Larus michahellis (yellow-legged gull): 141732732
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Entry
141732732 CDS
T11135
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic03440
Homologous recombination
lmic03460
Fanconi anemia pathway
lmic04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141732732 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
141732732 (BRCA1)
03460 Fanconi anemia pathway
141732732 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmic01009
]
141732732 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmic04121
]
141732732 (BRCA1)
03036 Chromosome and associated proteins [BR:
lmic03036
]
141732732 (BRCA1)
03400 DNA repair and recombination proteins [BR:
lmic03400
]
141732732 (BRCA1)
Enzymes [BR:
lmic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141732732 (BRCA1)
Protein phosphatases and associated proteins [BR:
lmic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141732732 (BRCA1)
Ubiquitin system [BR:
lmic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141732732 (BRCA1)
Multi subunit type E3
BRCC complex
141732732 (BRCA1)
Chromosome and associated proteins [BR:
lmic03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
141732732 (BRCA1)
DNA repair and recombination proteins [BR:
lmic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
141732732 (BRCA1)
BRCA1-A complex
141732732 (BRCA1)
BRCA1-B complex
141732732 (BRCA1)
BRCA1-C complex
141732732 (BRCA1)
BRCA complex
141732732 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
141732732 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
BRCT_2
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_6
zf-Nse
zf-RING_5
BRCT_3
zf-RING_10
zf-MIZ
Zf_2nd_IFT121
zf-ANAPC11
RTT107_BRCT_5
zf-RING_4
UvrB
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
141732732
NCBI-ProteinID:
XP_074418149
LinkDB
All DBs
Position
18:complement(3189894..3214912)
Genome browser
AA seq
1866 aa
AA seq
DB search
MDFSVIAIGDVQNVLSAMQKNLECPICLDVVKEPVSTKCDHIFCRFCMFKLLSKKKKGVT
QCPLCKTEVTKRSLKENSRFKQLIEGLLETIHAFELDTGVKFLNSHHFPKTSTEATVAEF
LCKESSVIQSKGFRNRKKNAKENGQENCTLQEANVDTRLTDTRVKRCSLRNKTQKCASEK
GVYIEFGSDSSEELFKQASNTGLEDKEALQISSQEKLEELKSAEKGNEYSCNTQPDKLGA
EEVILPNVRGESDFSKEGLNKKSTRSITEYAKPGQVNMTEYRSSPLNVLAVDLLTEQCDR
IGNASPLSNRDTSFFKHTEEMAAEQTQCNTESKEFDLKDSSKSRLDKSKEIDTVVQSVEA
VEMHEPENDSAHEKEPPLEKLLQPETLHCATVNQVSRKRLKRSIQKVNEWFSKSNETLSS
SSSQDDSAGATDVSGEGDTCLSDKDSCISEKTDPMVDSMEIAVVEGNKRRSKQTADSIKD
KIFGKTYKRERRSNAPIILRDILPTTKKEEVTVDKKCLNNSSKGGLKRKRKTARVLQPED
FIQKKDTEEAGGCPQSVNRCLEDAEKKRCDESSAVSESHFSENGEDNAPAETEEGGGGSI
WKKATEKVTGKHCDRELELNSSDQKSTKKSSAAKKCRRSTRTMCALQLVVDRNSVSPDPG
EPQIDSYPSSEEPRKADSEQRQVRRSRRLQLLSEEITKETGKGVVIKGARKYDSDQEEFF
KVQRNVLVPTSECKDLCEPQGTLSYKPLTDLKGGDLEENEVQVSLKNSSDAAETGRSFFN
PTSSCQCSNYSSFAPDAGSQGGEILDSCSLLQPPSVTVVQTASHPTEEMPESGTTFPQDS
GHDKQNVPGEFGTEKLPMAKNVLELTKEAEDSELDTQYLRNIFRHSKRQSFSLYPTPTKV
CAVEDATSESLKIPCTDQVENKHDKYLKAENLQEKKTTAESLSRVCEKEELKTYESACVS
PVTCFVDSTECAHTGEHQEDVSQVANQGNLTPVRIGTARTENKSRSQKGEQGNEKTVSTD
AGIESELRENPIKSNRSRSDQSDTEEHIFKRTDLNTVDKMCFSSESYQAGKAKVVDSRGP
TPHFQPRSMICPAACQQKPAEFTCEVTGEKSSKRERKQVKGNEEQATQTASTGMPECSVM
EALEEPLQGNSDFTGLSETPDGLLCSDDGIEENSFSETDRRERSAVFVKRSDNALVKELH
DRNVNSKPSSQGIQRSRRRARKLQSSDEESSEDEDLPCFQTLIFGKSMSTPLQINKQGTF
VVAPSVSPVTLPHSGSHDDNNMQKMPEAALSSGCVSPSQESECSVNLFSSQSNVSEESVD
GAQELKKPLIQGHTSKQVSNENESKETFQSCDGERKRSKTNFKDECQEDPNMGANLGEAS
GYDSETSNVEDSCGPFSQGEILSTQQKNAMQNNLKKLQQEMAMLEAVLKQHGSQDYEFLP
MHRKLPHSSTEGTLGMEQMGQERGAESTSEGNSENLNRRSSKGFSANDFHVMPSDCLNSK
IKELAKERSLELLLPSSKSRLLKRPDSEKGLQCDNVLKNTAPSGKTKPVQEAVPEYNQCQ
LEAENADEQESGTRLNSASVLSNLSGNVTRSPNNSSSSVRLLNPRTAEATSRSVVAQSAK
KSSAEECKSKRSVCFPVPVLQNAAGTDNATSLPVTNRKEMSIVASGLNKSEHLVVQKFAR
KTHSTLCNHITEETTHVIMKTDKELVCERTLKYFLGIAGRKWVVSYQWVIQSFKEGRILD
EENFEVRGDVINGRNHQGPKRARQSLTEKIFKGFEICCYGPFTDMTTEHLEWMVELCGAS
VVKQLHLFTHTANSTAVVVVQPDAWMENTNYRAIQQENNVAMVTREWVLDSVACYECQEL
DAYLVS
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcagtgattgctattggagatgtacaaaatgtgctttcagctatgcagaag
aacttggagtgcccaatatgcttggatgtggtaaaagagcctgtttcgacaaaatgtgat
cacatattctgcaggttctgcatgttcaaactcctcagcaaaaagaaaaaaggtgtgaca
cagtgtcctctgtgtaagactgaagttaccaagagaagtctgaaagaaaattccagattt
aagcaactaattgaaggattgttggaaactatccatgcgtttgagcttgacactggagta
aaatttttaaacagtcatcactttcctaaaacatccacagaagccactgttgctgagttc
ctctgtaaagaaagttcagtcatccaaagcaagggtttcagaaacaggaaaaaaaatgct
aaagaaaatggacaagaaaactgcaccttgcaggaagctaatgtggatacacggcttaca
gataccagggtcaaaaggtgttccctgagaaacaaaacccagaaatgcgcctctgaaaaa
ggggtttatatagagtttggttctgattcatctgaagagctttttaaacaggcaagcaat
actgggttagaagacaaagaagcacttcagatttcatctcaagaaaagctagaagaactt
aagagtgctgagaaggggaatgaatattcttgcaatacacagcctgacaagctgggtgct
gaagaagtaattctaccaaatgtcagaggtgaaagtgatttctcgaaggaaggcttgaac
aagaaaagcactcggagcatcactgaatatgccaaacctggccaagtgaatatgactgaa
taccggagttctcctttaaatgttcttgctgtagacctgctcacagagcagtgtgacaga
ataggtaatgccagtcccttaagcaacagggacacatctttctttaagcacacagaagaa
atggctgcagagcaaactcagtgcaatactgaaagcaaagagtttgacttaaaagatagc
tcaaagagcaggttggataaaagcaaggaaatagatactgttgtacaaagtgtggaagct
gtggaaatgcacgaacctgagaatgattctgcccatgaaaaagaacctcctctggagaaa
ctacttcagccggagacacttcactgtgctaccgtgaatcaagtctctaggaagagactg
aagcgaagcattcagaaagtcaatgaatggttttcaaaaagcaatgaaactctgtcttcc
agttcttcccaggatgattctgctggagcaactgatgtttcaggtgaaggagatacatgt
ttatcagataaagattcctgtatttcagaaaagactgaccctatggtagactctatggaa
attgcagtggttgaaggaaacaagagaaggtcaaaacaaacagcagatagcatcaaagac
aaaatatttgggaaaacatacaagagagagaggaggtcaaatgcccctattatcttgaga
gacattttacctactacaaaaaaggaagaagtgacggttgataagaaatgcttgaataat
tccagtaaaggcggactaaaacgaaaaaggaagactgcccgtgtcctgcaacctgaagat
ttcattcagaaaaaagatacagaagaggcaggtggatgccctcaaagcgttaaccggtgc
cttgaagatgctgaaaagaaaagatgtgatgaaagttctgctgttagtgagagtcacttc
tctgagaatggagaggataatgcaccagcagaaacggaggaaggaggaggaggatccata
tggaaaaaagctactgaaaaggtgactggcaagcactgtgacagggaactagaactgaat
agctctgatcagaaaagcactaaaaaaagttctgcagcaaaaaaatgcaggcgttctact
agaaccatgtgtgctctgcagttagtagtggatagaaattctgtttcccctgatccaggt
gagccacagattgatagctatccaagcagcgaagaaccaaggaaagctgattctgagcaa
agacaagtcaggcgcagcaggaggcttcagttactttctgaagaaattacaaaagaaaca
ggaaaaggagtagtaattaaaggagcaagaaagtatgacagtgatcaggaagagttcttt
aaagtccaaagaaatgtgttagttcccacttctgaatgcaaagacctgtgtgagccccag
ggtacgttaagttacaagccactcactgatctgaagggtggtgatctggaagaaaatgaa
gtacaggttagtctaaagaattcatctgacgccgcagaaactggaagaagtttcttcaat
cctacatcttcatgtcagtgttcaaactatagttcctttgcacctgatgcaggttctcaa
ggaggcgaaatacttgatagctgttccctcctacagcctccttcagtgactgtcgtgcaa
actgcttcccacccgactgaagagatgcctgaatcaggtactactttcccccaggatagc
ggacatgataaacaaaatgttccaggggaattcggaactgaaaagttgccaatggctaaa
aatgttttggaattgacgaaggaagctgaagatagtgagttagacacacagtatctgcga
aatatatttaggcattcaaaacgccaatcatttagcctttatcctacacccacaaaagtg
tgtgcagtagaagatgccacttctgaatctttaaagataccatgtactgatcaggtagaa
aataagcacgacaaatatttaaaagcagaaaacttgcaagaaaagaaaacaactgctgaa
agcttgagtagggtttgtgagaaagaggagcttaagacctatgaatctgcttgtgttagt
cctgtgacttgctttgtcgacagtactgaatgtgcgcacacaggggaacatcaagaagat
gtttcacaggttgcgaatcaagggaatctgacgccagtaagaattggtactgctaggact
gaaaacaaaagcagatcacaaaaaggagaacagggaaatgaaaagacagtgtcaactgac
gcaggaatagaaagcgagctgagagagaatccaatcaaaagtaacagaagccgaagtgat
cagagtgatacagaagagcacattttcaaaagaactgatttaaacacagtcgataaaatg
tgcttcagttcagaaagctatcaagcaggaaaagccaaagttgttgacagcagaggacca
acaccacattttcagcccagatcaatgatttgtcctgcagcttgtcagcaaaagcctgct
gaattcacctgtgaagtcactggggaaaaaagcagcaaaagagaaagaaaacaagtaaag
gggaatgaggaacaagcaacccaaactgctagcacagggatgcctgagtgttcagtcatg
gaggctctagaggaaccccttcaagggaacagtgattttacaggtttgtctgaaaccccc
gatggcttactgtgctctgatgacggtattgaagagaacagcttttctgaaaccgacagg
agagagagatctgctgtgtttgtaaaaagaagtgacaatgccctggtaaaagaactgcac
gatagaaatgttaattctaagccaagttctcaaggtattcaaagatctcgaagaagagcg
cgaaaattgcaatcttcagatgaagaatctagtgaggatgaagatttaccatgttttcaa
actttaatatttggcaaatcgatgagcacacctttgcagatcaataaacaagggacattt
gtggtagcgccctcagtaagtcctgtcacattgcctcacagtggaagccatgatgacaat
aatatgcagaaaatgcctgaagctgccctaagtagtgggtgtgtttcaccaagccaggag
tcagaatgctctgtcaacttgttttcttcccagtccaatgtgtctgaagaatcagttgat
ggagcacaagaactcaagaaacctttaatacaaggtcatacatccaaacaagtgagcaat
gagaatgagagtaaagaaacttttcaaagttgtgatggagagcggaagagaagcaaaact
aacttcaaagatgaatgccaggaagacccaaacatgggagccaatctaggtgaagcatct
ggatatgacagtgaaacaagtaatgtagaagattcatgtggaccgttctctcagggtgaa
atccttagtactcagcagaagaatgctatgcaaaataatctaaaaaaacttcagcaagaa
atggctatgcttgaagcagtgctgaagcagcatggaagtcaggactatgaatttctacct
atgcataggaaactgccacattccagtactgaaggaacacttggaatggaacaaatggga
caagaaagaggggcagaatcaacctcagaaggaaattctgaaaatcttaatcgcagaagt
tcaaagggattttcagccaatgatttccatgttatgccaagtgattgtctcaacagtaaa
atcaaagagttagcaaaagaaaggtctctagaattgttgcttccatcttctaaatcccgt
ttgttaaagagaccagattcagagaaaggccttcagtgtgacaatgttctgaagaacaca
gctccttctggaaagacaaaacctgtgcaggaagcagtgccagaatataatcagtgtcag
cttgaagcagaaaatgcagatgagcaagaatctgggaccaggctaaacagtgcatctgtc
ttatcaaatctctctggaaatgtgaccaggagtccaaataactcttcctcttctgtaagg
cttcttaatcctcggactgcggaagcaacgagtcgttctgttgtagctcagagtgctaag
aaaagctctgctgaggaatgtaaatcaaagagaagtgtgtgttttcctgtacctgttctg
caaaatgcagctgggacagacaatgctacaagtctacctgtgactaacaggaaagaaatg
tcaattgtggcatcaggtctgaataaaagtgaacatttggtggtccagaagtttgccaga
aaaactcacagcactttatgtaaccacattactgaagaaacaacccatgtcataatgaaa
acagataaggagctcgtgtgtgaacggacactgaagtactttctgggtattgcaggaaga
aaatgggtagttagttatcagtgggtaattcagtcttttaaagaaggaaggatactggat
gaggagaactttgaagttagaggagacgtaatcaatgggagaaaccaccaaggtcccaag
agggctagacagtctctaactgaaaagatctttaaaggctttgagatctgctgctatgga
cctttcactgatatgactacagaacatctagaatggatggtggagctttgtggtgcctct
gtagtgaagcagcttcatctgttcacgcacacagcaaattctactgctgtcgtggttgtg
cagccagatgcttggatggaaaacacgaattacagagcaatccagcaagagaacaatgtt
gccatggtgactcgggagtgggtattagacagcgttgcctgctatgagtgccaggagttg
gatgcttaccttgtgtcctaa
DBGET
integrated database retrieval system
