Leishmania martiniquensis: 92513802
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Entry
92513802 CDS
T10333
Symbol
LSCM1_03757
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
lmat Leishmania martiniquensis
Pathway
lmat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
92513802 (LSCM1_03757)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmat03019
]
92513802 (LSCM1_03757)
Messenger RNA biogenesis [BR:
lmat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
92513802 (LSCM1_03757)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_16
RsgA_GTPase
AAA_23
AAA_15
MMR_HSR1
AAA_24
Dynamin_N
AAA_33
MeaB
AAA_25
FtsK_SpoIIIE
nSTAND3
ATP-synt_ab
AAA_22
AAA_28
Zeta_toxin
NACHT
AAA_18
G-alpha
SRP54
AAA_7
DLIC
Motif
Other DBs
NCBI-GeneID:
92513802
NCBI-ProteinID:
XP_067176658
UniProt:
A0A836KNK1
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All DBs
Position
30:454998..456566
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AA seq
522 aa
AA seq
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MSREIIVEVRGVSFQYPGAPTASLRQVSLTTHRGDRVLVIGHNGSGKSTLLSLLAGRRKA
KSGSVRVLGRDPFEDTSMIQHISMIGAPWPPEAVFGNTVDRVASPAPVPERKTMVADALH
LRLSRFVEKMSSGEKRRVQILHGMLNPATVYLLDECSTDIDVAERRTVLKLVRQECEARD
GCCFYATHILDRSQDWATHLLLMEEGRVVAFKRVADIAVPLEEYAFQFMRKRDRCARGVD
AAAPPSYGKFVSLSPGSSAWATTTALAPPYSAISDAPATYWPKGKRDGGPDEVVIDCTRL
SYKDVFVHLTFQVNRGERVLLCGSNGSGKSTLLNMLGGRLYFDNRDGSLSVLGKRCYDGM
LLNGLVSYGGDWWAAAPGGEMHVREMLQLQTARAEHLRALLNVDMDWDVRRISTGEQKRV
QLLLHLLDDKPIVLLDEATADLDVDQRHSLLQFLYEESVQRGVTVVYSTNIFGGLEGWAD
AVVLLDRTVRGAHAVWRASQGQPISLERVADEIIALKEREVF
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggagatcatcgtggaggtgaggggtgtctccttccagtaccctggtgcgcct
acggcctcgttgaggcaggtgagcctcacgacccatcgcggggatcgtgttctcgtgatt
gggcacaacggaagcggcaagtcaacactgctatctcttctggcaggtcgacgaaaagca
aaatcagggagcgtgcgtgtgctcggacgcgacccgtttgaggacacgagcatgatccag
cacatatccatgatcggtgcgccatggcccccagaggcggtgttcggtaacacggtcgat
cgcgtagcctcgccggcgccagtgccggagcgtaaaacaatggtcgcagacgcgctgcat
ctacgcctctcccgcttcgtggaaaagatgagctcgggagagaagagaagggtgcagatc
ctgcatgggatgctgaacccagccaccgtgtaccttctcgacgagtgtagcaccgacatc
gacgtcgccgagcgacgcacggtgctgaagctggtacgacaagaatgcgaggcgagagac
gggtgctgcttttatgcgacgcatattctcgaccgaagccaggactgggctacgcacctg
ctgctcatggaggagggccgtgtggttgccttcaagagggtggcagacatcgccgtgccc
ttggaagagtatgcgttccagttcatgaggaagcgcgaccgctgcgctcgcggcgtcgac
gccgccgccccaccgtcgtatgggaagttcgtctccctgtcacctggatcgtccgcgtgg
gcaacgacaaccgcacttgcccccccatactcagcgatatccgacgcgccggcgacgtac
tggccgaaagggaaaagagacggtgggcccgacgaagtggtcatcgactgcacacgccta
agctacaaggatgtgtttgtgcacctgacatttcaggtgaaccgtggtgagcgggtgctg
ctgtgcggcagtaacggctccggcaagtccaccttgctcaacatgctgggcgggaggctg
tacttcgacaaccgcgacgggtccctctctgtactgggtaagcggtgctacgatggcatg
ctgcttaacggtcttgtcagctacggcggtgattggtgggccgccgcgcctggcggagag
atgcatgtgcgcgaaatgctgcagctccaaaccgcccgtgccgagcacttgcgcgcgttg
ctcaacgtggacatggactgggatgtgcggcgcatcagcacgggagagcagaagcgtgtg
cagctgctcttacacttgctggatgacaagcctatcgtactgcttgatgaggcgaccgcc
gacctggacgtcgatcagcgccacagcctcctgcagttcctctacgaagagagcgtgcag
cgtggggtgactgtcgtctactcgacgaacattttcgggggcttggagggctgggccgat
gccgtggtgcttctggaccggactgtgcgcggtgctcacgctgtgtggagagcctctcag
gggcagcccatctcactggagcgcgttgccgatgaaattatcgcacttaaggagcgggaa
gttttttga
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