Larus michahellis (yellow-legged gull): 141742503
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Entry
141742503 CDS
T11135
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic04115
p53 signaling pathway
lmic04145
Phagocytosis
lmic04148
Efferocytosis
lmic04350
TGF-beta signaling pathway
lmic04510
Focal adhesion
lmic04512
ECM-receptor interaction
lmic04518
Integrin signaling
lmic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
141742503 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141742503 (THBS1)
04518 Integrin signaling
141742503 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
141742503 (THBS1)
04148 Efferocytosis
141742503 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
141742503 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
141742503 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
141742503 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmic04131
]
141742503 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lmic00536
]
141742503 (THBS1)
Membrane trafficking [BR:
lmic04131
]
Endocytosis
Phagocytosis
Opsonins
141742503 (THBS1)
Glycosaminoglycan binding proteins [BR:
lmic00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141742503 (THBS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
VWC2L_2nd
EGF_3
cEGF
TSP1_ADAMTS
Laminin_G_3
TSP1_CCN
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
141742503
NCBI-ProteinID:
XP_074441073
LinkDB
All DBs
Position
4:complement(55421031..55437176)
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AA seq
1176 aa
AA seq
DB search
MGPTAAVFLLLVLSTAEAKRTAESRSDDNSVFDLFELIGFNRKGAGRRAPGVYLVKGPES
SSPAYRIEDASRIPAVPDSKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLSVEQKDGSG
HVFSLVSNGKAGTLDLSLSGDGKQQLVSVEDALLATGHWKNITLFVQEDRAQLYVGCEKM
ENAELDIPIQNIFSRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCSS
STSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTTLQ
DRVRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRKVSCP
LMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCE
GSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGIITRIRLCNSPVPQLNGKPC
EGEARENKSCQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCVGE
ARGTQVCNKQDCPIDGCLSNPCFAGTTCTSSPDGSWKCGACPAGYHGDGVHCQDIDECKE
VPDACFVFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMANKQVCKPRNPCTDGT
HDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCK
KDNCPNLPNSGQEDYDKDGIGDACDNDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGDRC
DNCPYNHNPDQTDTDNNGEGDACAVDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQCD
NCPLEHNPDQEDTDSDRIGDQCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDAC
DHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDHDNVPDIDDICPENVDISE
TDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFI
NTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPGE
HLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMAD
SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggggccaacggctgctgtcttcctcctcctcgtgctcagcaccgcggaggccaagcgc
accgcagagtccaggagtgacgataacagcgtctttgatctctttgaactcatcggcttc
aatcgcaagggagctgggcgccgggcccccggggtatacctggtgaagggaccggaatcc
tccagccctgcttaccgcattgaagatgccagtcgcatccctgctgtccctgactccaag
ttccaagacttactagatgccatccatgctgagaagggcttcatcctcctggccactctc
cggcaagccaagaagagtagaggcacactgctgtccgtggaacagaaagatggctctggt
catgtcttcagtctagtatcgaatggcaaggcaggcaccctggacctgagcctttctggt
gatggcaagcagcagttagtgtcggtggaggatgccttgctagctacaggacactggaag
aatatcaccctgtttgtgcaggaggaccgggctcagctctatgtagggtgcgagaaaatg
gagaatgctgaactggacatccccatccagaacatcttcagtagggacctggccagcagt
gccaggctccgtatcgccaaagggggagtcaatgacaacttccagggactgctgcagaat
gtgcggtttgtgtttggaacaactctggaaactatcctgaggaacaaaggctgctccagc
tccactagtgcaatcattactttggacaaccccatcaatggttccagcccagctatccgc
actaattacattggccataaaacaaaggacatccaagcagtctgtggtttttcctgtgat
gaactaacaaatatgtttgtggaactgcaagggctccggtccatggttacaacacttcaa
gacagagttcgcaaagtgactgaagaaaatgaactgattgccaaagtggtccagatcact
cctggagtatgcattcacaatggcatcttgcacaaaaataaagaggagtggactattgac
agctgcactgaatgtacctgccagaactctgccactatatgccggaaagtgtcctgtcct
ctcatgccttgttccaatgccactgtgcctgatggagagtgctgcccccgatgctggcct
agcgactacgcagatgatggatggtctccttggtctgaatggacttcatgttctgtgacc
tgtgggaatgggattcaacagagagggcgatcctgtgacagtctcaataaccgctgtgaa
gggtcttctgtacagactcggacctgccaccttcaggagtgcgataagaggtttaaacag
gatggtggctggagtcactggtcaccatggtcatcgtgctctgtcacttgtggcacgggc
atcatcactagaattcgtctgtgcaactctccagtaccgcagctgaatggcaaaccttgt
gagggtgaggcaagagaaaacaaatcctgccagaaagatccttgcccaattaatggcaac
tggggaccatggtctccatgggatgcttgcacagtgacatgtggaggaggacttcaaaaa
cgtagccgtctctgcaataaccctgagcctcagtatggtgggaagacatgcgtaggtgaa
gctagagggactcaggtctgcaacaaacaggactgtccaattgatgggtgtctgtccaat
ccctgctttgcagggactacgtgtaccagctcccctgatggttcctggaagtgtggtgcc
tgtcctgctggctaccatggtgatggtgtccactgccaagatattgatgagtgcaaagag
gttcctgatgcctgctttgtcttcaacggagtgcacaggtgtgagaatactgaacctggg
tacaactgtctgccttgtccaccgcgtttcactgggacacagccattcggtcgcagtgtt
gaggatgccatggctaacaaacaggtctgcaagccacgtaatccatgcacagatggaaca
catgactgcaacaagaatgccaaatgcaactaccttggccacttcagtgaccccatgtat
cgttgtgaatgtaaaccaggctatgctggcaacggcataatctgcggagaagatactgac
ttggatggatggccaaatgagaaccttgtttgtgttgccaatgccacttaccactgtaaa
aaagataattgccctaatctgcccaactctgggcaggaagactacgataaggatgggatt
ggtgatgcctgtgacaatgatgacgatgatgatggtattcctgatgaccgggacaactgc
ccgttcatctacaacccacagcagtatgactatgacagggatgatgttggtgaccggtgt
gataactgcccctacaatcacaaccctgatcaaactgacactgacaacaatggagaagga
gatgcctgtgcagtggatattgatggagatggggtccttaatgaaagggacaactgccaa
tatgtctacaatgtagaccagagggatacagacttggatggtgtgggagatcagtgtgat
aactgtccactggaacacaatcctgaccaggaagacactgattctgaccgcataggtgat
cagtgcgacaataaccaggacatagatgaagatggccatcaaaataatcttgataactgc
ccctatgtgcccaatgccaatcaagctgaccatgacaaggatggaaaaggtgatgcctgt
gaccatgatgatgacaatgatggtatccctgatgacaaagacaactgcagattggttgcc
aacccagatcaagctgattctgatggtgatggacgtggagatgcttgcaaagatgacttt
gaccatgacaatgtgccagacatagatgatatctgccctgaaaatgtggacattagtgag
actgatttcagaagatttcagatgattcccctggatcccaaaggaacatcccaaaatgat
ccaaactgggtggttcgtcaccagggtaaagaactggttcagacagttaactgtgaccct
ggccttgcagttggttttgatgaattcaatgctgtggacttcagtggcaccttcttcatc
aatacagaaagggatgatgattatgctggctttgtatttggctaccaatctagtagtcgt
ttctatgttgtcatgtggaagcagatcacccagtcttactgggactccacaccaactaaa
gctcaaggctactcgggtctctccatcaaagttgtgaattccaccactggcccgggagaa
caccttcgtaatgctctgtggcacacaggaaacactcctggccaggtgagaactctgtgg
catgaccctcgtcacataggctggaaagacttcactgcatacagatggcgccttagccac
agaccaaagaccggttacatcagggttgtaatgtatgaagggaagaaaatcatggcagac
tcaggacccatttatgataaaacctatgctggtggtcggctaggattatttgtcttctct
caagaaatggtgttcttctcagatcttaaatatgaatgcagagatccataa
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