Larus michahellis (yellow-legged gull): 141748636
Help
Entry
141748636 CDS
T11135
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
lmic Larus michahellis (yellow-legged gull)
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmic01009
]
141748636 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmic04040
]
141748636 (TRPC5)
Protein phosphatases and associated proteins [BR:
lmic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141748636 (TRPC5)
Ion channels [BR:
lmic04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
141748636 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
DUF1340
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
141748636
NCBI-ProteinID:
XP_074457136
LinkDB
All DBs
Position
9:36985217..37091853
Genome browser
AA seq
989 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAEAELSAEEKAYLSAVEKGDYASVKHALQEAEIYYN
ININCMDPLGRSALLIAIENENLEIMELLLSHSVYVGDALLYAIRKEVVGAVELLLNYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKRFAKDLLDQARSSRELEIILNHRDDQSEELDPQKCHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWAVKLLTCVTIGLLFPVLSVAYLIAPKSRLGLFI
KKPFIKFICHTGSYLTFLFMLLLASQHIVRTDLHMQGPPPTIVEWMILPWVLGFIWGEIK
EMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETSASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGATLPPP
FNIVPSPKSVWYLCKWIHNQLCPGNDSDNEQKRHENLKTFTERHADNLIQNQHYQEVIRN
LVKRYVAAMIRTSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPQRRSYSTSSTEVS
QKDEANEDGAGEKSKAKSVSFNVANKKKDFNVSALIKTMSGINMVEEKPKSNGISKRSFV
RNGNRVQRLSSSKKESFKRLGLLFSKMNGHVPEPNSEPMYTISDGIIQPHYMWKDIKYSQ
IDKEREENCSKSEINLNEVDYSGNTSLTGQSKECPVVCTSSLHCASSICSSNSKLIDSSE
DVFDSWGEACDLFINQWKDGQEDHVTTRL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctatactacaaaaaggtaaactattcaccgtacagagatcggatcccatta
cagatcgtgcgagcagaggcagagctctcagcggaagagaaggcctacctcagcgctgtg
gagaagggggactatgccagtgtgaaacatgccttgcaagaggcagagatctactacaac
atcaatattaactgtatggatcctcttggtcgcagtgcccttttaatagccatagagaat
gaaaatctggagatcatggagttgcttttgagccacagtgtgtatgtgggagatgctctg
ctgtatgcaatacggaaagaggtggtgggagctgtggagctgctgctgaattacaggaag
ccgagtggtgaaaaacaggttccaaccttgatgatggacacacagttttcagaattcact
ccagatatcaccccaataatgctggcggctcacaccaacaactatgaaatcatcaaactg
cttgtccaaagacgggtaacaattccacgcccacaccagatcagatgcaactgtgtggaa
tgtgtctccagttcagaggtagacagcctgaggcattccaggtcaaggctgaacatctac
aaagccttagccagcccatcattgattgccttatcaagcgaggaccccatcttgacggcc
ttccgactgggctgggagttgaaggagctcagcaaagtggaaaatgagttcaaggctgaa
tatgaagagctttcacagcagtgcaagcgttttgctaaggaccttttggatcaagcacgg
agttcccgagaattggagatcattctcaatcacagagatgatcaaagcgaagagttggat
ccacaaaaatgtcatgatttggcaaagctaaaggtagcaataaagtatcaccagaaagag
tttgttgctcagccaaactgccagcagctactagcaacactttggtatgatggttttcca
ggatggaggcggaaacactgggcagtaaaactcttgacctgtgtcaccattggactgcta
tttcctgtgctatccgtggcatatctgattgcaccgaagagcaggctgggactgttcatt
aaaaagccatttataaagtttatctgccacaccggctcttacctaaccttcctcttcatg
cttctgctggcatcgcagcacatcgtcaggactgaccttcacatgcagggaccacctccc
accatcgtggagtggatgatcctgccctgggttctaggttttatctggggagaaatcaag
gaaatgtgggatggtggattcaatgagtatgtacatgactggtggaatctgatggatttt
gcaatgaactcgctctatcttgcaactatctcccttaaaattgttgcctacgtaaagtat
aacggttctcgtccaagggaggaatgggaaatgtggcacccgactctcattgcagaagcc
ctctttgcaatatccaacattttaagttccttgcgtctcatatccctgtttacagcaaat
tcacacctgggacccttgcagatttctctgggacgcatgctgctagacatccttaaattc
ctttttatctactgtctggtgcttctggctttcgccaatggactgaaccagctttatttt
tattatgagaccagtgcctcggaggaacccaacaactgcaaggggatccgatgtgagaaa
cagaacaatgccttctccacacttttcgagaccctccagtcactcttctggtctgtgttc
ggtctgctgaatctctacgtcaccaacgtgaaagccagacatgagttcacagaatttgtt
ggggccactatgtttgggacctacaacgtcatctcccttgttgtgttgctgaacatgctc
atagccatgatgaacaactcctaccagctcattgccgaccacgcagatatcgagtggaag
tttgcacggacgaagctctggatgagttactttgatgaaggtgccactctgccccctcct
tttaacattgtcccaagtcccaagtcagtctggtacctttgcaagtggattcacaatcag
ctgtgcccaggcaacgactctgacaatgaacagaagaggcatgaaaacctcaaaacattc
acagaacgtcacgctgacaacctgattcagaatcaacattaccaggaagtgataagaaat
cttgtgaaaagatatgttgcagcaatgataagaacttccaaaaccaacgaaggtttaact
gaagaaaatttcaaggaattaaaacaggacatctcaagttttcgctatgaagttcttgac
ctcttgggaaataggaagccccagaggagaagttactctaccagcagcaccgaggtgtcc
caaaaggatgaagcaaatgaagatggtgctggagaaaaatccaaagccaagagtgtgtct
ttcaatgtagccaacaaaaaaaaggacttcaatgtatctgctctaattaaaactatgtcc
gggatcaatatggtggaagagaagccaaaaagcaatgggatcagtaagcgctcctttgtc
cgaaatggaaatagagttcagagactttccagctccaagaaggagtcctttaagagactg
ggcctgcttttctccaagatgaatggacacgtacctgaaccaaattcagaacccatgtac
actatttcagatggaattattcagccacactacatgtggaaagacattaaatattctcag
attgataaagagagagaagagaattgttccaaaagtgaaattaacctcaatgaggtggac
tacagtgggaacacaagccttacaggacagagcaaggagtgccctgtggtttgtaccagc
tcccttcactgtgcttccagtatttgttcctctaattccaaacttatagactcgtcagag
gatgtgtttgattcatggggagaggcttgtgacttgtttataaaccagtggaaagatggg
caggaggatcacgttacaactcggctataa
DBGET
integrated database retrieval system
