Labrus mixtus (cuckoo wrasse): 132954727
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Entry
132954727 CDS
T10666
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b
KO
K04359
platelet-derived growth factor subunit A
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04010
MAPK signaling pathway
lmix04020
Calcium signaling pathway
lmix04510
Focal adhesion
lmix04540
Gap junction
lmix04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132954727 (pdgfab)
04020 Calcium signaling pathway
132954727 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132954727 (pdgfab)
04540 Gap junction
132954727 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
132954727 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lmix04052
]
132954727 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
lmix00536
]
132954727 (pdgfab)
Cytokines and neuropeptides [BR:
lmix04052
]
Cytokines
Growth factors (RTK binding)
132954727 (pdgfab)
Glycosaminoglycan binding proteins [BR:
lmix00536
]
Heparan sulfate / Heparin
Growth factors/receptors
132954727 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
TraY
Motif
Other DBs
NCBI-GeneID:
132954727
NCBI-ProteinID:
XP_060883362
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All DBs
Position
20:5270504..5291184
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AA seq
207 aa
AA seq
DB search
MRVALCYFLLWTTYLLATTEEVEFPQELIDRLSHSEIHSISDLQRLLDIDSVGTGNDVIE
EPKHHKYHNHHKNFSRHHGYYNGLKSSQLHSRRKRSLVEEAVPAVCKTRTVIYEIPRSQV
DPTSANFLIWPPCVEVKRCTGCCNTSNMRCHPSRKHHRTVKVAKVEYVRRRPKLKEVFVR
LEDHLECVCTSQHHVVEHSDAEPVDVR
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcgcactttgttacttcctgctgtggacgacgtacctgctggccaccactgag
gaagtggagtttccccaggagctgatagacagattgtcgcacagtgaaatccacagcatc
agcgacctccagcggctactggacattgactccgtaggtacgggaaacgatgtcatcgag
gagcccaaacatcacaagtaccacaaccatcataagaacttctcccgtcatcatggttac
tacaacggcctgaagagctcccagctccacagccgacgcaagaggagccttgtggaggag
gcggtcccggcggtgtgtaagacgcggacggtgatctacgagatccccaggagccaggtg
gatccgacgtctgccaacttcctgatatggccgccctgcgtggaggtgaagcgctgcaca
ggctgctgcaacacgagcaacatgcgctgtcacccttcccgcaagcaccaccgcaccgtt
aaggtagcaaaggtggagtacgtgaggaggagacccaagctgaaagaggtctttgtgcgg
ttagaagaccacctggagtgtgtgtgcacgtcacaacatcacgtggtggagcactcagat
gcagaaccagtggacgtgaggtga
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