Listeria monocytogenes HCC23 (serotype 4a): LMHCC_0663
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Entry
LMHCC_0663 CDS
T00801
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lmh
Listeria monocytogenes HCC23 (serotype 4a)
Pathway
lmh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMHCC_0663 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmh03400
]
LMHCC_0663 (nth)
Enzymes [BR:
lmh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LMHCC_0663 (nth)
DNA repair and recombination proteins [BR:
lmh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LMHCC_0663 (nth)
Prokaryotic type
LMHCC_0663 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
EndIII_4Fe-2S
HHH_8
RecR_HhH
CrtO
Motif
Other DBs
NCBI-ProteinID:
ACK39018
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All DBs
Position
674815..675474
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AA seq
219 aa
AA seq
DB search
MLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYH
SPEDYLAVPLEELMDDIRSIGLYRNKAKNIQGLSEKILTEFNGEVPRTHAELESLPGVGR
KTANVVLSVGFDIPAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPKELWSDAHHY
MIFFGRYHCKARNPECPTCPLLYLCREGKKQAKVRGFDG
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
ttgttatcaaataaacaaaccgtattatgcatagaagaaatggccaaaatgtttccggca
gcacactgcgaactagttcataaaaatacgtttgaattactggtagctgttgtattatca
gcacagtgcacagatgttttagtaaaccgcgtgactgcctctctttttgaaaaatatcac
tctccagaagattatttagctgttccactagaagaattgatggatgacattcgctccatt
ggtttatatcgtaataaagctaaaaatatccaaggcctatccgagaaaattttaacagaa
tttaatggggaggttccgcggacgcatgcggaactggagagcttacctggtgtagggaga
aagacggccaatgtagttttatccgttggttttgacattcctgcaattgcagtagacacg
catgtagagcgaattagtaaacgtttagggatttgtagatggaaagattctgttgtggaa
gtagaagaaacgttgaaaagaaaattaccaaaagagctttggtcagatgctcatcactat
atgattttctttggaagatatcattgtaaggcaagaaatccagaatgcccgacctgtcct
ttactttatttatgtagagaaggaaaaaaacaagcgaaagtgaggggattcgatggctga
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