagaa
tcagcacctgttgagcaagaagcaggcgccgcggccgactaa
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