KEGG   Larus michahellis (yellow-legged gull): 141749941
Entry
141749941         CDS       T11135                                 
Symbol
AFF4
Name
(RefSeq) AF4/FMR2 family member 4 isoform X1
  KO
K15185  AF4/FMR2 family member 4
Organism
lmic  Larus michahellis (yellow-legged gull)
Pathway
lmic03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lmic00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    141749941 (AFF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lmic03021]
    141749941 (AFF4)
Transcription machinery [BR:lmic03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     141749941 (AFF4)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int
Other DBs
NCBI-GeneID: 141749941
NCBI-ProteinID: XP_074460372
LinkDB
Position
11:13216469..13270977
AA seq 1183 aa
MERRDPWGAVVASRHNMNREDRNVLRMKERERRNQEIQQGEEAFPPNSPLFAEPYKVTSK
EDKLSSRIQSMLGNYDEMKDLIGDRSLQKLVGIPKPTVPSTPDEKSNQSFFGDQRHNAGS
HQSSKWTPVGPAPSTSSQSQKRSSGLQSGHSSQRGSGNNTSSSGQRHDRDSYSSSSSRKK
SQHGSEHSKPRSSSPGKPSTVSSLSSSHSRSHGNDHHSKEHQRSKSPRDPDANWDSPSRV
PSFSSGQHSNQSFPPSLMSKSSSMLQKPTAYVRPMDGQESMEPKLSSEHYCSQTHSSNVN
ELKPSSKAHLTKLKIPSQPLDASASGDVSCVDEILKEMTHSWPPPLTAIHTPCKTEPSKF
PFPTKESQQSSFGTGEQKRYNPSSKTSNGHQSKSCESNQTDMLKDDLKLSSSEDSDGEQD
CDKTVPRSTPGSNSEPSQHNSEGADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPS
QSASPEPEPPPTNKWQLDNWLNKVNSHKVSPASSVDSNIPSSQGYKKEGRDQGTGSGYAD
QSGSKDSISSTPGRDSKPAQKGSESSRGRQKSPAQSDSSTQRRTVGKKQPKKAEKTSVEE
PRGGLKIESETPVDMATNIPSNRHKAATKGSRKPNIKKEPKSSPRPTTEKKKYKASSKSA
QKSREFIETDTSSSDSDENESLPPSSQTPKYSESNRTPVKSSMEEDDSFFRQRMFSPMEE
KELLSPLSDPDERYPLIVKIDLSLLSRIPGKPYKDADAPKVEKKNVQEKHTRESQKQPSD
KSATKGKRKHKQNEDENRASESKKTKLEEKAPSGHKTSSSRESSKPSAVKEKDLLPSPAA
PVPQKDSKQEHGSRKRTVSQSSSLKSSSNLSKESGGGSKSSSSSKQKKTEGKGSGSAKEP
KEKILNNSSNCPPASAPSTESSKSRRAKLVFDDRTYSADHYLQEAKKLKHNADALSDRFE
KAVYYLDAVVSFIECGNALEKNAQESKSPFPMYSETVELIKYTMKLKNYLAPDATAADKR
LAVLCLRCQSLLYLRLFKLKKESALKYSKTLTEHLKNSYNNSQAPSPGMGSKPVGMPSPV
SPKLSPGNSGNYSSGAANPSGSGSSVTIPQRIHQMAASYVQVTSNFLYATEIWDQAEQLS
KEQKEFFAELDKVMGPLIFNSSIMTDLVRYTRQGLHWLRLDAK
NT seq 3552 nt   +upstreamnt  +downstreamnt
atggagcgccgggacccctggggagccgtcgtcgcctcccgccacaacatgaaccgtgaa
gaccggaatgtgctgcgtatgaaagaaagggaaaggcgaaatcaagaaattcaacagggt
gaagaagcctttccacctaactctcctctctttgctgaaccgtacaaagttaccagcaaa
gaagacaaattgtctagtcgtattcagagcatgcttggtaattatgatgaaatgaaggat
cttataggagataggtcgctacaaaagcttgttggaattcccaaaccaaccgtaccatca
acaccagatgaaaaatcaaaccaaagtttctttggtgatcagagacataatgctggctcc
catcagagcagcaaatggactcctgtaggacctgcacccagcacttcctcgcaatctcag
aaacggtcctcgggtttacagagcggacacagtagtcagcgcggcagtggcaataacact
agcagtagtggccagagacacgaccgtgactcgtacagtagcagcagcagtcgcaaaaaa
agccagcatgggtccgaacactccaaaccccggtcttccagccctggaaaaccatctacc
gtttcttcactgagctccagccattcgagatctcatggaaatgatcaccacagcaaagaa
catcaacgttcaaaatctccccgggatcctgatgccaactgggactctccctcccgtgtt
ccctcattttcaagtggacagcactctaaccagtcttttccaccttcactaatgtccaag
tccagttcaatgttacagaaacccactgcgtacgtcaggccaatggatgggcaggaatcc
atggaaccaaagttatcctccgaacactactgtagccagactcacagcagcaacgtgaat
gagctgaagcccagcagcaaagcgcatctcaccaagctgaaaataccttctcaaccgcta
gatgcatcagcatctggtgatgtgagctgtgtggatgaaattctcaaagagatgacccat
tcttggcctcctccgctgactgctattcatacaccatgcaaaacggaaccgtcaaaattt
ccttttccaacaaaggagtctcaacagtccagttttggcactggagaacagaaacgatac
aatccttcatcaaaaacatccaacggtcatcagtccaaatcatgtgaatcgaaccagaca
gatatgttgaaagatgacttaaaacttagcagtagtgaagacagcgatggagagcaggac
tgcgataagaccgtgccaaggagcacacctggaagtaattctgaaccttcgcagcataac
agcgaaggagcagataattcaagggatgactcgagcagccatagtggatctgaaagcagt
tcaggatctgactctgaaagtgaaagcagttccagtgacagtgaagctaatgaaccatca
cagagcgcatcccccgagccagagccaccaccaacaaacaaatggcaactggataactgg
ttgaacaaagttaattcacataaagtgtcaccagcttcttctgtggacagcaatatccca
tcctcccaaggctacaaaaaagagggacgggatcaggggacagggagtggatatgctgat
caaagcggatccaaggattcgatttcttctacaccagggcgagattccaaacccgcccaa
aagggctcagaaagcagtcgcggcaggcagaaatcgcctgcccagagtgacagctcaaca
cagaggaggactgtaggtaaaaagcagcccaagaaagcagaaaagacgtctgttgaagag
ccaagaggaggtcttaaaatagaaagtgaaaccccagtagacatggcaacaaatatacct
tcaaacaggcataaggcagccacaaaaggctccaggaaacccaatataaagaaagagccc
aaatcttcccctcggcctacaacagagaaaaagaaatataaggcttcaagcaaatctgcc
cagaaatccagggaattcatagaaacagatacctcatcctctgattcagatgaaaatgag
agcctgcctccttcatcgcaaacacccaaatactctgagagcaataggactcctgttaaa
tcttccatggaggaggatgacagcttttttcggcaaagaatgttctctcctatggaagag
aaagagcttctttcaccactcagtgatcctgatgaaaggtacccacttattgtgaagatt
gacctgagcctcttatcacgaataccagggaagccttacaaggatgctgatgcacccaaa
gtggaaaagaaaaacgtgcaagagaagcacacgagagaatcccagaagcagccatctgac
aaaagtgctacaaaaggcaaaaggaaacataagcagaatgaggatgaaaacagagccagt
gaaagcaagaaaacgaaactggaagaaaaagctccatcaggacacaagacttctagcagt
agggagtcttcaaagccaagtgctgttaaagagaaggatttactgccgtctcctgctgcc
ccggtcccgcagaaagattccaagcaagaacacgggtcacggaagaggacggtcagtcag
tcgtcatccttaaagtccagtagcaacctcagcaaggagagcggcggtggcagtaaaagc
agctcatcttctaagcaaaagaagacagaggggaaaggttctggcagcgctaaagagccc
aaggaaaagattctgaacaattcatcaaactgccctcctgcctctgctccgtctacagaa
agttcaaagtcaagaagagcaaaacttgtttttgatgataggacttactcagctgatcat
tatttacaagaagcaaagaagttaaaacataacgcagacgcattgtctgacaggtttgag
aaggctgtgtactacctagatgctgtggtgtcattcattgagtgtgggaatgcattggag
aaaaatgctcaggaatccaagtccccgttccctatgtattcagaaactgtggaattaatc
aaatacactatgaaactgaagaattacttggccccggatgctacggctgcagataaaagg
ctagcagtgctttgtcttcggtgtcaatctctactatacctaaggcttttcaaactgaaa
aaggaaagtgcattgaaatattctaaaactctgactgaacatctgaagaattcctataat
aattctcaagcaccatcacctggtatgggaagcaagcctgtcggtatgccgtctccagtc
tctccaaagctgtctccagggaattcaggaaattactcttccggggcagccaacccttca
gggagcgggtcttcggtgacgatcccccagaggatccatcagatggcggccagctacgtc
caagttacgtccaacttcctctatgccactgaaatttgggaccaagccgaacagctgtct
aaagaacagaaagagttctttgctgaactggataaagttatgggccctctgatttttaac
tcgagcatcatgacagacctagtgcgttacacccggcagggattgcattggttgcgcctg
gatgccaagtga

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