Leisingera methylohalidivorans: METH_12550
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Entry
METH_12550 CDS
T02961
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
lmd
Leisingera methylohalidivorans
Pathway
lmd00300
Lysine biosynthesis
lmd00550
Peptidoglycan biosynthesis
lmd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
METH_12550
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
METH_12550
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lmd01011
]
METH_12550
Enzymes [BR:
lmd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
METH_12550
Peptidoglycan biosynthesis and degradation proteins [BR:
lmd01011
]
Precursor biosynthesis
Amino acid ligase
METH_12550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
AHD01401
UniProt:
V9VRN1
LinkDB
All DBs
Position
complement(2416581..2418068)
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AA seq
495 aa
AA seq
DB search
MSSSRPDQPLSQLGLTARGGADPQISGLAVDSREVRQGYLFAALPGSQVHGAKFIPAALE
LGASAILTDTAGAGIAARILDESHAALVVVEDPRQTLAYAAALWFGGQPQTVVAVTGTNG
KTSVASFVRQIWMELGHQAVNMGTTGIEGAWSYPLAHTTPEPITLHRALAEAAAAGVTHA
AMEASSHGLDQRRLDGVQLAAAGFTNFTQDHLDYHETFDAYFAAKAGLFRRVLPEEGIAV
INMNDPRGSEMRAVAAARGQEVISVGRGLGDLSLMGLRYDGTGQDMRFSWHDEPYQLRLN
LIGGFQAENVLLACGLVIAGGEDPERVFETLPHLTTVRGRMQLAAERDNGSAVFVDYAHT
PDAVASAIKALRPHVLGRLIAIVGAGGDRDITKRPLMGQAAHENADVVIVTDDNPRSEDP
AVIRAAVKGGAPGCIEVGDRAEAILRGADLLGPGDALIICGKGHETGQTVGDTVLPFDDV
EQASIAAAALDGRIA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagcagaccagaccagcccctgagccaattggggctgaccgcccgcggcggt
gccgacccgcagatcagcggattggcagtggacagccgcgaggtgcggcaggggtatctt
tttgcggcgttgccgggcagtcaggtgcatggggccaaattcatccccgcggcgctggaa
ctgggcgcctccgccattctgaccgataccgcgggcgccgggatcgccgccaggattctg
gacgaaagccacgccgcgctggtggtggtggaggacccgcgccagacgctggcctacgcc
gcggcgctgtggttcggcggccagccgcagaccgtggttgcggtcaccggcaccaacggc
aagacatcggtggcaagctttgtgcgccagatctggatggagctcggccatcaggccgtc
aatatgggcaccaccggtatcgagggcgcctggagctacccgctggcgcataccacgccg
gagccgatcaccctgcaccgcgcgctggctgaggccgccgcagcaggggtgacccatgcg
gcgatggaggcctcctcgcacgggctggaccagcgccgtctggacggggtgcagctggcg
gcggcaggctttaccaacttcacccaggaccatctggattatcacgagacctttgacgcc
tatttcgccgccaaggcgggcctgttccgccgggtgctgccggaggaaggcattgcggtg
atcaacatgaatgacccgcgcgggtccgagatgcgcgccgtggctgccgcccgcgggcag
gaagtgatcagcgtgggccggggccttggcgatctcagcctgatgggtctgcgctatgac
ggcaccggccaggatatgcggttttcctggcacgacgagccctatcagctgcgcctgaac
ctgatcggcggttttcaggcggaaaatgtgctgctggcctgcgggctggtgattgccggc
ggcgaggacccggagcgggtgtttgaaaccctgccgcatctgaccacggtgcgcggccgg
atgcagctggcggcagagcgggacaacggctcggccgtgtttgtcgattacgcccatacg
ccggatgctgttgccagtgccatcaaggcgctgcgcccgcatgtgctgggccggctgatt
gccatcgtcggcgcaggcggcgaccgcgacatcaccaaacgcccgctgatggggcaggcg
gcgcatgaaaatgccgatgtggtgatcgtgacggacgacaacccgcgcagtgaggacccg
gcggtgatccgcgccgcggtgaagggcggcgcccccggttgcatcgaggtcggcgaccgc
gccgaggcgatcctgcgcggggctgacttgctggggccgggcgatgcgctgatcatctgc
ggcaaggggcatgagaccggccagaccgtgggcgacacggtgctgccgtttgacgatgtg
gaacaggccagcattgctgcggccgcgctggacgggaggatcgcatga
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