Larus michahellis (yellow-legged gull): 141732558
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Entry
141732558 CDS
T11135
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
141732558 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmic03400
]
141732558 (LIG4)
Enzymes [BR:
lmic01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
141732558 (LIG4)
DNA repair and recombination proteins [BR:
lmic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
141732558 (LIG4)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141732558
NCBI-ProteinID:
XP_074417831
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Position
1:159408386..159412628
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AA seq
912 aa
AA seq
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MASAPASQPSPKKTVASHVPFADLCSTLERIQTCKSRPEKTKYFKDFLDSWRKFHDALHQ
KEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAAKLLNYRTP
AGSRGDAGDFAMIAYFVLKPRSPKQGRLTIEQVNEHLDAIASNNTAKNKGMLKKSLLQLI
TQSTALEQKWLIRMIIKDLKLGVSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPSVSL
SDVSIMLFSAFKPMLAAIADVQQIEKQMNNQVFYIETKLDGERMQMHKDGDVYKYFSRNG
FDYTQQFGASPLDGSLTPFIHNVFKSNIQNCILDGEMMAYNPETQTFMQKGNKFDIKRMV
EDSDLQTCFCVFDVLMVNDQKLGHEVLSKRYEILSSVFTPVAGRIHVVQKKSARTRKEVI
DALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGS
RGGMMSHFLCAIAETPPPNEKPTVFHTICRVGSGYTMKELYDLGLKLAKHWKPYNRKDPP
CNILCGTEKPEMYIEPCNSVIVQIKAAEIVNSDMYKTDCTLRFPRIEKIREDKEWYECMT
SDMLEDLRSKAEGKLASKHLHIDEYDEPQEKKRKTISKVKRIIGIAEQFKAPDLSTVNKV
SNVFEDVEFCVMTGMGKYSKSYLESRIAEYGGSVVQNPGPETYCVIVGAENVRVKNIIAS
NKYDVVRAEWLLQCFQTKMLVPWQPAFMIHMSPDTKEHFAREYDCYGDSYTADTDVAQLK
EVFSRMEDSKLVPLDVIAELEERYSWNSCQLSIFRGNTIYVDCYAVVNEPRTKIRGTTLS
IRALELRFYGAKVASHLEEGVSHVIIGEDHSRVKEIKALRRTFGKKFKIVSELWVKQSVE
EGVPKDENQYLV
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgcaccggcttcacaaccttctccaaaaaagacagtggcctctcacgtgccc
tttgcggatctgtgttctactctggagcgaatccagacgtgtaagtctcgtccagagaaa
accaagtatttcaaggatttcctggattcctggagaaaattccatgatgcgcttcatcag
aaagagaaagacgtcacggattctttttatccagctatgcgacttattcttccacagctg
gaaagagaaaggatggcatatggaattaaagaaactatgcttgcgaagctgtatattgaa
ctgcttaatttgccaaaagatggaaaagatgctgcaaagcttttaaattacagaacacct
gctggctcacgtggagatgctggagattttgcaatgatcgcatactttgtgttaaaacct
aggagcccaaaacaaggcagactgacaatagaacaagtcaacgaacacttagatgcaata
gctagtaataatactgcgaaaaacaagggaatgttaaagaaaagtcttcttcagttaatt
acccagagcacagcactggaacaaaagtggctcatccgcatgattataaaggatctaaag
cttggtgttagtcaacaaacgatattttccatttttcatcctgatgctgctgaattacac
aatgtcacaactgatttggaaaaagtttgcagacaactgcatgatccctctgtctcactt
agtgatgtttctatcatgttgttttctgcctttaaaccgatgcttgctgctattgctgat
gtccagcaaattgagaagcaaatgaataaccaggtattctacatagaaactaagctggac
ggtgagcgtatgcagatgcacaaagatggagacgtgtataaatatttttcccgaaatggg
tttgactatactcagcagtttggtgcttccccccttgatggttcattaacgccatttatt
cataacgtatttaagagcaatatacaaaattgcattcttgatggtgaaatgatggcttac
aatcctgagactcaaacctttatgcaaaaaggaaacaaatttgacataaaaagaatggtg
gaggactctgatctgcagacctgcttctgtgtgttcgatgtattgatggttaacgatcag
aagttgggtcatgaagtactaagcaaaagatatgaaatcttaagtagcgtatttacccca
gtagcaggcaggatccatgttgtacagaaaaaaagtgccagaacaagaaaagaagtaatt
gatgctttaaatgaagcaatagataacagagaagaagggattatggtgaaagatcccatg
tccacctacaagcctgacaaacgaggggaaggctggttaaaaatcaagccagaatatgtc
aatgggctaatggatgaactagaccttttaattgttggcggttactgggggaagggctca
cgtggtggaatgatgtctcattttctgtgtgcgattgcagagacgccccctccaaatgaa
aaacctaccgttttccacactatttgtcgtgttggctctggctatactatgaaggaattg
tatgatctaggtttgaaactggctaaacactggaagccatacaataggaaggaccctccc
tgtaacattttgtgtggaactgaaaaaccagaaatgtacattgaaccttgcaactctgtc
atagtccagatcaaggcagccgagattgttaacagtgatatgtacaaaactgactgtact
ttgagattcccccgaattgagaagataagagaggacaaagagtggtacgagtgcatgact
tcagacatgttagaagatctccgaagcaaagcagaagggaagctggcatctaagcacctt
catatagatgagtatgatgagccacaagagaaaaaaaggaaaactatatcaaaggtgaag
aggataattggaatagctgagcagtttaaagctcctgatctttctactgtaaacaaggtt
tcaaatgtatttgaagatgttgagttttgtgttatgacaggaatgggaaaatactcaaag
tcgtacctggaaagcagaatagccgaatatggtggcagcgtggtacagaacccggggcca
gagacttactgtgtcattgtaggagctgagaatgtcagagtgaaaaacatcattgcttcc
aacaaatatgatgtggtgagggcagagtggctccttcagtgttttcaaaccaaaatgctg
gtgccttggcagccagcctttatgattcacatgtctcctgacacaaaagaacattttgct
cgtgagtatgattgttatggagacagctacacagcagacacagatgttgcacaactcaag
gaagtgttctcaagaatggaagacagtaagttggtacctttggatgtgattgcagagtta
gaagaacgttattcatggaacagctgtcagctcagtatattcagaggaaacactatttat
gtggactgttatgctgttgttaatgagcccagaacgaaaatccgtggaacaacactatcg
attagagctttggagctccgtttttatggtgcaaaagtagcctctcaccttgaagagggt
gtctcccatgttattataggagaagatcattcccgggtaaaagagattaaagcactcagg
agaacatttgggaaaaaatttaaaatcgtatctgagctgtgggtaaaacaatcagtggag
gaaggagtcccaaaggatgaaaatcagtacttagtttaa
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