Labrus mixtus (cuckoo wrasse): 132953859
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Entry
132953859 CDS
T10666
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132953859 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmix03041
]
132953859 (eftud2)
Spliceosome [BR:
lmix03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
132953859 (eftud2)
Complex C
U5 SnRNP specific factors
132953859 (eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Roc
Ras
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
132953859
NCBI-ProteinID:
XP_060882186
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All DBs
Position
20:14993682..15006186
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AA seq
971 aa
AA seq
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MEADLYDEFGNYIGPELDSEDDDDDLDAEDRDVDEGDDDDDDEPADADEDVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKNRQFTLMEQELPATVYDMEFLAD
LMDGSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDVDLRYTDILFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSMRISDGVVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYSTDENFVVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYNEFAKRLWGDIYFNPKTRKFTKKAP
TSNSQRSFVEFVLEPLYKILSQVVGDCDTSLPRVLDELGIHLSKEELKLNIRPLLRLVCN
RFFGEFTGFVDMCVQHIPSPQEGARAKIEHTYTGGLDSDLGEAMAECDPDGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQVCTVGRLWINVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggatctgtatgacgagttcggaaactacatcggtccagagctggactctgaa
gacgatgatgatgacctggatgcagaggacagagatgtcgatgagggtgatgatgacgat
gatgatgaacctgctgatgctgatgaagatgtcccgggcatggaggtggtcctgcacgag
gacaagaagtactatcctacagcagaagaggtttacggtcctgaagtggaaactatcgtc
caagaggaagacacacaacctcttacagagcccatcatcaagcctgtgaagaacaggcag
ttcacgttgatggagcaggagttaccggccactgtttacgatatggaattccttgccgat
ctgatggacggctctgagctaatccgtaacgtcaccctgtgtggtcaccttcaccacggc
aagacctgttttgtggactgcctgatcgaacagacacatccagagatcaggaagagagac
gatgtggatctccggtacacagacatcctcttcacagaacaggagagaggcgtgggcatc
aagagtacgccggtcacaatggtcctgccagactccagagggaaatcttacctattcaac
atcatggatacaccaggccacgtgaacttctcagacgaggtcacgtcgagcatgcggatc
tcagacggtgtcgtcctcttcattgacgcagcagaaggcgtgatgctgaacactgagcgt
ctgatcaaacatgcagttcaggagcgtatggccatcaccatctgcatcaacaaggtggac
cggctcattgtggagctcaagctgcctcccacagacgcttattataaactacgtcacatt
gtggatgaggtcaatggtttgctcagcacgtactccacagacgagaactttgtggtctct
cctctgcttggaaacgtctgcttcgccagctctcagtacagcatctgtttcaccttgggt
tccttcgcgaagatctactcggacacgtatggtgacatcaactataacgagtttgctaag
aggctttggggagacatttatttcaaccccaaaacccgcaagttcacaaagaaagctccc
accagtaattctcagcgcagctttgtggagtttgtcctggagcctctctacaagatcctc
tctcaggtggtcggggattgtgacacgtctctcccaagagttctggacgagctggggatc
cacctgagcaaagaagagctgaagctgaacatcagacccttactgaggctcgtctgtaac
cgcttctttggcgagttcactggctttgtggacatgtgtgtacaacacataccgtcacct
caagagggagctagggccaagatagagcacacgtacacaggaggcctggactcggacctt
ggagaggccatggcagagtgtgaccctgatggtcctttgatgtgccacaccactaagatg
tacagcacagaggatggggttcagttccatgcgtttggcagggtgctgagcgggaccatt
caggcaggccagcccgtcaaggttttaggagaaaactacacccttgaagatgaagaggac
tcccaggtctgcactgtgggcagactatggatcaatgtagccagataccaaattgaagtg
aacagagtgcctgctggcaactgggtcctcatcgaaggttgtgaccaaccgattgtcaaa
acagcaacaatcacagagccgcgaggaaacgaggaggctcagattttcagacctctgaag
ttcaacacagcttcagtcataaagatcgcagtggagcccgtcaacccgtcagagctcccg
aagatgttggacggactgaggaaggtgaacaagagctacccgtccctcaccacaaaggtg
gaggagtctggagagcacgtcatcttggggacaggagaactctacctggactgtgtcatg
cacgacctgcgcaagatgtactccgagatcgacattaaagttgctgaccctgttgtgact
ttctgtgaaacagttgtggaaacatcatcacttaagtgctttgctgaaacaccaaacaaa
aagaacaagatcaccatgatcgcagagccgctggagaaggggctggctgaggacatcgag
aacgaagtcgtgcagatcacgtggaacaggaagaaactgggagagttcttccagacgaag
tacgactgggatctgctggctgccaggtccatctgggccttcggacccgacaccacaggg
ccgaacatcctggtagacgacaccctgccctctgaggttgacaaggcactgctgggctcc
gtcaaagacagcatcgttcagggcttccagtggggcacaagggagggacctctgtgtgac
gagcctatcaggaacgttaagtttaagatcctggatgcggtcattgctcaggagccgctc
cacagaggaggaggccaggtcatccccacagccaggagagtggtgtactccgctttcctc
atggccactcccaggctgatggagccgtattactttgtggaggttcaggctccagctgat
tgtgtgtcagcggtctacacagtcctggctcggaggaggggtcacgtcacccaggatgca
cctattccaggctctcctctgtacaccatcaaggctttcatcccggctatcgactccttc
ggctttgagacagacctgcgcacacacacacagggacaggccttcgctttgtctgtgttc
caccactggcagatcgtccccggtgaccccctggacaagagtattgtgatcagacctctt
gagcctcagcccgccccccacctggcccgagagttcatgatcaagacccgcaggcgcaag
ggactgagcgaggacgtgagcatcagcaagttcttcgacgatcctatgttgttggagctg
gccaaacaggatgtggtgctaaactaccccatgtga
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